Basic Information

Gene Symbol
ARID4B
Assembly
GCA_017562165.1
Location
chr25:12463429-12500439[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-16 3e-13 50.0 0.0 1 51 323 373 323 396 0.88

Sequence Information

Coding Sequence
atgtaCCAATACcaatCCAATGAACTAATAAAAGATCGCGATATATTACCTGATCTATTTCCTGTTTTGATATTCAGTCGGAAATCTGTTCTGGACCCCAGGACCAAGGAATTGCATCTAAACATGCAGGGAGATGACCCTCCCTACTTGCCAGTTGGCACTGATGTCAGTGCAAAATACAAGGGAGCATTCTGTGAagctaaagtaaaaaaagttgtGCGAAATATTAAATGCAAATTAACCCTTAAACTGGGAGGGACTTTGACTGTAAATGATGATGTTATCAAAGGCACACTCCGTGTTGGTAGCACTGTTGAAGTGAAACAGGACCCCAAAAAGGAAGCCATGGAGGCTGTCATCACTAAGATACAGGACTGCAGCCAGTATACTGTCGTCTTTGATGATGGTGATATAACGACACTCCGGAGATCAGCGCTGTGTCTGAAGAGTGGCCGACATTTTAATGAAAGTGAAACTTTGGATCAACTGCCATTGACGCATCCGGAGCATTTCTCTACTCCAGTTATCGCTGGGAGAAGAGGAAGGAGGGGGAGAGCTCAGTCGGAGGAGAGCGACGGCGAGGGCAGCACGCGGCCCTCTAAGGCCGACTCCGCCGAGCGCGAGCCGCACGTAGGCCGCGTGGTGCTGGTGGAGGCCGCCGGGGGCACGGAGCGGCGCCGCCCGCATCAGCCCGCCTTCCCGGCGCTCGTTGTCGCGCCCACGCCGCAGATCAAGGTCAAGGAAGACTACTTAGTGCGGTCCTTCAAAGACGGACGATACTACACCGTACCCAAGAAAGAAGCCCGCGAGTTTCGAAAAGGCGGTGCCCCGCTAGAGTGGTGCGGAGTAGATGCAGCACTTCAGTACCTAAACAATGGAGTCCTGCCGCCACACTGGGATCGCGCAGCGCTGTTCAACGAGCCTCGGAACACTTCAGATGATAGCTCTGATGATGAGCCACGAGAGGAGAAGGATCATTTCGTGGCGCAACTTTACAAATTTATGGATGACCGTGGGACACCACTCAACCGGAATCCCACTATTgccaatagggacattgatcTCTATAGATTGTTCAGGGTGGTGCAAAAGTTGGGTGGCTACAACAGACATAACAAATCTCTGCAAACAAGCATACAAAAAGTTCCTACACAGTTTCGAGGACTTCTACCGCAAGTTAGGAGTTACGCTAGTGGCGCACCCGCGAGGCGCGCGCACGCCGCCCGCGGGCCGCTCGCTGATCCGCGACCGCGACAAGCAGCCCCCGCCGCCTCCTCCTCCGCCTGCTCCACGCCCACCGGGCCCACGGCGTCGCGCGGCAAGGATAAAGATTCTGATAAGAGCGAGACAGACAAGAGTGAAAAGGAAGATAAATCGGAGAAAGGCGATAAGAAAGAGAAAGTGGAGAGTGACGAAGAAGACAGCGCTGATAACCAGCCGCTTATAGCTACGGCGGCGCCCAAACTGGTAGAAAAAGAAAAGGAGAAAGAAAAAGAGAAGGAAAAGGAGCGCGAGAAGGAGAAAGAGCGAGAGAAGAGCACGTCCACGACGACCAGCGAAGAACCGCCTAAGCCAGTTGTGATCAAACCACGCTCGCAGTCCAAGGGGCGAGCGGTCACGCCGCTCAAAACGGAGCGGACTCCGAAGAGACGACCGTTATCTTCTAAAAGTGAAAGTGCAACTACTACCACATCACGTGCGTCTAGAAGACCGCAAGTTTCAACTGACAGTGATAGCTCTGGACGAGCTTCAAGATGTGGTCTCACAAAGAAACTACAAAGCCGTCGCAGTCAGAGTGCAAACTCGGCTAGTAGCGGTAATACGATAGCATCAAACAGCAGCAAACGGCCGCGCAAGAGGAAGATCACAGATTATCAGGGTCGACAACCGACGTTGAACGTGAAAGTCTACTTGAAAGTCTACTATGGACCGACGCAATCCGAGTCCAAGGTAAATTCTCGAAGCAGCAAGTCAGTCATCTCAGTATTGtccaagtgcagtgcagtgccacATAGAACATTTCAAAATGGTCTACGCGGTAATACACGTACTTTTCTACGAGACCAGACTATAGTCACATATGAGGCGAAAGTGATCGAGATTTCTCCAGAAGGTATGCTCCGAGTACATTACACTGGATGGAACACGCGCTATGATGAATGGATTAAGCCACAGAGAATCGCAGTAAATGTCTCTCAACACGAGAACAGAAACAAGAAGGGATCGAGCTTGAACAGACGCGTTAGATCGAAAAGGGTGGAAGaaTCTTCAGCACGATCTGATTCTGATACATCAGACAGCGACGAGGAAGTTAAGCGACCTCCGAAAAAATTGGACGACAAATCAAGCTCTAAGACTCCTAGGTCAAAAGACACGAAATCTAGTGACAGCAGCAGTTCCAGTAAACCTCGTAAAAGGCCTACACGTAATGTCGCGACTCCCACTAATGTCTCCCCGCCCAAGAAACCTCGTCCTAGCTCGAGCAGCCATCAAGGACGAGACTATGATCTTAACGAAATCAGATCTGAGCTCAAAGGGTTCAATACGGTTAAGCAAGAACCGGAAGAAATCAAACAAGAGCCTGTTGATAAAGATGTTTCGACGGCCGCTATTCCCCTCCCTCCGGCTCCTGCACCCGACCCCCCTCAGCCGGATAAACAAACTGAAGATGTTTACGAATTCAAAGAACCGGAACCATTTGAATTGGAATTACACGACGAAAAGAAAAAGCGCACTCATCGGATCTTTGATGACATCTCTCCGAAcaaatacacttcaacgctaTCAAAGTCACTTAGTGAAGAAATCAGTGAAGACCCCATGAGGCCCCGTCCGTCTTCTCTGAGGTCTCCATCACTATCTCCATTTAGAGACTTCGGCGGTACCCGGGAAACGGGAAGACAAAGCCCTGAAGAAGATTCGAAAGATGGGATGCTTTCGTTGGATGATGACTCATTCCACGGCGATGGCAGTTCCGGACCCACTTTCGAAGGATTTACTCCGGCGAAGAACCAAGAAACTTATTCAAAGAAGAGCAAAGTTTCAAAGCTAAGAAAACTTATAGATGATTCTCCTGATAGTCCGGCTGACGACGAACAGtcatctgatgatgaagccgAGGATGTAGCGATTAAAGAGGAAGAAGAGGAAAGAGAACCGACTCCAGTATTACCGAGTGCTGATGAATCGAAATCATCAACGTCGGATGACAAggaagaaataaaagaaactgaAGAATTGAAAGAAGTTATAGAGGAAGACACTATAATGCAAGATATACCTCCAGAAATTCTTAACATCCCCAAACCTCCTACAACGCCACCCTCACCGCACCAAGATCCGGAATTCCTGAACAAAATTGAACTacctaaaaaaattgaattgccCATAGAGGAACCGCCTAAACTGGTAGAATCTCCTGAGAAGGTTGAATCTCCCAAAAAGATTGAACAACCCAAAAAGGTAGAAATACCGAAAAAGGTTGAGCCAATCAAAAAACTTGATCCACCTAAGAAAGTAGAGTTACCAAAATTAGAAATGCCTAAAATCAGTATTAGTCCCCCTGTCATAGCTAGCGCAAGCACGGCAGCACCAGAAACTAAAGAAATTATCAAAGAAGAAACTAAAGAAGACGAAGAATTGAAACTATTGTCAATACCCCTACCTTCTTCGGAGCCGATAGATATACCGAAACTCATGACACcgaaaaaaattgaaaagttAGACCCAGAACCACTGATCAAGTGTATAATGGAACCTCCATCGAGCCCATTAATAGATACGGAAGAAGATAAATCGGAACCCGACAGTCCAGCTCGAATCGATGTTCTACCTGAACCACCACCAGGCTTCAAACTGCAATCAGAAGGTCCCAAAATTGCTGAAAAACTCCTGAAAGCGATCAGCAGCGCGAAAAGACTTTCTATGTCTCCTCCTCCAGTAGTAGAAAATCGCCCAGATACGCCCAAAACAGATCCGCTCAAACCTATCAAAATAGAAAGTAAACTTTCACCGATATGTCCTGAGCCCAGgacaaatacattaaaaactGAACCAGTAAAACCCGCGGTAAAGATTAATGACCCTGTAAAGAAACCGGAAGATTCAATATTTGGGGAACCCGTTAATTTATTGGACGTGAAACGAGACGTATTAGACATCAAGAAAAAGTCTGAAGAACGAACCCCACCGAGGTTACAAAGTCCTCGTTTGCAAAGTCCACTAAATATTTTAGAACGGCGAAAGAGCGTAGCGGACCTACCGTTGAGCGTGCCTGGGAAGAACAATAAAGTTCTAAGTGATACTATTCAGAAATTGTCAAGTCAAATTAATCAGGCGGCGGCGTCGGTCGCTGCCATACCTTTACCGGCCTTCTCTGCTGAGGACCGAAGCGAAAGCAGTGACTCGGATGACTCTGACAGAAGGTTAATAATCGACAAGCTGTCAATAGAGGAGTGGGGCAGCGGCGGGTCTTCCGAAGCGTCGCGTGCGGCCGCGAGCGGCGCCGCGGCGGGGCTGCGCGCCTTGCACGCGGAGAAGTCGGCCGGCGAATGGAGCGCCGGCGAGTCGCTCCTCATGCTCGAAGATGCCTGCAAAAACGAGAGGAAACACAGTGCCAGCGTGGTCGTGGCGGGTAGCGGGCGCGGCcccgcggcggcggccggcgcgagCGCGCCGTGCGTGCCGCCGCCGGAGGAGGACAGCAACCTGTCGCTGCTGCTCTGCGAGGAGACCATCCCCGGCTCGCCGGCGCCCGACGCAGAGCCCGCGCCGCCTCCGCATCACCACAGGACGCCCTTCGCGGTAGTTctcgcgcgggcgcgggcggcgcggcggccggcgacgGCGGGggagggcgcgggcggcgcggggtGGAGCCGCGGGCGCGCGCTGTTCGACAACACGCCGCCGACCACGCCCGACTCCAGCCTCGACGCCTCGCCTCACAGaGAACGTCGTATATCTGAGCGCGACAGTCCGTCAGAGCGCAAAGATGACGACGACGAGAGTCGACCCAACGATGCCGCGATGGACATCGACAAATCAAATCACGGTGGCATATTCACGGGCGGCCGGTCGCGCAAGGCCTCCGAGAGCtcggcggccggcgccggccgcggccgGAGGCGCAGGCGCGACACGGACGACCACGCGCACAACCACATCTCTAATGCGCACTCCACTAAGTACAACTTCTTTGTGGAACTGGACCCGTCCTGGGATTGCCAGACGCGCATCAATCTGCTGACGTCACGGCTCGCAGACCTGCGTAAGGCGTACCATGCCGTCAAAGCTGACCTGGCGGCCATCGACCGCCGGCGCAAGAAACTGCGCCGGAAAGAGAGAGAGGGCCTGAACTAA
Protein Sequence
