Basic Information

Insect: Ectropis crepuscularia
Gene Symbol: Hivep1
Assembly: GCA_963693475.1
Location: OY856364.1:9611101-9636529[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.064 9.1 8.4 2.3 1 23 212 235 212 235 0.97

2 10 0.04 5.7 9.1 0.3 1 23 241 263 241 263 0.98

3 10 0.056 7.9 8.6 0.2 1 23 267 290 267 290 0.96

4 10 1.3e-05 0.0018 20.1 0.0 2 23 327 349 326 349 0.97

5 10 0.00085 0.12 14.4 1.8 1 23 356 378 356 378 0.95

6 10 0.039 5.6 9.1 4.3 6 23 389 406 385 406 0.91

7 10 0.0093 1.3 11.1 0.1 1 23 417 440 417 440 0.93

8 10 1.7e-05 0.0024 19.7 1.8 1 23 446 469 446 469 0.93

9 10 4e-05 0.0057 18.5 0.2 3 23 480 500 479 500 0.98

10 10 0.037 5.2 9.2 0.9 2 23 507 529 506 529 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.064	9.1	8.4	2.3	1	23	212	235	212	235	0.97
2	10	0.04	5.7	9.1	0.3	1	23	241	263	241	263	0.98
3	10	0.056	7.9	8.6	0.2	1	23	267	290	267	290	0.96
4	10	1.3e-05	0.0018	20.1	0.0	2	23	327	349	326	349	0.97
5	10	0.00085	0.12	14.4	1.8	1	23	356	378	356	378	0.95
6	10	0.039	5.6	9.1	4.3	6	23	389	406	385	406	0.91
7	10	0.0093	1.3	11.1	0.1	1	23	417	440	417	440	0.93
8	10	1.7e-05	0.0024	19.7	1.8	1	23	446	469	446	469	0.93
9	10	4e-05	0.0057	18.5	0.2	3	23	480	500	479	500	0.98
10	10	0.037	5.2	9.2	0.9	2	23	507	529	506	529	0.92

Sequence Information

Coding Sequence: atgcCTTTGTACAACTTCAATGAAACCTTAGCTATTTCTGATTCACTAGAAAATGGTTGTTTTTGTTGTTCAACGCGAAACGATGTTATGATCAATCTTGCGAGTTGCAAGCACAATGGCTTTTTACGTGAATATATTTCGATCCAGAATCAGAGGTTATTGGTTTGCGGCGTCTGCCATAATATGCTGATGAAAATAACGAGTTTCATTCTACAAGTACAAGAGAGCAACGAATGTTTAAATCAAAAGGTGATCTTTAATCCGAAATCAAAACTATTTAACCTGCAACAATCAGATATTACTATAACGTCCACTTTAGATACGAGTTATGACATAAAAAACGAATCGTCCAATAAGGAACCAGAAGAATTcgatttgaaaaacaaaacaaccaaTAAGAGCCCTTCATTTGAAATGACAACAGACGTGAAAATAGAACACGACAGTTCCGATTTTGAAAATGACATTCCTCTCGctcaaattaagaaaaaaaagaaaaaggcgcGCAAAGTGCAAACGGTGAAGTTGGACAAAAAATACGATGGAAAGATTAGAGTTGTGATATTGACTCAAGATGAGTTGACGTTGGAAAGAGAAAGAGAATCGAATAAAGATTCTTATTTGAAACTACcgtttaaatgcgaaagttgcatcAAAGGGTTTGACCATGAGAATACGCTGAAGACTCATTTAGAAAAGCAACATATGaaGGAAGGAGTGTATAGATGTGACATATGTAACTCCGTGCTTGGTTCTGAAGCGTCGTACAAGGAACACTCTAGAAGACATCTCAGAAGGTTCGAGTGCGTGGCGTGTGGCAAGCGCACCACAGACGTATACTCCGTCTCGCAACACTACAACGTGCAGCATGGCAACACTGGCGGTATCAGCATGCAGTTCTCTTGCACCTGCTGCGATTACACCACCGATTCCCACCGCGCGTACCGCTACCACCGAGAGAAGCACAAGAGGAAGCAGCAATGTGCCGTCTGTGGCAGCACCTTCGTGAGTGCCAGCGGCTTGCGAGCGCACATGAACACAGTCCACAAACATTCGTCTCGGGTGTACAAATGCCCGACATGCGACAAGTCGTACCGTTGTAAGTCTGGATTATTCGCGCACGCGTCGGCGCACTCCCACGCTAGGACCGCGTACTGCGCCCCCTGTCGGACGCACTTCGCGACCCGCAACAACTTGATGCACCATCTGAAGACGCATTCCAACCACGTCACCGATGATAGCAAGAAGTTCGTTTGTCAAGAGTGTGACGCCAGGTTTCTGAGCAAGGTCGCCCTGCAAACGCACATCGACTGGGACCATCTGAAGACTGTCAAGCATGAGTGTGAAAAATGCTCTAAGGTATTCAAGACTGCCGTGACATTGAAAAAACACATCAGTTTCGTTCATGAAAAAAAGCGACCGCCCAGAGACAAGATTTGTGATTACTGTGGACGAGCCTTCACTACGACATCTATCCTGGTGTCTCACATCCGCACGCACACAGGCGCGCGGCCGCTGCGCTGTTCCCACTGCGCCGCTACGTTCGCGCACGCCGCCGCTCTATACACGCACAACAAACTTATAcacaacaaataa
Protein Sequence: MPLYNFNETLAISDSLENGCFCCSTRNDVMINLASCKHNGFLREYISIQNQRLLVCGVCHNMLMKITSFILQVQESNECLNQKVIFNPKSKLFNLQQSDITITSTLDTSYDIKNESSNKEPEEFDLKNKTTNKSPSFEMTTDVKIEHDSSDFENDIPLAQIKKKKKKARKVQTVKLDKKYDGKIRVVILTQDELTLERERESNKDSYLKLPFKCESCIKGFDHENTLKTHLEKQHMKEGVYRCDICNSVLGSEASYKEHSRRHLRRFECVACGKRTTDVYSVSQHYNVQHGNTGGISMQFSCTCCDYTTDSHRAYRYHREKHKRKQQCAVCGSTFVSASGLRAHMNTVHKHSSRVYKCPTCDKSYRCKSGLFAHASAHSHARTAYCAPCRTHFATRNNLMHHLKTHSNHVTDDSKKFVCQECDARFLSKVALQTHIDWDHLKTVKHECEKCSKVFKTAVTLKKHISFVHEKKRPPRDKICDYCGRAFTTTSILVSHIRTHTGARPLRCSHCAATFAHAAALYTHNKLIHNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00635742;
90% Identity: iTF_00635742;
80% Identity: -