Egri002101.1
Basic Information
- Insect
- Ectropis grisescens
- Gene Symbol
- clz9
- Assembly
- GCA_017562165.1
- Location
- chr26:17205418-17209501[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-09 7.7e-07 28.8 0.0 1 38 25 63 25 69 0.87 2 2 0.18 57 3.6 0.0 26 40 702 716 700 717 0.92
Sequence Information
- Coding Sequence
- ATGGCACGAAATCGCATAAGAACCTATAGAAGTAACAGAAACGGCAAATCATTCAAACCGTACACTCATTACTCCGAAGAAAAACTGCAAACAGCAATCCAAGCAGTAAAAGATAACATTCTTAGTATTGGAGATGCAGCCACAACCTacgatgttccaaaaactacaCTATGGaggaagttaaataaaaaaaactgcacacAAGAAAAAGCTGGACGTCCTACTTTGTTTTCAACAACGGAAGAACGGTGTTTTGTTGAACATATAAAAACTTTATCTGAATGGGGATTCCCGTTTGACATGACAGATCTACGCATCCTCGCCCAAAAATATTTGGAGAAAATTGGCAAAGTAGCGTATGGTCTTAAAGACAATATGCCAGGGACTGATTGGGCCCGAAATTTTCTCAACAGATATAAAGATGAACTCTCAAATAGATTGGCCTCAAATATTTGTACCCAACGAGCTAAAATAACACCAAGGGTTATCGACGACTTCTTTGAAAACTACAACGAAACTGTAAAAGGCGTCTCTCCTGATTGCATCATAAATTATGATGAGACGAATTTAACCGATGACCctggaaataaaaaatatatttataaacgaGGGACCAAGTACCCAGAAAGAGTGATCAATAGCTCGAAAACAGCGGTATCTTTGATGTTTTCAGGAACTGCAGACGGTCACTTGCTTCCAATTTACGTGGTGTACAAAGCTGAACACCTGTGGGACACTTGGTTGGAGGGAGGCCCTGAAAATACCCGGTATAATCGGTCAAAAAGTGGATGGTTTGACGGAGTCTGCTTTGAAGACTGGTTTTATACAGTTATAGTGCCTTATGCAAAGTCAAAACCAGGACGTAAAGTTATTATTGGCGATAACTTATCGTCTCATTTTTCAGAACGTGTTTTGAAATCCTGCGAGGAATTGAGAATTGCTTTTGTGTGCCTACCTCCAAAGACGACTCATCTCCTACAGCCCCTAGATGTGGCATTTTACGCACCATTGAAAAACTATTGGCGAAGCATTCTTACTCAATGGAAAAAATTGGAAGGACGCAAACATAAAACGTTAGTCAAAAGCTCTTTTCCTCGACTATTgaacaaactaaaaaataaactaattgagAAACACGCTGATTCAAACAACCTCATAGCTGGATTTAATAAAACCGGCCTTTACCCCATAAACCCAGATCGTCCAAAGTCAAGGTTACCTCGAAGAGATGAGTTGTGTTCTGAACAGGAAGTTTACGAAACAACTTCCCAGGTCGTAACGGAAATGTTACAAGAAATGAGGGGTGTCATTGTTCCGGACGAGACTCTTAAACGAAAGAAGAAATGTAACGTAGCACCTGGAAAGAGTGTCACCTTAGAAGACATATCAATGATTAcgacaaatgaaaaaaatacaccGAAAAGGGGCAAAAACAAGAAACAGGTGACAAAAGCACTTGTAGATTACCCTTTGACTTCTTCTGAAGAGAGTGAAATTGATTCCGATTTGACATTTGTTGCGAGTGATGATTATAACTTACCTGGCACATCTGGCATCAAAAAAAGTGCAGTGAAGAGGAAACCGaggaaaattacaaataaaaaaatattaaaaagacaTAAAGTTGAGGTGGACAAGAAAAACGAATCTACAAAAGGAAAAGGCATTGGTAAGAAGAGCAAACCTGGTAAAGAAAATTATTTTGGAGCTATTAATACACATAGTCTCAATCCTGACACAACAAATCAATGCAAAAGTACTAAAAAGAAGAAAACTATGTCTAGGGGATCGAGTAGTGACACTAGTGTGTCAAGTATCATAAGCTTACACAGTGATTCCGATATAGCTGATATACCCGATAATGTCAATGACAGCGGTGATGAATATAATAACAGAAATTGTTCAACATACCTAAACTTTAATATATATGACGACGAAACTATCAGTGAGGATTCTGACAAAAATGAGACAGTTGACCAATCCTGTAATTCGCATATGGAATTTAACGAGACTGATCGCAAAGGAAAGAATGGAAACGACAGATCAAAAGAGAGGACCAAACTTGAAAAAACATCTGCTAGTAATAATTACGACGAGGACAATTATGACATTAACCAGGATGTGTTGGTTAGATATTACCGAAGGAAAAAGTGGACTTACTATATTGGTtacattgaaaaaataaaacctgaaaCTGAAGCATGCTATGAGATAAGGTTCTATAAGACTTGCAAGAAACCGTTGAGGTTTGTCTCTACTAAAAGGCCAGAACGTGATGATGTTCCAACATTAtctattgtgaaaaaaattcaactAACTCAAGACCCTGACAACCTCAAAGGGTTTCTTCTGTCCAATCAAGATGACGCTATATACTTTTCTTAA
- Protein Sequence
- MARNRIRTYRSNRNGKSFKPYTHYSEEKLQTAIQAVKDNILSIGDAATTYDVPKTTLWRKLNKKNCTQEKAGRPTLFSTTEERCFVEHIKTLSEWGFPFDMTDLRILAQKYLEKIGKVAYGLKDNMPGTDWARNFLNRYKDELSNRLASNICTQRAKITPRVIDDFFENYNETVKGVSPDCIINYDETNLTDDPGNKKYIYKRGTKYPERVINSSKTAVSLMFSGTADGHLLPIYVVYKAEHLWDTWLEGGPENTRYNRSKSGWFDGVCFEDWFYTVIVPYAKSKPGRKVIIGDNLSSHFSERVLKSCEELRIAFVCLPPKTTHLLQPLDVAFYAPLKNYWRSILTQWKKLEGRKHKTLVKSSFPRLLNKLKNKLIEKHADSNNLIAGFNKTGLYPINPDRPKSRLPRRDELCSEQEVYETTSQVVTEMLQEMRGVIVPDETLKRKKKCNVAPGKSVTLEDISMITTNEKNTPKRGKNKKQVTKALVDYPLTSSEESEIDSDLTFVASDDYNLPGTSGIKKSAVKRKPRKITNKKILKRHKVEVDKKNESTKGKGIGKKSKPGKENYFGAINTHSLNPDTTNQCKSTKKKKTMSRGSSSDTSVSSIISLHSDSDIADIPDNVNDSGDEYNNRNCSTYLNFNIYDDETISEDSDKNETVDQSCNSHMEFNETDRKGKNGNDRSKERTKLEKTSASNNYDEDNYDINQDVLVRYYRRKKWTYYIGYIEKIKPETEACYEIRFYKTCKKPLRFVSTKRPERDDVPTLSIVKKIQLTQDPDNLKGFLLSNQDDAIYFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00826801;
- 90% Identity
- iTF_00826801;
- 80% Identity
- -