Basic Information

Gene Symbol
G-s-alpha-60A
Assembly
GCA_963693475.1
Location
OY856368.1:13043050-13049184[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.17 8.3e+02 1.2 0.1 3 15 91 103 90 109 0.87
2 13 0.036 1.7e+02 3.4 0.1 3 15 141 153 140 159 0.88
3 13 0.036 1.7e+02 3.4 0.1 3 15 191 203 190 209 0.88
4 13 0.036 1.7e+02 3.4 0.1 3 15 241 253 240 259 0.88
5 13 0.036 1.7e+02 3.4 0.1 3 15 291 303 290 309 0.88
6 13 0.036 1.7e+02 3.4 0.1 3 15 341 353 340 359 0.88
7 13 0.036 1.7e+02 3.4 0.1 3 15 391 403 390 409 0.88
8 13 0.036 1.7e+02 3.4 0.1 3 15 441 453 440 459 0.88
9 13 0.036 1.7e+02 3.4 0.1 3 15 491 503 490 509 0.88
10 13 0.036 1.7e+02 3.4 0.1 3 15 541 553 540 559 0.88
11 13 0.036 1.7e+02 3.4 0.1 3 15 591 603 590 609 0.88
12 13 0.036 1.7e+02 3.4 0.1 3 15 641 653 640 659 0.88
13 13 0.048 2.3e+02 3.0 0.0 3 14 691 702 690 705 0.90

