Basic Information

Insect: Ectropis crepuscularia
Gene Symbol: -
Assembly: GCA_963693475.1
Location: OY856343.1:30110064-30147759[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.049 7 8.8 4.6 1 23 389 412 389 412 0.94

2 7 0.00028 0.04 15.9 2.2 1 23 681 703 681 703 0.97

3 7 0.00013 0.018 16.9 3.3 1 23 708 730 708 730 0.97

4 7 8.1e-06 0.0012 20.7 0.6 1 23 736 759 736 759 0.94

5 7 1.9e-07 2.7e-05 25.8 0.9 1 23 765 787 765 787 0.99

6 7 0.0038 0.54 12.3 8.5 1 23 793 815 793 815 0.99

7 7 4.8e-06 0.00069 21.4 1.7 1 23 821 843 821 843 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.049	7	8.8	4.6	1	23	389	412	389	412	0.94
2	7	0.00028	0.04	15.9	2.2	1	23	681	703	681	703	0.97
3	7	0.00013	0.018	16.9	3.3	1	23	708	730	708	730	0.97
4	7	8.1e-06	0.0012	20.7	0.6	1	23	736	759	736	759	0.94
5	7	1.9e-07	2.7e-05	25.8	0.9	1	23	765	787	765	787	0.99
6	7	0.0038	0.54	12.3	8.5	1	23	793	815	793	815	0.99
7	7	4.8e-06	0.00069	21.4	1.7	1	23	821	843	821	843	0.96

