Basic Information

Insect: Ectropis crepuscularia
Gene Symbol: -
Assembly: GCA_963693475.1
Location: OY856349.1:5621579-5636600[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 7.8 1.1e+03 1.9 0.1 2 23 109 130 108 130 0.94

2 19 0.00024 0.034 16.1 0.5 2 23 134 156 133 156 0.91

3 19 0.0098 1.4 11.0 2.3 2 23 380 402 379 402 0.96

4 19 3.8 5.4e+02 2.9 0.1 3 19 412 428 411 428 0.97

5 19 0.046 6.6 8.9 0.4 2 23 441 462 440 462 0.94

6 19 0.22 31 6.8 3.0 1 23 510 533 510 535 0.79

7 19 6.9 9.7e+02 2.1 2.9 2 23 542 563 541 564 0.93

8 19 3.5 5e+02 3.0 3.7 1 23 571 596 571 596 0.90

9 19 0.27 38 6.5 0.7 2 23 607 629 606 629 0.90

10 19 0.42 60 5.9 1.0 1 23 634 657 634 657 0.96

11 19 0.00023 0.033 16.1 2.3 1 23 663 685 663 685 0.97

12 19 3.2e-06 0.00045 22.0 2.4 1 23 692 714 692 714 0.98

13 19 9.5e-05 0.013 17.4 2.3 1 23 719 741 719 741 0.96

14 19 0.0042 0.6 12.2 1.1 1 23 747 769 747 769 0.96

15 19 2.2e-06 0.00031 22.5 1.2 1 23 775 797 775 797 0.97

16 19 3.6e-05 0.0051 18.7 3.0 2 23 804 825 804 825 0.98

17 19 0.00042 0.059 15.3 1.0 2 23 835 857 834 857 0.97

18 19 0.00048 0.068 15.1 2.4 1 23 862 884 862 884 0.99

19 19 0.0023 0.32 13.0 2.5 1 23 890 913 890 913 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	7.8	1.1e+03	1.9	0.1	2	23	109	130	108	130	0.94
2	19	0.00024	0.034	16.1	0.5	2	23	134	156	133	156	0.91
3	19	0.0098	1.4	11.0	2.3	2	23	380	402	379	402	0.96
4	19	3.8	5.4e+02	2.9	0.1	3	19	412	428	411	428	0.97
5	19	0.046	6.6	8.9	0.4	2	23	441	462	440	462	0.94
6	19	0.22	31	6.8	3.0	1	23	510	533	510	535	0.79
7	19	6.9	9.7e+02	2.1	2.9	2	23	542	563	541	564	0.93
8	19	3.5	5e+02	3.0	3.7	1	23	571	596	571	596	0.90
9	19	0.27	38	6.5	0.7	2	23	607	629	606	629	0.90
10	19	0.42	60	5.9	1.0	1	23	634	657	634	657	0.96
11	19	0.00023	0.033	16.1	2.3	1	23	663	685	663	685	0.97
12	19	3.2e-06	0.00045	22.0	2.4	1	23	692	714	692	714	0.98
13	19	9.5e-05	0.013	17.4	2.3	1	23	719	741	719	741	0.96
14	19	0.0042	0.6	12.2	1.1	1	23	747	769	747	769	0.96
15	19	2.2e-06	0.00031	22.5	1.2	1	23	775	797	775	797	0.97
16	19	3.6e-05	0.0051	18.7	3.0	2	23	804	825	804	825	0.98
17	19	0.00042	0.059	15.3	1.0	2	23	835	857	834	857	0.97
18	19	0.00048	0.068	15.1	2.4	1	23	862	884	862	884	0.99
19	19	0.0023	0.32	13.0	2.5	1	23	890	913	890	913	0.97

