Egri013876.1
Basic Information
- Insect
- Ectropis grisescens
- Gene Symbol
- -
- Assembly
- GCA_017562165.1
- Location
- chr28:8362287-8365222[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-10 1.3e-07 31.2 0.2 4 38 16 50 15 57 0.91 2 2 6.4 2e+03 -1.4 0.0 28 42 251 266 250 268 0.86
Sequence Information
- Coding Sequence
- ATGgaaccttcaactaaaaaacctCGAGGACTTTGGTCGCTTCAGCAATTACGAGCTGCAATGACTGCTGTTCAAAGAGGACTAATGTCACAACGTGCGGCGGCTGCGCGATACTCTATACCCAGAAGAACTTTGGTAAATCACTTGAAGCCTGGAAAAGTGGAAAAACAAATAGGTCGCCGTACAGTTTTAACTAAAGAGCAAGAAGATGACTTGGCGGCAAGAATCAAAAGGCTCGCCTCTATAGGATTCCCTTTAACGCCAAATGTTATTCGTCGTCAAGCCTACGTGTTTTgtgaaaaacataatatatcgAACAATTTTAGTTCAATAGCAAAGCGCGCTGGTAAAGACTGGCTAAAGTTGTTTTTAAAACGACATCCCGATATATCGAAACGCAAGGTCCAATCATCTCAAGGCAAGGTCGAAATCTTGAACCCAGGAAGGGCTCAGAAATTGAACAAACCCATTGTTTTGCAGCATTTTGCTGAATATAAGAAAATCTATGAAGAGCTAGAGCTTGGACAAAACCCACAACGCTTATACAATATGGATGAAAAAGGCTGCCGTCTAACCATTCATAATCAACCAATAGTATTAGCACAAAAAGGTGCTAAAAGAGTACATATGGTTGCACCAGAGCACGCAGAGAATGTTACAGTGGCTTgctgtgtaaatgcattaggcAGTCCAATTCCGCCAATGATATTATTCAAAGGTAAAAGGTTGAAGCCagaatttaatgataatttgcCTGCAGGATCCCTCGTGAAAATGGCAAAGAAAGGAAGCATGACTTCGACACTGTTTGTAGATTTCATACATCACTTGGGTAAATATAAAGCGGCTGGCAGGTGTCTTCTGGTTTTTGATGGCGCTTCATGTCATTTGGATTATGATGTTGTTGATGCTGCAGAGCAACACAATATTGTGTTGTACTGCTTACCATCTAATACAACTCATGAGCTTCAGCCTCTTGACAAAAGCGTGAATAAATCATTCGAGCACCATTGGGATGAAGAAGCTTTACGTTATTTATACCAAAACCCTGAGAAAAGGCTAACCAAAACTAGATTCAACTCGATTTTGAGTAAAGTTTGGTCAAAATGTATGAcccttgaaaacataataaatggGTTCAGAGCTACAGGGTTGTATCCCTTTAATCCAGCTGCAATACCAGATGAAGCATATGCACCATCTATAATGACTGAAAGACCTAAAGCACCAGAAAATTTAACGACAGAAAATAATCAAATGTTGCAAGTTGGTCGAGAACCATGCTCATTAAGAAATTTATTACAAAGACCTGTTAGAGATAGTTCAGATTCAGAGAAGACATTTTATGAAGAACAAGACAATGATCAGCCTTTACAAAAGTCACCAACTCCTGGTCCTAGTGGTATAAATTCACAGCATGCAGTGCAGAGGTCTGATGTTAATAATTTAGATTCCGACGACGGATTCTTTGGAAATCATTATTCAGGTTCACCATCTTTACTAGATCAACACGATTTATTATCGGCTGTAACTACTGGTGCAGAAGTAAAAAAACGGTTAGTTGATTACAGCTCATCAGATTCTGAACTTTCAAACCCAAATGTACCTATAGAACAAAGCAAATATGATGCAACAATAAGGCGACCGATAATTTATAGCTCTGAATCTGATACTGATATTACAGACGTACTTCTTCTTCAGCAAAAACCTCAGTATATCCGTGATGCATACAGTTCTTCAGATGATGATAATGTTGACCCTATATTAAGACTACCTACTTCCAAAAAACAGAAAACGTGTGGTAACATGTATAGCacaatttataactcagaatctgATGCATCTATTACAGAAAGATCAGTTCCTCAGCAAAAACTTTCACCTCAGTATATTCGTCATGTATACAGTTCTGATGAGGAAAATATAAACTCACAATTAAGACATGAACATACGCCCAAAAAACAGAGAACGCGTAATAAGATATACAACACAATACATGTACGTAAAGGCTCTGCAACAACAAGCGAATCAGAAGACAACTTGCCATTATCAAGCTTGGAAAAAAAAGTCGTGAAGTCCCCTTTTGGTGAATTAATTCCAACACCGAATTTTGGCGaggtgaaacaaaagaaaccaaGACGTAAAGCAATAAATTATAAAGCCCGGATAGTGACAAAAGATTTGTTTGTAGAAATGGAGAATAAAAAGGATCAGAAAAACCAAAGCTCGCGTAGAATAGAGGATAAACagccacatacaaaaaaaaataagaaagaaCAAGAATCAAAAAAGAAGACTGAAAAAAGTGTAGAAAAATCGCGCACAGTCAAGGAAAAATgtgataataaacaaaataaacaacaagAGTTAAGGAACAGAAGACAGAAACAGATACATCAAACTCGTAGCaagaaaactaaaacaaatagtgACACCCAAATAGATCCTGCTGATAAATGGTATTGTCATGCTTGTAAGACTGAAAGTCTTGAAGACATGCACCAGTGCACAAAATGCTATAGATGGTATCATGATAACTGTATGGGTTTGACAAAAGATGATATTGATTTTGAATGTCATATGTGCAACATGTGA
- Protein Sequence
- MEPSTKKPRGLWSLQQLRAAMTAVQRGLMSQRAAAARYSIPRRTLVNHLKPGKVEKQIGRRTVLTKEQEDDLAARIKRLASIGFPLTPNVIRRQAYVFCEKHNISNNFSSIAKRAGKDWLKLFLKRHPDISKRKVQSSQGKVEILNPGRAQKLNKPIVLQHFAEYKKIYEELELGQNPQRLYNMDEKGCRLTIHNQPIVLAQKGAKRVHMVAPEHAENVTVACCVNALGSPIPPMILFKGKRLKPEFNDNLPAGSLVKMAKKGSMTSTLFVDFIHHLGKYKAAGRCLLVFDGASCHLDYDVVDAAEQHNIVLYCLPSNTTHELQPLDKSVNKSFEHHWDEEALRYLYQNPEKRLTKTRFNSILSKVWSKCMTLENIINGFRATGLYPFNPAAIPDEAYAPSIMTERPKAPENLTTENNQMLQVGREPCSLRNLLQRPVRDSSDSEKTFYEEQDNDQPLQKSPTPGPSGINSQHAVQRSDVNNLDSDDGFFGNHYSGSPSLLDQHDLLSAVTTGAEVKKRLVDYSSSDSELSNPNVPIEQSKYDATIRRPIIYSSESDTDITDVLLLQQKPQYIRDAYSSSDDDNVDPILRLPTSKKQKTCGNMYSTIYNSESDASITERSVPQQKLSPQYIRHVYSSDEENINSQLRHEHTPKKQRTRNKIYNTIHVRKGSATTSESEDNLPLSSLEKKVVKSPFGELIPTPNFGEVKQKKPRRKAINYKARIVTKDLFVEMENKKDQKNQSSRRIEDKQPHTKKNKKEQESKKKTEKSVEKSRTVKEKCDNKQNKQQELRNRRQKQIHQTRSKKTKTNSDTQIDPADKWYCHACKTESLEDMHQCTKCYRWYHDNCMGLTKDDIDFECHMCNM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -