Basic Information

Insect: Ectropis crepuscularia
Gene Symbol: -
Assembly: GCA_963693475.1
Location: OY856362.1:9302572-9313951[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.002 0.28 13.2 0.2 2 23 241 262 240 262 0.91

2 9 0.6 85 5.4 0.1 3 23 285 306 283 306 0.93

3 9 1.6 2.3e+02 4.0 2.6 2 23 329 350 328 350 0.91

4 9 0.0033 0.46 12.5 0.4 1 23 354 376 354 376 0.98

5 9 0.039 5.6 9.1 0.2 1 23 381 404 381 404 0.92

6 9 5 7e+02 2.5 0.3 2 23 411 433 410 433 0.81

7 9 0.00063 0.089 14.8 0.3 5 23 443 462 441 462 0.95

8 9 9e-05 0.013 17.4 0.8 1 23 468 490 468 490 0.94

9 9 3e-06 0.00042 22.1 1.8 1 23 496 518 496 518 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.002	0.28	13.2	0.2	2	23	241	262	240	262	0.91
2	9	0.6	85	5.4	0.1	3	23	285	306	283	306	0.93
3	9	1.6	2.3e+02	4.0	2.6	2	23	329	350	328	350	0.91
4	9	0.0033	0.46	12.5	0.4	1	23	354	376	354	376	0.98
5	9	0.039	5.6	9.1	0.2	1	23	381	404	381	404	0.92
6	9	5	7e+02	2.5	0.3	2	23	411	433	410	433	0.81
7	9	0.00063	0.089	14.8	0.3	5	23	443	462	441	462	0.95
8	9	9e-05	0.013	17.4	0.8	1	23	468	490	468	490	0.94
9	9	3e-06	0.00042	22.1	1.8	1	23	496	518	496	518	0.99

Sequence Information

Coding Sequence: ATGagtgcagtaaagaaaaaggGTCCCATAGTCGACCCTGGTCTCTGCAGATGTTGTGGTTCAATGAAGAAATGTCGAGTGCTAAATTTCGAATACGAATGCTTAGGGCAGAAGGAAGTCTACTCTGACATGATAATGGATTGTTTTGGGCTCTTGCTATCCCATCTTGACAGTACCATGTCGGAGAGGCTTGTGTGTGCAACATGTGTGACTCGAATCAGAGAGGCACTGAGCTTCCGGAAGCAAGTCTTACAGTGTGAAGAAGCATTCTTGCTGTTTAAAATGGGAGACGATGACTTAGACACTACACAAACCCCAGAGTCAATGGCATCAAGAGACCTCCAGACTACACTCGAAGTGGAAATTGTGAAGATGGAACCTGAAGATGACGAGGACAAAGATTTGAGTGATGGAGACGCTGGGGCAGATTCTCTGCCTCATTTGGATGAAGATGTCAAACTAAAACAGGGGAACGAAGACTCCAACGACGACCTGCCTCTGCAAACGCTCGCCACCAAACCCTTCAAGAGGGACACAATAAAACAGAACCAGGAATGGTGGATGAAACAACACAACACTGAGGAGAAACCTAaACTCCCGATATCCAAAGTCCAAGAACTGATCCGCGAAAAGGACCTAACATACATGATAGATACGAACATAATATCCATTGTGGAATTCTCATTCGTCTGTCCTTTCAAATGTCGCCACAATAATCTACATTGCTACTATTGCGGAGTGACTTTCACAGATCCCGCCCTACTGCGGGGTCATAGCGTGGTTCATAGTCCAGCCAAATTCAAAGTCACCGATCACAAAAATATGGTGAAAGTCGATTTGACTCGAATTGATTGCAGACTTTGCAGTGAAAAAATCGACGATTTAGAAGAGTTTAAAAGACATATTGTGTCGGTGCATGGGAAGAAGTATTACTTTGAAACGAAGGATTGTGTTCTGCCATTTCGTTTGAAAAAAGATGAGATGCGGTGTGCGTTGTGTTGTGCTCAATTTCCGTATTTTCACGCTTTGAATAAGCATATGAATGAGCATTTTAGTAATTACGTGTGCGAGACTTGTGGACTGgGTTTCGTGGACCGGAACAGGTTCCTGATGCACCAGACGAGGCATGAGCAGGGTACCTACCCCTGCGAGACATGTGGGAAGCTATTCAAGGCGGAATACAACAGGGACTTGCATATAGACCGAGTTCATAAGAAGCGCGGTCGTGTTTACTGTCCGAAGTGCGACGTCCGACTGATGTCGCACCCGCAGAAACTGAAGCACCTAGCGGCCGTGCACGGCGAGAGGCCAGTCAGTCTACCCTGCACTTGTGGAAAGGTATTTGAAACACGAAGAATGCTGACCATTCATTGGAGGAAAGAACACTTGAAGGATTTTAGATACGAGTGCCAAGTCTGCGGCCAGAAGTTCTTCACTCGCTTCGCTCTGAACAACCACATGCCGACCCACACCGGCGAGCGGAACTTCAAGTGTAAAGTGTGCGACAAGACTTATCCGCGACTCAAGACACTCAAGGAGCACACGCGGATACACACCAACGACCGCAGATACAGGTAA
Protein Sequence: MSAVKKKGPIVDPGLCRCCGSMKKCRVLNFEYECLGQKEVYSDMIMDCFGLLLSHLDSTMSERLVCATCVTRIREALSFRKQVLQCEEAFLLFKMGDDDLDTTQTPESMASRDLQTTLEVEIVKMEPEDDEDKDLSDGDAGADSLPHLDEDVKLKQGNEDSNDDLPLQTLATKPFKRDTIKQNQEWWMKQHNTEEKPKLPISKVQELIREKDLTYMIDTNIISIVEFSFVCPFKCRHNNLHCYYCGVTFTDPALLRGHSVVHSPAKFKVTDHKNMVKVDLTRIDCRLCSEKIDDLEEFKRHIVSVHGKKYYFETKDCVLPFRLKKDEMRCALCCAQFPYFHALNKHMNEHFSNYVCETCGLGFVDRNRFLMHQTRHEQGTYPCETCGKLFKAEYNRDLHIDRVHKKRGRVYCPKCDVRLMSHPQKLKHLAAVHGERPVSLPCTCGKVFETRRMLTIHWRKEHLKDFRYECQVCGQKFFTRFALNNHMPTHTGERNFKCKVCDKTYPRLKTLKEHTRIHTNDRRYR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00206425;
90% Identity: iTF_00635745;
80% Identity: -