Basic Information

Insect: Ectropis crepuscularia
Gene Symbol: -
Assembly: GCA_963693475.1
Location: OY856351.1:19825250-19835024[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0024 0.34 12.9 3.7 3 23 721 742 720 742 0.97

2 7 6.3e-08 8.9e-06 27.4 1.1 3 23 760 780 759 780 0.97

3 7 0.00016 0.023 16.6 1.7 1 23 786 808 786 808 0.99

4 7 1.4e-07 2e-05 26.3 1.6 1 23 845 867 845 867 0.98

5 7 6.8e-06 0.00096 21.0 0.7 3 23 875 896 873 896 0.96

6 7 0.00065 0.092 14.7 1.8 1 23 902 924 902 924 0.97

7 7 0.00011 0.015 17.2 1.2 1 22 930 951 930 951 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0024	0.34	12.9	3.7	3	23	721	742	720	742	0.97
2	7	6.3e-08	8.9e-06	27.4	1.1	3	23	760	780	759	780	0.97
3	7	0.00016	0.023	16.6	1.7	1	23	786	808	786	808	0.99
4	7	1.4e-07	2e-05	26.3	1.6	1	23	845	867	845	867	0.98
5	7	6.8e-06	0.00096	21.0	0.7	3	23	875	896	873	896	0.96
6	7	0.00065	0.092	14.7	1.8	1	23	902	924	902	924	0.97
7	7	0.00011	0.015	17.2	1.2	1	22	930	951	930	951	0.97

