Egri016187.1
Basic Information
- Insect
- Ectropis grisescens
- Gene Symbol
- bab1
- Assembly
- GCA_017562165.1
- Location
- chr13:15803689-15807877[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.6e-13 2.4e-10 40.0 0.0 4 45 367 408 364 408 0.93
Sequence Information
- Coding Sequence
- ATGTATCTTGGTACTACTTACGAAGAAATTTTACCAGAAGCCCAACTAAGAAAAATGGGGAGCAGCGAAGGTCAGCAAACTTTTTGTCTAAAATGGAACCACCACAAGACGAATCTTGTGGAGATCCTGGAAGCCCTCATCAAAGTAGAGACGTATGTGGACTGCACCCTCGTCGTGGACGACCAGGTGACGTTCAAAGCTCACCGGGTGGTGCTGGCCGCTAACTCGCCCTACTTCCAGTCGATCCTAGCCGACGTGCCGATGGATCATTGCAGTATTTTGTTCCCCGGAGTCAAAGACTTCGAGATGCGCGCGTTGCTAGAATACATGTATACCGGAGAAGTGAACGTAACGCAAGCGCACATCCCGAGGATCATGCGGGTGGCCGAGCAGCTGGAAGTGAAGGGTTTGTTCGATATGACGGAGATGCGGCGGCCGGGGAGCACGGAGCGGTGCGCCGGTTCGTCCCCGACGCGCGTGGTGCCGGCCGCGCCGTCCAGCGTgtccccgcccgcgcccgcgcccgcacgctggcccgcgccgccgccgcccgccgtgCCCACGCTCTCCGCCGCCTACGACTCCACCGACATGAACCCGCTCAAACGCAAGAAGCTCTCCAGCTACTTCGCCAATCGCGAGAACCGCGACTGTCACGATGCCCGCGATCCTCGCGAACCGCGCGACACCCGCGACACTCCCATCCTCCGGAACGTCCTCGCCCAGGCCTCCCCTATCGAATCGTCGCAGCCGATGTCCCTCGTGTGCCACCCCGTCAACCCGACCGTCTCTCCTCGGCTGCACTCGAACGGGTCCGCCCACGAGACAGAGCGTCCTCCTAGCCCGCAGCGCCCCTTCGACTACCGCCCTCGCAGGCTATCCTCTCGCGCCTCCTCCCCGCACTTTAACAGATCCGACCGCTCCGAAGACGCCCACTCTCCCTATACGGAACGCTCCTACGAGGATGACCACCAGCGCAGCTTCCACCCGTCCCCACCGCCGCCCAATTTCCAGCAGGACGTGCGAGCCGGCCTCGCGCCGTACGTTCCCCCGCAACAGAAGCCCGAGTGGAAACGATACAAACAATACACTAGATCAGATATCCTATCAGCGATCGAGTGCGTGAGAAACGGAATGAGCGCATTACAGGCGTCGCGCAAATACGGCGTTCCGTCACGTACGTTGTATGACAAAGTGAAGAAACTGGGGATCACGACGAGCCGTCCGATGAGTAGAGGTATCAAGAGGGAGAGCAACGGCGCCGCGTTCCCGTACGGGCTGAGCGGGACCGGCGGCGCGGAGGATGGCAGCCACCAGGCGGCGACGCCTCTCATCGACCCGTCGTTCCTGCAGCAGGCGCTGGAGGGCGCCACGCGCGACGGCGGCCGCGAGGCGCTGCACGCCATGGCGCTGGCGGCGGCAGCGCACGCGGCGCTAGCGCCCCGCTCCCCGCTAGCGCCCCCGCTCGCCACCGCACTcgccgcgctcgccgccgccGGACGAGGACCGCGTCGAGGACCTATCCGTGCCGCGCCGCCGCGACCTCGACGTGCCCGCCGGAGTCATCGTCCCGCCGCGCAACTTCGCGCTCGACTGCGGCGAGCGAGATTGAACGCGCTCGCTCGATAG
- Protein Sequence
- MYLGTTYEEILPEAQLRKMGSSEGQQTFCLKWNHHKTNLVEILEALIKVETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSILADVPMDHCSILFPGVKDFEMRALLEYMYTGEVNVTQAHIPRIMRVAEQLEVKGLFDMTEMRRPGSTERCAGSSPTRVVPAAPSSVSPPAPAPARWPAPPPPAVPTLSAAYDSTDMNPLKRKKLSSYFANRENRDCHDARDPREPRDTRDTPILRNVLAQASPIESSQPMSLVCHPVNPTVSPRLHSNGSAHETERPPSPQRPFDYRPRRLSSRASSPHFNRSDRSEDAHSPYTERSYEDDHQRSFHPSPPPPNFQQDVRAGLAPYVPPQQKPEWKRYKQYTRSDILSAIECVRNGMSALQASRKYGVPSRTLYDKVKKLGITTSRPMSRGIKRESNGAAFPYGLSGTGGAEDGSHQAATPLIDPSFLQQALEGATRDGGREALHAMALAAAAHAALAPRSPLAPPLATALAALAAAGRGPRRGPIRAAPPRPRRARRSHRPAAQLRARLRRARLNALAR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00025187;
- 90% Identity
- iTF_00634634; iTF_00634267; iTF_00635548; iTF_00205985; iTF_00206927; iTF_00207123; iTF_00206237;
- 80% Identity
- iTF_00635548;