Sequence Information

Coding Sequence: ATGAGGACTGTCGAAGCGCATTTATTAGAAGATAAAATGGACGAAGCAGTGACGCATTACATAAATTCACACCACCCCAACGAGtCTGTACATATCGATGCCAATGGCTTACCAATGAGTGTGCAGGACGACGGAGCTGGTCGGGTGACAATAATGCACCAGCAGACTTACACCACGCAGATGTGCCGGCAAGTGTCGGTGACGGAGCAAGGCGAGGGTCCGTGGGCCGAGGAGTTGCTGGAAGGTCCGATCGCAGCCATCGTGGCGCATCTGCAGAACTCGCGCCACCCGCCGCCCGCGGCGCATCATCACAAGGTGTCGCAAGTGAGGAGCGACGTAGACACGTCAGTGATACTGGACGGCACGATGCGGTTCAATGGACAAAGTTTGGAACAACAGGCGGACCCCATAGTGGTGCAGCTGCCTCCGATGCAGACCCTGCCTCCGCTGCAGGACATGAAGCGGTGCTCGGACACCGACTGGTTCaccgataaaaataaaaagGTCCAGGGCGATGACTCGATGCTCCAAGACTCGGACAGCCAGATCCTAGAGCTGGCGAGCTCCCCGGCGCAGCACAGACAGCAGAGCCGGAAGAGTCTGCCGCACAAGAAGAGGATCTCCAGGAAGCTGAagaggaacaacgggaactccACACCGCAGCAGGAGCTGGTGGTGATCAACTGCAACACCGCGGGCCCCGGGCCGGAGCAGGAGCAGATCCTCCCGGACAGCTACGTGCCGGGGCCGCATCACATGACGCACGAGGTGCGACCGGTGCTGATCTGCCAGATCTGCGGCGAGTACTACGGCGAAGAGCAGCTGAAGTTCTACCACCACCTGCGGCAGCACTACGAGCCGCACACCATCATCATCGAGAACCCGGTGCAGGACCTGCCCACGGACAAGATATCATCAAACTGCATCGTGGACAATGTCGCGACTCTGCCGGACTCTATCGTGGAGCTATCGCTTGAGAACACCGTGCCCAAAACCCTGTACCAGCCCATAGACAAACATATACTCTACACGTCGAGCGAAAAGACGCTCACATACAATAGCAATAAGATGCAGTACTCGATGGCGAGTAGCGCGTTGGAGAAGGCCCCGGTCGCGCCCGAGCAGGACAAGGCGCTCTACTGCGCGCTCGACAAACTGGATCTGTACTCCTGCGGGAAGTGCAGCAAGACCTTCCGCAAGCAGAGACACTGCGAGGCGCACGCGAGAGACGCGCACCGAGACAAGTGTGAGGACATGGGCGAGTTCAGCGAGCCCGAGGACCTGATGGCCGGCATCCAGGTGTGCGTCGGCGGCGAGTACGAGCCCCCCCCGcacctgctgcccaccctcacCGTGGACAACGGGCACGTGACGCAGGACCACGCCGCCTGGTCGTacgcgcgcggcgcgggcgcgcacggcgcgggcgcgggcgcgtgcGGCGGGTACTGCGGCGTGTGCACGCGGGAGCCCGACACGCCGTACAAGCTGCTTAAAGagGAAGTTTTACAAAGGATATTCGACAGCGAAGTGTCGGACAACGCAAACTTTGCGGACAACATGATATCTGATCATGACGTCGGCGATCAAGATCACAATCATGACCATGGCCACGGTCACGAACAGGGAAGCAACGAACATAGCCATGGACACAACGAACACAGCCACGGACACAATGAACATAGTCAAGAACACAATGAACACAATCATAGACACAATATGCATAGTCATGAACACAGCGACCGACATAATgaccataatatacataatgaaCATTCTATACCCAATGACCATTTACGGCATAGTGAACATAGTCAAAACTCTCAAGACCACAATGACCACGATCCACATAATGAAATGGATCATGATCACAGTGAACATAATAATGAACATGATAACGGACACGAACATAGTGATAGTGGCCATGATCCCAGTCAGGAGCATAACGACCATAGTCAAGATCAGCAAGACCACAGTGAAACTAGTCAAGAAAATTATTCATTACTCAAGCAAGAATATCCCGAGGgaaagGGGAAACGCTTCAGTTGCACGAAGTGTGACCGCGTGTTCGCTCACAGGAACAGCTTGTTATACCACGTGCTATCACACGGGGGCAAGCAACATACGTGCAGGGAGTGCGGGAAGGGATTCTATACGCATGGAGCGTTGAAGATCCACCGTCGCCTGCACAGCAACGTGCGTCCGTTCAAATGCGAGACCTGCGGCCGTGAGTTCCGGCAGTGGAGCGACCTCAAGTACCACAGCATCTCCATACACTCGGATAAGAAACACTTCAAGTGCGAGTACTGCGGCAAGGAGTTCGCGCGCAAGTACTCGCTGAACCTTCACGTGCGCATCCACACCGGGGAGAAGAACTACAAGTGTCACTACTGCACCAAGACGTTCAGCTGCTCCTCCTACCGGCTCGCGCACATGCGGACACACACAGGCGATCGTCCCTTCAAGTGCGAGGAGTGCGGCAAGCCGTTCCGGTCCGCGTTCGACCTGCGCCGGCACTCGCACGTGCACGACCGCGTCAGGAACAGGTTCGACGAACACAAGCCCAAGGACAAGAAAACCAAGATGGCCGACACCAAGGAACAGAAACTAGACAAAATAGGACAAAAGATGGAAACGATCGACCACAAATTCAACTCCCCAACGGAACAAAAGAACTTGGAGCCATCTcccaaaaaaatcaaacaaatcgcTGTAGCTTCAACGACTAGACAGGGGGTGTTAATGAAAAAGCAGCCGAAATCGAAAAAGACCAACAAAAAAGGTGCCCCAAATGTGACAATACAAAGCAGACAAGGCCCCTACAAACTGAACGACCAATACACAAACAATGTCGAGGTGTACGACGGCCGGACGGAATATGCTAAACTTAAAAACATTTACACAGAAAGACATCAAACAATGTATAAAGATGAACAAATCCCGCAGCGGGAATTAGCCATCCTCAGACCTATAGGCCATAAATCAGTTAGCTTAGACGAAAAACTACCTTATAGGGCTGAGAATACGGACGGAAAAATGCAAGTTTTCACTCACGTCGAAAAGGGGAAAGAATACAATAGTACTATAGTTACTAACACTCAGGGTTTGACAGATTTGAGACATTTGGAAAGGGACGTGACGAGGGAAGTAAGAGGGGAGGTTGCGGGGGAGGGGATAGAAACGGCTTTCCTGGAAAGGTTAACAGCAATGTATAATATATCTGCCGTATAG
Protein Sequence: MRTVEAHLLEDKMDEAVTHYINSHHPNESVHIDANGLPMSVQDDGAGRVTIMHQQTYTTQMCRQVSVTEQGEGPWAEELLEGPIAAIVAHLQNSRHPPPAAHHHKVSQVRSDVDTSVILDGTMRFNGQSLEQQADPIVVQLPPMQTLPPLQDMKRCSDTDWFTDKNKKVQGDDSMLQDSDSQILELASSPAQHRQQSRKSLPHKKRISRKLKRNNGNSTPQQELVVINCNTAGPGPEQEQILPDSYVPGPHHMTHEVRPVLICQICGEYYGEEQLKFYHHLRQHYEPHTIIIENPVQDLPTDKISSNCIVDNVATLPDSIVELSLENTVPKTLYQPIDKHILYTSSEKTLTYNSNKMQYSMASSALEKAPVAPEQDKALYCALDKLDLYSCGKCSKTFRKQRHCEAHARDAHRDKCEDMGEFSEPEDLMAGIQVCVGGEYEPPPHLLPTLTVDNGHVTQDHAAWSYARGAGAHGAGAGACGGYCGVCTREPDTPYKLLKEEVLQRIFDSEVSDNANFADNMISDHDVGDQDHNHDHGHGHEQGSNEHSHGHNEHSHGHNEHSQEHNEHNHRHNMHSHEHSDRHNDHNIHNEHSIPNDHLRHSEHSQNSQDHNDHDPHNEMDHDHSEHNNEHDNGHEHSDSGHDPSQEHNDHSQDQQDHSETSQENYSLLKQEYPEGKGKRFSCTKCDRVFAHRNSLLYHVLSHGGKQHTCRECGKGFYTHGALKIHRRLHSNVRPFKCETCGREFRQWSDLKYHSISIHSDKKHFKCEYCGKEFARKYSLNLHVRIHTGEKNYKCHYCTKTFSCSSYRLAHMRTHTGDRPFKCEECGKPFRSAFDLRRHSHVHDRVRNRFDEHKPKDKKTKMADTKEQKLDKIGQKMETIDHKFNSPTEQKNLEPSPKKIKQIAVASTTRQGVLMKKQPKSKKTNKKGAPNVTIQSRQGPYKLNDQYTNNVEVYDGRTEYAKLKNIYTERHQTMYKDEQIPQRELAILRPIGHKSVSLDEKLPYRAENTDGKMQVFTHVEKGKEYNSTIVTNTQGLTDLRHLERDVTREVRGEVAGEGIETAFLERLTAMYNISAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00635748;
90% Identity: iTF_00635748;
80% Identity: -