Basic Information

Gene Symbol
Kdm5
Assembly
GCA_017562165.1
Location
chr27:2624411-2686417[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.6e-24 3.6e-21 75.4 0.0 2 89 101 184 100 184 0.93
2 2 4.2 9.6e+03 -2.9 0.0 45 69 1383 1410 1371 1423 0.69

Sequence Information

Coding Sequence
ATGGGAAAATGTGACGAAGCTAATGTCGAAGTTAGCATGGGGGACTCGGCGTCCCCCATGAAACCTGACAATTTTACATTCACGCCGCCTCCGGAGGCTCCTGTGTTCGAGCCGACACCTGAGGAGTTCCTGGACCCGTTGGCTTACATCAGCAAAATAAGACCCATCGCTGAGAAGTCTGGGATTTGCAAGATAAAACCACCAGCGCATTGGCAGCCCCCCTTTGCAGTGGATGTAGACCGTCTGCGGTTCACTCCGAGGATACAGCGACTCAATGAACTAGAGgCTATAACTCGCGTGAAGCTGAACTTCCTCGACCAAATCATCAAGTTCTGGGAGCTGCAGGGGTCCGTGCTGAAGATACCGACTGTCGAGAGGAAGCCTCTGGACCTCTACGCCCTCCACAAGATCGTCAAGGAAGCAGGAGGATTTGAAGTCTGCTCAGCGGAACGCAAGTGGTCAAAGATCGCTCGCCGCATGGGCCACCCCCAGGGGAAAGGCATCGGGTCAATACTGAAGAGTCATTACGAACGCATTCTCTACCCGTATGACGTGTTCAAGAGTAATGGGGCGGGGCATGATAATAAGGACACTAAAATCGAAGTGAAATCGGAGCAGACGCCCGAGAAGCCGACTAACCCGAGCACGCGGGCGCGCTCGGCCTCCAAGTGCCCCGGGCCGGCCGccacgccgccgcccgcgcgccgctACAAGGGCGGGGAGCCGGAGCCGGCCGCCGAGGGGTCGCACACCGAGGGGGCGCTGCCCGGGAACAACGACAAGGGGCTGAAGACGCCGGTGAAAGAGGAACCGAACCTCGAGACTAGACGCAGTCCCCGGGAGAATAAGTGGATGTCTGCGGGCGGCAGCTGCGGCGCGCGGTCGCGGGTGACGCGCTCCACGCGGCTGCGCGAGCACCGCATGTCCAACATGACCGTGTCGGTGACGCCCGCGCCCgtcgcgcccgcgccggcgccgcaccCCGACGACCCGTGTGGGCGTGTGCCGGCCGAAGCGGCGCTCCCCGGCGCCACCGACCCGCTGGCGAAGTACATGTGCCGCGTGTGCGGGCGCGGAGACGTGGAGGAGCAGATGCTGCTGTGCGACGGCTGCGACGACTCGTACCACACGTTCTGCCTGCTGCCGCCGCTCGCCGACGTGCCCAAGGGCGACTGGCGGTGCCCCGTCTGTCTAGCTGAAGAGGTATCGAAGCCGACGGAAGCGTTCGGTTTCGAGCAAGCGTCGCGCGAGTACACGCTACAACAGTTCGGCGAGATGGCCGATCAGTTCAAATCTGACTATTTCAACATGCCTGTACATaTGGTACCCACGTCGACGGTGGAGAAAGAGTTTTGGCGTGTGGTATCTTCCATCGACGAGGATGTCACAGTCGAGTACGGGGCCGACCTGCATTCCATGGACCACGGATCTGGTTTCCCAACGAAGTCGTCTGCGCACCTGTACCCCGGGGAGCAGCAGTACGCGGACTCCAGCTGGAACCTGAACAACCTGCCGGTGCTGGAGGGCTCCGTGTTAGGACACATCAACGCCGACATATCCGGCATGAAGATTCCATGgctgtatgtaggtatgtgctTCGCAACGTTCTGTTGGCACAACGAAGATCACTGGAGCTATTCTATCAACTATCTACATTGGGGCGAGCCCAAGACTTGGTACGGAGTGCCGTCATCAAAAGCGGAACAGTTCGAGGCAGCGATGAAGGCGGAAGCTCCTGAGCTGTTTCAGCTGCAACCCGACCTGCTGCACCAGCTCGTCACCATCATGAACCCCAACGTGCTGATGAAGGCCGGAGTGCCGGTGTACAGACTGGACCAACACGCGGGTGAATTCGTGATCACATTCCCGCGCGCCTACCACGCGGGTTTTAATCAGGGATACAACTTCGCCGAGGCCGTCAACTTCACGCCTGCTGATTGGTTGAAAATGGGTCGCGAGTGCATATCGCACTACTCGACGCTGCGGCGCTACTGCGTGTTCTCTCACGACGAGCTACTCTGTAAGATGGCGCTCGAAGCGGACTCTCTGAGCCTGACCGTGGCGTTGGCTGCCTATAGGGACATGCGCACCATGCTACACGACGAGAGGAAGCTCAGGAAGGCGCTCCTTGACTGGGGCGTGACGGAAGCGGAGCGCGAAGCGTTCGAGCTACTTCCGGACGACGAGCGCCAGTGCCAGTTCTGCAAGACCACGTGCTTCCTGTCGTGCGTCACGTGCGCGTGCACGCCGCACGTGACGTGCCTGCGACACTACGCGCAGCTGTGCGCCTGCGCGCCGCACCTGCACAAGCTCAGATATCGTTACACTCTTGACGAGCTCCCCGCAATGCTGGAGAAGCTGAAGCGGAAGTCGGAGGTGTTCCGCGAGTGGGCGGAGGCCGTGCAGAACGCGCTCGACCCCGACACGGCCAAGAGCTGCGACCTGGACGGGCTGCGGCACCATCTCAAGAAGGCCATCGAGCTCAAGATGCAAAAGACTGAAATAGTCCGGGCGCTAGAAACAGCCATCGAGGACGCGGAGAAGTGCGCGTCCGTGATCCAGCAACTGGACCTGAACAAGATGCGCACGCGCACGCGGCACCACGACCCCAAGTACCGGCTCACCATACACGAGCTCACGCTGTTCGCGGCCGAGATCGATGGGCTCCGTTCAGCAGTGAAAGAAGTACTCCGTCAGACATCAGAATTCGAGAATAGAGCCAGTGATCTATTAAACAAGGACTTGGAGAAAGTGGACGCGGCCTACGTGAGGGAACTTGAAGAgACGGTAGACCTGGGGTCGCGTCTCTGCATCGTGCTCCCACAGCTGGCGCCGCTGCAGGCTCGCCTCGCGCAGGCCAAGtttctggaagagatcgccGGCCACAGGAGGACTGCTCCTCCCTCACGCCGGAGGTCATCGACAAGCTGTCGGCGGCCGCCGCCGACCTGTTCAAGTGGAAGACTGGGAGGCGCGCGCGCCGTGCTCGTGGACCCGAGCAAGCCGAGCGGCGCGGACACGCAGTACAGCACGCTCGGCGAGCTCAGCGCGCTGCTGGCCGCGGGCGACGACGTCGAGGCCGCGCTGCCCTCCTACCACGCGCTGCAGACGGCCGTCACGCACGCCAAGGACTGGCTCGACAAGGCCGCGCTGCCCTCCTACCACGCGCTGCAGACCGCCGTCACGCACGCCAAGGACTGGCTCGACAAGGTAACTATACGTCGAGGCCGCGCTGCCTCCTACCACGCGCTGCAGACCGCCGTCACGCACGCCAAGGACTGGCTCGACAAGGTGGAGGAGATGCAGTCGAAGGACCTGTACCCGTACATGCACAGCGTGGAGGCGCTGGCGCGGCGCGGGCAGCAGATCCCGCTGGCGCTGGCCGAGAAGGCGCAGCTGGCCGGCGCGCTGCTCTCCGCGCGCGAGTGGAAGCGCGGCGCCGCCGACATGTTCCTCAAGAAGgcGCGCGCCGCGGTGATCGTCTCGGTCCTCAGTAGTCTCCGGCGCGTCGCTGTAGCTGCGCGTGCGATGCTACATACATCGCACGCGCATCTACGCCGCTATTACGAACTACTTATTAGTTACTTCCGCAGCTATTACGAACGTAGTGTCCATGAAACTGGCCGTACTCGCTACTCGAAGCGCTGTCGCCCCGCACAGAGTCCTCGGAAGGCGggtcgcggcggcgcgcgcgcccgcggCCGGCGACCCTCCGCCCTCCTCCCTGAGGCGGGCCTGTTCCTCCGGAACTTCAACGAGGACGCGACGCCCACGGAGATCGTGGCCGCGTTCAAACAAGCCGAACATAGGGAATTGCAGGCTGTCAAGGAGCTACGAGCCCGCAACATGCGCAAGGAGGTCCGGggcccggcggcggcgggcgtcACGTTCTGCGTGTGCCAGAAGCGGCAGTACGGGGTCATGACGCAGTGCGAGCTCTGCAAGGACTGGTTCCACGCTACGTGCATGCAAGCCGCGAAGCAAGAGAGAGAGGAGTCTCCCGAGCGAGAGAACAATCCGTTCGCGACGACGGAGCCGAAGTTCCTCTGCCCCGACTGCATGCGGACGAAGCGGCCGCGGCTCGACCGCATACTGGCGCTCTTGGTGTGGCTGCAGAAGCTGCCCGTGCGGCTGGCGGAGGGCGAAGCCCTGCAGTGCGTGACGGAGCGCGCCATGGCGTGGCAGGACCTTGCGCGGGCCGCGCTCGCCGACCTGCCGCCGCACGACCGGCATCAGaCGAATAGAGAAAAGGCGGATAAATTAAACGCAGAACTGAAAAAAGCTACCGGAAGGGCGCACGATACTCATATGTCACAAAACCCAAGATCGTCAGCGAGCGTGGAGCACGCGTACAGCGCGTGGCCGCGGTCGCCGCACGCGCGCCTGCCGCCCGGCTTCCTGGCGCGCCTCGAGGACCTCATGCTGGAGGGAGACCTGCTGGAGGTCTGTCCGATTAGAAGAGCAGAGCCACATCTGGAGCGTGGTGGTGAGGCGCGCGCGGCGGAgggccggcgcggcgcgcgcgtgcTGGACGCCGGCCGCAGGAAGCGCGGGcagcgcgcgccgcgcccgcagCACGCCGTCAAGCGCACGCGCAAGCTGcacgcgcccgccgccgccaaGCCGGCGCTCAAGCGCGGCCCGCCCACCACCACCAACTATCTCAACAGGAAACAGGTGCGTAACGAGGAGGATGTCGTCGGGCTCGAGTTTGATGATGCGGAAGCACTACATGGCGCGGCAGGAGCGGCGGAAACGCGGCTCACCCGCGCCCAGGGGAAACACCGCGGGCCGCACGGATGGtcgcgcggcggcgcgcagGCGCGGCGACCGCGCGCGCCTGAGTCCAGCTCGTCGAGCATGTCCTCCAACGAAGACGACGAGGACTACGAGGACTGCGCCGCCGACAAGTGTCTGCGACCCACTGGCAGGGTAGATTGGGTGCAGTGCGACGGCGGCTGCGACCAGTGGTTCATTATGCACTGCGTCGGCCTCGCCAAGCACACCCCTGCGCGAAGACGACGACTACGTCTGCGGCGCATGCACAAGCAGTAA
Protein Sequence
MGKCDEANVEVSMGDSASPMKPDNFTFTPPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFAVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYALHKIVKEAGGFEVCSAERKWSKIARRMGHPQGKGIGSILKSHYERILYPYDVFKSNGAGHDNKDTKIEVKSEQTPEKPTNPSTRARSASKCPGPAATPPPARRYKGGEPEPAAEGSHTEGALPGNNDKGLKTPVKEEPNLETRRSPRENKWMSAGGSCGARSRVTRSTRLREHRMSNMTVSVTPAPVAPAPAPHPDDPCGRVPAEAALPGATDPLAKYMCRVCGRGDVEEQMLLCDGCDDSYHTFCLLPPLADVPKGDWRCPVCLAEEVSKPTEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEKEFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKSSAHLYPGEQQYADSSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRLDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECISHYSTLRRYCVFSHDELLCKMALEADSLSLTVALAAYRDMRTMLHDERKLRKALLDWGVTEAEREAFELLPDDERQCQFCKTTCFLSCVTCACTPHVTCLRHYAQLCACAPHLHKLRYRYTLDELPAMLEKLKRKSEVFREWAEAVQNALDPDTAKSCDLDGLRHHLKKAIELKMQKTEIVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLTIHELTLFAAEIDGLRSAVKEVLRQTSEFENRASDLLNKDLEKVDAAYVRELEETVDLGSRLCIVLPQLAPLQARLAQAKFLEEIAGHRRTAPPSRRRSSTSCRRPPPTCSSGRLGGARAVLVDPSKPSGADTQYSTLGELSALLAAGDDVEAALPSYHALQTAVTHAKDWLDKAALPSYHALQTAVTHAKDWLDKVTIRRGRAASYHALQTAVTHAKDWLDKVEEMQSKDLYPYMHSVEALARRGQQIPLALAEKAQLAGALLSAREWKRGAADMFLKKARAAVIVSVLSSLRRVAVAARAMLHTSHAHLRRYYELLISYFRSYYERSVHETGRTRYSKRCRPAQSPRKAGRGGARARGRRPSALLPEAGLFLRNFNEDATPTEIVAAFKQAEHRELQAVKELRARNMRKEVRGPAAAGVTFCVCQKRQYGVMTQCELCKDWFHATCMQAAKQEREESPERENNPFATTEPKFLCPDCMRTKRPRLDRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDLARAALADLPPHDRHQTNREKADKLNAELKKATGRAHDTHMSQNPRSSASVEHAYSAWPRSPHARLPPGFLARLEDLMLEGDLLEVCPIRRAEPHLERGGEARAAEGRRGARVLDAGRRKRGQRAPRPQHAVKRTRKLHAPAAAKPALKRGPPTTTNYLNRKQVRNEEDVVGLEFDDAEALHGAAGAAETRLTRAQGKHRGPHGWSRGGAQARRPRAPESSSSSMSSNEDDEDYEDCAADKCLRPTGRVDWVQCDGGCDQWFIMHCVGLAKHTPARRRRLRLRRMHKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-