Sequence Information

Coding Sequence: ATGTCTTCTGACGATTCCGATGACGAGCCTTTGTCGGTTATAGCAGCTTTGAAAAACCGAGATGAAAGAGGTCTCGAAATTGTCCCAATCTTCAAAAAAGGGGACAATTCGGCTAGTCAAGATGTAAAAAAAGACTGTGATTTATCAATATCCATTCAACAGATTCAAAATGAATTATCACCGGTCGTCGAGAGGCCGACAGATGTGTGGTTGTATTTGACAGATTTTAATGTAACTGGGCCATACACTTGCCTCCTGTGTCCGGAATGGTTCATAAACAGGAATAGGATAGTGGTTCACTATGTTATCGATCATAAGAAGGATTATTGTGGAATATGCAGATATCTAGTACCTAACCGAGAAGCTTGGTTGGAACACCAGAAGTTCCACACTCCATGGAAATGTTCTCAGTGTAATGAGAAGTTTCCTAATCAGTCGGAACTACGAATTCATTTCAGCAACGCACATAAACTTGTTCACTGTCGCTTCTGCCATTTACGTGTGTCTGATGACGAACAATACCACAAGCATTTATTCCAAAAACATTGCGTCACAAACACGTCACACATACAGGAAGAGTGTCTATGGGATTTTGAATGCAAGGGCGATCAAAAGTTTCTGTGTCTACTCTGCTCGAAATCAATCAATGTTGGACGACAATTCACAGACCACTTTATGTCGTACCATCATTTTACCCTCAAATGCTTCATGTTCTTTATAGCTGGAATTGACTTACCATTTAAAGTTAAAGGTGTGGATATATCTCCAGAATTTGTTGAAACACAACTTAGAGCATACAGTACATTTGGTTatgttgattttataaaaagtctTAGATTTAAAGAAGAGTCTGTGACAGTTGTAGAAGAAGCCCCAATTACTGTTGATTGTGAACCAGAGTTGAAAGAACTCAATGAAAACTATGAAGATAGTGAAGAGTTGAAGCTTAGCGAAGAAATAAGAGGTTACAAAGGaataaccgattttgatgtcaCACTCATAGAAGTTATAACATTGCAGACTTCTTATTTTGACTACATAAATGCCACTATAAAAGATATTAATAGCCAAATAATGCCCATGTTTTCACATATTACGTATCCCAATGCCAATGCTATTGTTGAAACAAAACCGATCAAATGTTGTGTATGTTCGGAAGTTTTCATGAAGAAGAATACATTTGAGACTCATATGATGAGAGCACACTGTATAAGATCTTTACCAATGTTTTGGTGTAGGGTATGTGCTGCAGTGTTTGACACATTCTCAGAACTGGAATCTCATTGTACACAAGAGATGGGCGAGTTTGAAGATTTATGGATTTGTCAGTTTTGTGACAAAGAGTTTGACGGTCGAGAGGACACAAGGAAACATTTGACAGAACACTGGAATGAAATAGAGTATGACAATTGCTTCAGCCCACACTTGGGGTTCAAATGCAAGTTCTGCCCGACTCTATTTTGGAATGAGACTGATAGAGAGTCTCATCATGTTAAAGTGCATGTACACAATCATAAAAGTGATTTTTATCATTGTACCCTTTGTGGTCAAGATTTTGGAGACAagGTCTTTTTTGTCCAACATCATTTGGAGAAACACAGTAGGGAGACTTTGTACCTCATGAAATGCTGTGTATGTTCTATAGTACTTGAAAACAGTCAGGAAATGAGAAGCCATTTCAACGAGCATCATCCAAATGCTGTGAAAATATTCTGTTGCTTGGAAGACTGTAAGTTTAGACCTTTCAGTCAGAGGAAATCTTTTCTAATACATTTGAAGTCGTTCCACGATCCAATATCTCGGAACCCTCGCTCGGTGACTTGCGAGACATGTGGTATGGAGTTCAACAGTCCCAAGTCATGTACCTTGCATGCTTTAAAGGCTCACGGGCCAGGCAGGTTCAAGTGTACATTGTGTTCTGAAGTGCTCCACACTGCTGATGAAAGAAAAATCCACTACCTGATTCGCCACCCGGGTCGCTCGCAGTACGAGTGCAACGTGTGCCAGAAGTCCTTCCAGTATAAATCGTCGCTGTATATGCACAAACAGGAGCATGCACCTAATAAGCAAGACCACACCTGTCCGTACTGCGGGAAGACTTTCATGAAAAAAGACTCGTTCAAAGAGCACATAATGATCCACGAGGCGCCGCGGCACGCGTGCTCCTACTGCCCGATGCGGTTCGTCCAGCGCTCCAACATGCTGCGACACGAGCGGAGACACACCGGCGAGAGACCATACGCGTGCCAGTACTGCCCGCGAACGTTCGCTGACAAGGGGGCCTGTAATTCACATTCAAGGGTACACGTGAAGACTACGTCGTTTGCATGCGTCTACTGCGGTCAGACGTTTGTGCAGAAATCAAAGCTCACCTATCACATCCggaaacatactggagaaaATCTGGAGACCTGTTCAATTTGCTCGAAGATATTCACGAGCGCGTGCTCGCTGCGGGAGCACATGAAGACGCACCAACGGAGCAAAATGAAGAAGACGATCAAATGTCCGCTCTGCAAGAACATGTACACGACGGAACGGGACATGCTACGTCACATGCGCACGACACACACGGGCACCGACTTCAAGTGTCCGCTGTGCAGCCGGTGTCTGTGTTCCCCGGCATCGCTGCGGGAACACGTGCTCACACACAGCGGCGTCGACAGCTATCGGTGCACATTCTGCCCGAAGACCTACCAATCGAAGAAGTCGATACTCAGGCACATAGAGAAGCGACACAACACGAAGCCCCCGATCAACCCCAACCTATACACCCGCCTCGATCCCAAGGAGTGCGGGTTGGGCCTagacgatgacgtcatcgacaAAATCTTCGGTAAAGCAAAGAAGGCGAGGAACACGGATCTTCTCTTTGGCGACTTTGTGTCATTCAACAAACGTCCGCGGCTTAGGAACGAGAGTGACGATAATTCGGAATCCGGACAAGTGCTTCGAACGGAAATCGTTGAGATCAAACTGGAGCCTGGGGATGATGAGGAGGAAGATGAAGAGATACCTCCGATTAACTTTGTGAATGTGAAGATTGAAAAAATGGATGAAGATCCGAGGTCTGATGGGGAATATTGA
Protein Sequence: MSSDDSDDEPLSVIAALKNRDERGLEIVPIFKKGDNSASQDVKKDCDLSISIQQIQNELSPVVERPTDVWLYLTDFNVTGPYTCLLCPEWFINRNRIVVHYVIDHKKDYCGICRYLVPNREAWLEHQKFHTPWKCSQCNEKFPNQSELRIHFSNAHKLVHCRFCHLRVSDDEQYHKHLFQKHCVTNTSHIQEECLWDFECKGDQKFLCLLCSKSINVGRQFTDHFMSYHHFTLKCFMFFIAGIDLPFKVKGVDISPEFVETQLRAYSTFGYVDFIKSLRFKEESVTVVEEAPITVDCEPELKELNENYEDSEELKLSEEIRGYKGITDFDVTLIEVITLQTSYFDYINATIKDINSQIMPMFSHITYPNANAIVETKPIKCCVCSEVFMKKNTFETHMMRAHCIRSLPMFWCRVCAAVFDTFSELESHCTQEMGEFEDLWICQFCDKEFDGREDTRKHLTEHWNEIEYDNCFSPHLGFKCKFCPTLFWNETDRESHHVKVHVHNHKSDFYHCTLCGQDFGDKVFFVQHHLEKHSRETLYLMKCCVCSIVLENSQEMRSHFNEHHPNAVKIFCCLEDCKFRPFSQRKSFLIHLKSFHDPISRNPRSVTCETCGMEFNSPKSCTLHALKAHGPGRFKCTLCSEVLHTADERKIHYLIRHPGRSQYECNVCQKSFQYKSSLYMHKQEHAPNKQDHTCPYCGKTFMKKDSFKEHIMIHEAPRHACSYCPMRFVQRSNMLRHERRHTGERPYACQYCPRTFADKGACNSHSRVHVKTTSFACVYCGQTFVQKSKLTYHIRKHTGENLETCSICSKIFTSACSLREHMKTHQRSKMKKTIKCPLCKNMYTTERDMLRHMRTTHTGTDFKCPLCSRCLCSPASLREHVLTHSGVDSYRCTFCPKTYQSKKSILRHIEKRHNTKPPINPNLYTRLDPKECGLGLDDDVIDKIFGKAKKARNTDLLFGDFVSFNKRPRLRNESDDNSESGQVLRTEIVEIKLEPGDDEEEDEEIPPINFVNVKIEKMDEDPRSDGEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00635663;
90% Identity: iTF_00635663;
80% Identity: -