Egri007232.1
Basic Information
- Insect
- Ectropis grisescens
- Gene Symbol
- -
- Assembly
- GCA_017562165.1
- Location
- chr17:23812373-23819546[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.1e-14 2.2e-11 43.3 0.0 3 41 44 82 42 84 0.94
Sequence Information
- Coding Sequence
- ATGGCGAGCCGGCTCGCTGCTTCCCGCGACCTTGGCTGCGGACGGAATTTGGACAGACGCGAGAATCATGACAAACAATATATGCCAAGTACATACAAACGAACAACGCATCAGCAGACATGGGACTCAGATTCAATGGAAAAAGCTATAAAAGCTGTAAGAAACGAAGAAATGGGCTTCCTCAAGGCTAGCAAAGAATTCAAAGTTCCTCGATCGACGCTCAAAAGACGTGTAAAAGGGATAAACAAAGAAGctgttgaaaATACAACAGATGTGGCCCTTGCTGAACTGGAAACACAACAGAATGAGGCCAACAAAGAGAACGAGATACCTGATAGAGGAGAGTCTCCATCAGTTCTACAAGATACCCTGGAGGAAATACTAGCAATGACACCGCCAATGTTGGATTCGCTAGCATGCACATTAACGTCGCCAATGTTAGATCACCAACCAAGCACATTCACCTCGCCAATGTTAGATCAGCAACCAAGCACATTAACCTCGCCAATGTTAGATCCACAACCAAGCACATTAACTTCGCCAATGTTAGATCTACAACCAAGCACATCTTTCGCAGTAATGCCTAAAGACTTGTTTCCGATTCCCAAAGCATtgcctaaaacaaaaaaaagtaaccAGAAAGAGAGGTCGTACAGCAATCCTAACTAG
- Protein Sequence
- MASRLAASRDLGCGRNLDRRENHDKQYMPSTYKRTTHQQTWDSDSMEKAIKAVRNEEMGFLKASKEFKVPRSTLKRRVKGINKEAVENTTDVALAELETQQNEANKENEIPDRGESPSVLQDTLEEILAMTPPMLDSLACTLTSPMLDHQPSTFTSPMLDQQPSTLTSPMLDPQPSTLTSPMLDLQPSTSFAVMPKDLFPIPKALPKTKKSNQKERSYSNPN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -