Egri004030.1
Basic Information
- Insect
- Ectropis grisescens
- Gene Symbol
- clz9
- Assembly
- GCA_017562165.1
- Location
- chr14:19628837-19630594[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-10 4.6e-08 32.7 0.0 1 35 8 41 8 47 0.94
Sequence Information
- Coding Sequence
- ATGGCACCGGTGAAAAACTATACCCCAGAGCAGATGGGCCGTGCTCTGGAGGCAGTAAGGAAAGGACAGAGTGTAAGCTCCGCAGCCAAAACATATGGGGTACCTAGAATAACTTTGTATAATAAAAGCACTGGTAAAAGTCCAGCAGAGTGCTCCATGGGCCCATCGTCAGTTTTGACAAAGGACGAAGAGTATATTTTGGTTCAATGGTTGTTTGCTATGTCAGCAAGGCACTGTCCAGTGGCGAAAGAACAGCTCCTTGATAGTGTCCAAGCTATTGTAAAATCGCATAATAAAGAAACGCCATTTACTGATGGAAGGCCAGGGCGAAAATGGTATCAGGCGTTCCTTGCACGACACCCCGAAGTGTCCGAAAGACTAGCACAAAACTTGACTACATCAAGAGAAACTGTAAATGAAAATCAAATCACTAACTGGTTTTCCGAAGTTAATGATTATGTAGTAAAAAATGGCCTTGGTGAAGTTATGAAAGATCCTACAAGAGTATTTAATACAGATGAAAGCGCCTTCTTCCTCAATCCTAGCCCTGGGCATGTTTTGGTGAGAAAAGGCGACAAAAACGTATATAGCGTTTCGGGAAATGAGAAAGAAAATTTAACTGTCCTTGTTACAGCCAATGCAGCAGGACAAATAGCCCCACCAATGGTTGTATTTGCCTATGAACGAATACCAAAACATGTTGCAGATGGTATTCCGGAGTCATGGGCCATAGGCAAATCAGAAAGCGGCTGGATGTGCAGCAGCACATTTTATGAGTTCGTCACGAATGTATTCTACCCATGgataattgaaaacaaaataaaactcccGGTAGTTTTTTTCCTCGATGGCCACGCGTCACACGTCACGAAACATTTATCGGACTTTTGTTCTGATAAGCAAATTGAAATCATTGCGCTGTATCCTAACAGTACTCACATCATACAGCCAATGGATATAGCAGTATTCCGTCCATTGAAATCATTTTGGCGAAAACATGTTCGAAAATGGAAGACCGAGAACTTGGGTCAACAAGTCCAAAAGGACAAATTCGCAATGATTTTAAAATGTGCTCTGGACGAACTCTCacctgaaactataaaaaatggaTTTCGAGCTGGTGGTTTGTTCCCGTTTGGCCCAGAATATGTAGACTTTTCAAAAATGCATGCTCATAACCGAAGATCAACAACCGCAGATAAAGATTTGACAAAACAAGACTCagattttttctttaaactgGAACAGGAGATAGTAAATGCGTTTACTCAATCAAAACTGGATCTGTATGAAAGATGTTTTTATACCTCAAGAACTGATTTAAATGACATGTTGCCTCCCGAAGACTTAACCATGTATGTGATTTGGGCCAAATACAAACAGTTGTGCCatgcaaagaaaaacaaaattgaagaaCATAAAAATCAAGAAGCTGCAACATTACAAGAACAAAGTAAGAGGCCAGATTATGACACTCGTCCTGTAGAAACATATATAACGCATCAAAATAACACCCTCATAGTCACTAACACATCTCTCGAAGATGTGCCGTCGACATCATGTGCAGCAACATTCACGGACAAAAAATTTGATGCCTTCAATGATTTACCACAGAATGAAAATAAGTCAACTGTAAATGTTGATACTATTGATATACACAAAAACCAGGAATTGATCAACCTTCCCCATAATACTCCGAATAAAAACCCACCACCGAGTAGTTTTGCAGAAGTCatgttaaaagaaaaaatattatag
- Protein Sequence
- MAPVKNYTPEQMGRALEAVRKGQSVSSAAKTYGVPRITLYNKSTGKSPAECSMGPSSVLTKDEEYILVQWLFAMSARHCPVAKEQLLDSVQAIVKSHNKETPFTDGRPGRKWYQAFLARHPEVSERLAQNLTTSRETVNENQITNWFSEVNDYVVKNGLGEVMKDPTRVFNTDESAFFLNPSPGHVLVRKGDKNVYSVSGNEKENLTVLVTANAAGQIAPPMVVFAYERIPKHVADGIPESWAIGKSESGWMCSSTFYEFVTNVFYPWIIENKIKLPVVFFLDGHASHVTKHLSDFCSDKQIEIIALYPNSTHIIQPMDIAVFRPLKSFWRKHVRKWKTENLGQQVQKDKFAMILKCALDELSPETIKNGFRAGGLFPFGPEYVDFSKMHAHNRRSTTADKDLTKQDSDFFFKLEQEIVNAFTQSKLDLYERCFYTSRTDLNDMLPPEDLTMYVIWAKYKQLCHAKKNKIEEHKNQEAATLQEQSKRPDYDTRPVETYITHQNNTLIVTNTSLEDVPSTSCAATFTDKKFDAFNDLPQNENKSTVNVDTIDIHKNQELINLPHNTPNKNPPPSSFAEVMLKEKIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00701890; iTF_00701891; iTF_00250394;
- 90% Identity
- -
- 80% Identity
- -