MYQYQSNELIKDRDILPDLFPVLIFSRKSVLDPRTKELHLNMQGDDPPYLPVGTDVSAKYKGAFCEAKVKKVVRNIKCKLTLKLGGTLTVNDDVIKGTLRVGSTVEVKQDPKKEAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFSTPVIAGRRGRRGRAQSEESDGEGSTRPSKADSAEREPHVGRVVLVEAAGGTERRRPHQPAFPALVVAPTPQIKVKEDYLVRSFKDGRYYTVPKKEAREFRKGGAPLEWCGVDAALQYLNNGVLPPHWDRAALFNEPRNTSDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRNPTIANRDIDLYRLFRVVQKLGGYNRHNKSLQTSIQKVPTQFRGLLPQVRSYASGAPARRAHAARGPLADPRPRQAAPAASSSACSTPTGPTASRGKDKDSDKSETDKSEKEDKSEKGDKKEKVESDEEDSADNQPLIATAAPKLVEKEKEKEKEKEKEREKEKEREKSTSTTTSEEPPKPVVIKPRSQSKGRAVTPLKTERTPKRRPLSSKSESATTTTSRASRRPQVSTDSDSSGRASRCGLTKKLQSRRSQSANSASSGNTIASNSSKRPRKRKITDYQGRQPTLNVKVYLKVYYGPTQSESKVNSRSSKSVISVLSKCSAVPHRTFQNGLRGNTRTFLRDQTIVTYEAKVIEISPEGMLRVHYTGWNTRYDEWIKPQRIAVNVSQHENRNKKGSSLNRRVRSKRVEESSARSDSDTSDSDEEVKRPPKKLDDKSSSKTPRSKDTKSSDSSSSSKPRKRPTRNVATPTNVSPPKKPRPSSSSHQGRDYDLNEIRSELKGFNTVKQEPEEIKQEPVDKDVSTAAIPLPPAPAPDPPQPDKQTEDVYEFKEPEPFELELHDEKKKRTHRIFDDISPNKYTSTLSKSLSEEISEDPMRPRPSSLRSPSLSPFRDFGGTRETGRQSPEEDSKDGMLSLDDDSFHGDGSSGPTFEGFTPAKNQETYSKKSKVSKLRKLIDDSPDSPADDEQSSDDEAEDVAIKEEEEEREPTPVLPSADESKSSTSDDKEEIKETEELKEVIEEDTIMQDIPPEILNIPKPPTTPPSPHQDPEFLNKIELPKKIELPIEEPPKLVESPEKVESPKKIEQPKKVEIPKKVEPIKKLDPPKKVELPKLEMPKISISPPVIASASTAAPETKEIIKEETKEDEELKLLSIPLPSSEPIDIPKLMTPKKIEKLDPEPLIKCIMEPPSSPLIDTEEDKSEPDSPARIDVLPEPPPGFKLQSEGPKIAEKLLKAISSAKRLSMSPPPVVENRPDTPKTDPLKPIKIESKLSPICPEPRTNTLKTEPVKPAVKINDPVKKPEDSIFGEPVNLLDVKRDVLDIKKKSEERTPPRLQSPRLQSPLNILERRKSVADLPLSVPGKNNKVLSDTIQKLSSQINQAAASVAAIPLPAFSAEDRSESSDSDDSDRRLIIDKLSIEEWGSGGSSEASRAAASGAAAGLRALHAEKSAGEWSAGESLLMLEDACKNERKHSASVVVAGSGRGPAAAAGASAPCVPPPEEDSNLSLLLCEETIPGSPAPDAEPAPPPHHHRTPFAVVLARARAARRPATAGEGAGGAGWSRGRALFDNTPPTTPDSSLDASPHRERRISERDSPSERKDDDDESRPNDAAMDIDKSNHGGIFTGGRSRKASESSAAGAGRGRRRRRDTDDHAHNHISNAHSTKYNFFVELDPSWDCQTRINLLTSRLADLRKAYHAVKADLAAIDRRRKKLRRKEREGLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00634093;
90% Identity
-
80% Identity
-