Sequence Information

Coding Sequence
ATGGGTTGCTTCGGGACGCCGGGCGACAAGCCGGACGGCGACGACATCAAGTCGCAGAAGAAACGCAGCGAGATCATCAACAAACAGCTGCAGAAAGACAAGCAGCTATACCGGGCCACTCACCGGCTCCTGTTGCTCGGCGCCGGCGAGTCGGGCAAGTCGACCATCGTGAAGCAGATGCGCATCCTCCACGTGAACGGGTTCTCCGACAAGGAGCGCCGCGAGAAGATCGAGGACATCAAGAAGAACATACGCGACGCCATACTTGTGAGTTGTTTCGCGGTTTCCACCAACAGATGGCGCCACAAGTCGACCATCGTGAAGCAGATGCGCATCCTCCACGTCAACGGGTTCTCCGACAAGGAGCGCCGCGAGAAGATCGAGGACATCAAGAAGAACATACGCGACGCCATACTTGTGAGTTGTTTCGCGATTTCCACCAACAGATGGCGCCACAAGTCGACCATCGTGAAGCAGATGCGCATCCTCCACGTGAACGGGTTCTCCGACAAGGAGCGCCGCGAGAAGATCGAGGACATCAAGAAGAACATACGCGACGCCATACTTGTGAGTTGTTTCGCGATTTCCACCAACAGATGGCGCCACAAGTCGACCATCGTGAAGCAGATGCGCATCCTCCACGTGAACGGGTTCTCCGACAAGGAGCGCCGCGAGAAGATCGAGGACATCAAGAAGAACATACGCGACGCCATACTTGTGAGTTGTTTCGCGATTTCCACCAACAGATGGCGCCACAAGTCGACCATCGTGAAGCAGATGCGCATCCTCCACGTGAACGGGTTCTCCGACAAGGAGCGCCGCGAGAAGATCGAGGACATCAAGAAGAACATACGCGACGCCATACTTGTGAGTTGTTTCGCGATTTCCACCAACAGATGGCGCCACAAGTCGACCATCGTGAAGCAGATGCGCATCCTCCACGTGAACGGGTTCTCCGACAAGGAGCGCCGCGAGAAGATCGAGGACATCAAGAAGAACATACGCGACGCCATACTTGTGAGTTGTTTCGCGATTTCCACCAACAGATGGCGCCACAAGTCGACCATCGTGAAGCAGATGCGCATCCTCCACGTGAACGGGTTCTCCGACAAGGAGCGCCGCGAGAAGATCGAGGACATCAAGAAGAACATACGCGACGCCATACTTGTGAGTTGTTTCGCGATTTCCACCAACAGATGGCGCCACAAGTCGACCATCGTGAAGCAGATGCGCATCCTCCACGTGAACGGGTTCTCCGACAAGGAGCGCCGCGAGAAGATCGAGGACATCAAGAAGAACATACGCGACGCCATACTTGTGAGTTGTTTCGCGATTTCCACCAACAGATGGCGCCACAAGTCGACCATCGTGAAGCAGATGCGCATCCTCCACGTGAACGGGTTCTCCGACAAGGAGCGCCGCGAGAAGATCGAGGACATCAAGAAGAACATACGCGACGCCATACTTGTGAGTTGTTTCGCGATTTCCACCAACAGATGGCGCCACAAGTCGACCATCGTGAAGCAGATGCGCATCCTCCACGTGAACGGGTTCTCCGACAAGGAGCGCCGCGAGAAGATCGAGGACATCAAGAAGAACATACGCGACGCCATACTTGTGAGTTGTTTCGCGATTTCCACCAACAGATGGCGCCACAAGTCGACCATCGTGAAGCAGATGCGCATCCTCCACGTGAACGGGTTCTCCGACAAGGAGCGCCGCGAGAAGATCGAGGACATCAAGAAGAACATACGCGACGCCATACTTGTGAGTTGTTTCGCGATTTCCACCAACAGATGGCGCCACAAGTCGACCATCGTGAAGCAGATGCGCATCCTCCACGTGAACGGGTTCTCCGACAAGGAGCGCCGCGAGAAGATCGAGGACATCAAGAAGAACATACGCGACGCCATACTTGTGAGTTGTTTCGCGATTTCCACCAACAGATGGCGCCACAAGTCGACCATCGTGAAGCAGATGCGCATCCTCCACGTGAACGGGTTCTCCGACAAGGAGCGCCGCGAGAAGATCGAGGACATCAAGAAGAACATACGCGACGCCATACTTGTGAGTTGTTTCGCGATTTCCACCAACAGATGGCGCCACAAAGCGATCATCGTGAAACAGAAGCGGACACGGGGCGGCGCGTAA
Protein Sequence
MGCFGTPGDKPDGDDIKSQKKRSEIINKQLQKDKQLYRATHRLLLLGAGESGKSTIVKQMRILHVNGFSDKERREKIEDIKKNIRDAILVSCFAVSTNRWRHKSTIVKQMRILHVNGFSDKERREKIEDIKKNIRDAILVSCFAISTNRWRHKSTIVKQMRILHVNGFSDKERREKIEDIKKNIRDAILVSCFAISTNRWRHKSTIVKQMRILHVNGFSDKERREKIEDIKKNIRDAILVSCFAISTNRWRHKSTIVKQMRILHVNGFSDKERREKIEDIKKNIRDAILVSCFAISTNRWRHKSTIVKQMRILHVNGFSDKERREKIEDIKKNIRDAILVSCFAISTNRWRHKSTIVKQMRILHVNGFSDKERREKIEDIKKNIRDAILVSCFAISTNRWRHKSTIVKQMRILHVNGFSDKERREKIEDIKKNIRDAILVSCFAISTNRWRHKSTIVKQMRILHVNGFSDKERREKIEDIKKNIRDAILVSCFAISTNRWRHKSTIVKQMRILHVNGFSDKERREKIEDIKKNIRDAILVSCFAISTNRWRHKSTIVKQMRILHVNGFSDKERREKIEDIKKNIRDAILVSCFAISTNRWRHKSTIVKQMRILHVNGFSDKERREKIEDIKKNIRDAILVSCFAISTNRWRHKSTIVKQMRILHVNGFSDKERREKIEDIKKNIRDAILVSCFAISTNRWRHKAIIVKQKRTRGGA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-