Sequence Information

Coding Sequence: atggAAGGTTTTTGTCGTGCTTGCCTCAACAAATTTGAACCTATAGACCTTTATCAATATTGCGAAAGTAATAGAAGGCTTTTCATATACTGCACCGGTTTACAGGTAAAGTGTAATGATAATTTCACATTCCAACTATGCAAAGAATGTTACTTGAACCTGAAGTTTTACTGCAAGTTcaagaaattatgtagaacttcagacaaaaaaatcaaaagctACCTGGCTGTGAGAAATGACAAGGATGGCATTGACTTCAGTACTTATCTTGAAAATGTTGAAGACACCTTGCCTttgagGCTCCCAATAGTGAGCAGGAGTAGTTCACCGGTTCACCAAAagaattatgatgatgatgacaatgAGTCAACATGCACCAGCATACAGAACTTTATGTCAGACATATTGCAAGGGGAAGAGATACCACCAACAGAAGCCAGAATCGTTCGGGAGGTCATACAGGAGGAGGCGGATATTCTGGATGATTCTCTCGACTCACATTGGCTGGAGGATGACGCCTCTGTTGATAATGACTTCGGAGTGGATTTCAATTTTGCTGGATATTCTACACCAAATTCCATAAATAATGATCACTGCTATACACCAAGGAGGCTCACTAACAATGTAGATGAAGGCTACTATTATACTCCAAATGACTCCATTCAAAGGCCTAAAAATGCCTTGAATACAATCGATCATAAAGATATGCCTTTGCTTGGAAGCAATGAAAATACTGTAACAAATCCTGATAATGATGAAAATGTAAATGCTGAACACGAAAttaatatatcaaatgaaaatgACATGCCACTACTTGATGACTGTGATATAGAATTAGATGGTATTGTTGACAATGTAATGAACAATTTAGAAAGTGAATATCACACCGAATCTGCTCTACCAATTACTGTAATTCTCAACAAAGGAGTAGTACCTAAGGTCATTTCTCCATTAACTGATGAACTTGAATTTTATATGAGTAATGTAGACACTGACAAAATAAGTAGatgtgaaaataaaatgtataataatgaAACACATAGTGACACTGatatagaacaaaataaatcaatcttACCACTAAACTTGGATCAGTATTTAGATGTTGTTAAGTTTAATGGAACTCCAGAAAAACATGTTGAAGTTTTGGAATCTCCAGTGAAATTTGAACttgaaaaatacatacacaAAGCTGAAATAAGGAGAAAATTAAGCATAGCAAACAATGAAAGTATTAAAGAGTTAAATGAAAAATGCGCAATTGATATGAATTTAGAATTAGCTTTGAAAAATGATGATAGTCAAGAATTTTCACTGGATCAACTTTTGATTTCTCcacaagCGTGTATGCAGTCAGGAGCTTCTACACCTACGataaacaacattttatttgGAAATTTGACTCCAAGACATCCAGATACAATCCCTGTATCCCTAAGTACTATAGGCAATATAAAAGATGTCCCAAAAACAATAGACAAAGTAGTAAAACCTAGGCGATATTTAAAGGTAAAAGACTTGaataaaatcaaagaatctaAACTGAATACTACAAGAAGGGTAGATAAAGAATCACCTTCAAAGGGTCGCAAAGGTATTAAAATTATGAAACGCAAACCCCGAACTAAACAAGGTATTAAAGATATTCAAAGACTCAAAGAACTATTAAATGAAGATAGTGTATCACATTCAGCAACAGTTGATGATAAATATGATACTGAGTTGGATATAGGAAATCACTGTGACACACCTGACATTAATACGTCAGAAAATAGTCGAAAAGAACCAATGATAGAACTAATTGAAGTTGTACAAGAAAATGACCATAAAACATCAGATATTGAAATGGTGGAAAGTGATcagattaaaattaaatcaatcgACCATCTGAGTAACGATTCCATCAATAAATCACTAAATAATTTTGATGATGATCTGCAAAATATAAGCGTTTCAAAtttgcttatttttgatgatGCCAAAAGTGTTGATATGAATATCAGTTTATCATCAGATTTTCTAGCAGAAGATATTGGACATATAAAAGCTGGAGATAAACGGGAGAGTGATGAAGATGATGGCTTAGAAGAATTAGAAGATTCAATTTTTAAGAAACCATTTTTACCTCCCGACGACAAATACGATTTTGACAAAAACCTTTGTAAAATCTGCGATAAAACTTTTATGAGTACTACCTCACTGAAACACCATTTTAATAAGGTTCATAAACAACAACTACCAAGAAAAAAATCTATCAGAAAATTCATTCCAAAAATTTGTCCTAAGTGTGGTAAAAGTTTTCGGGACACATCCAATTTTAACAGACATATGAGAGCACATGAGgatccGGATTCGTTTAAATGTGAGTACTGTACTCTGGAGTTCCCGTCGCGAGGTAGATTTAACCAGCACATGAGAAGTCACGCCGATGAAGTTATTGTGAAGGATactgataatttaatttttaagaaaaaaaatagtgataatGGCACCAATAAACAGAGCAGCTTGGAGGACAAAATAAAGGAGAAATTTATTTGCAGCGTATGCGGTAAGGAATTCAAAACGAGTAGCAAttacaaagtacacatgaaaAGGCATAACAAAATCTACGCAGTGCATTGTCCTATATGTGGGAAAGGCTTCATTCGGAAATATGATATGGAATCGCACTTGAGGTCAACACATAAACAAGAGAGAAATTTCGCGTGCGAGTATTgtccaaaaaaatataacagtCGCCACTTGCTGGTCGGTCACATGTACAGACACCTGGGTAAAGAAAAATTCAGTTGCAAAGTCTGCGACCGGAATTTTATTTCTAATCAATATTTGCAACAGCATTACAGAACGGAAATGTGCGCAAAAAATAGAAAAGCTCTCGAAGGCATGTTAgaaaatactgaggtaactgtTTCGTATAGGCCCGTAAGTAAACCGCTAGACAAAACGAATGAAGAAactgaaaaaagttctaaaatCGAATCAGAATCTAAGAGGTCCAAGGAAACTGCAAAAACCGAGGTAAAATCGCAGGAGCTTATGGACTGGTCAGAATTATTTACAAAGTCCAAGGAGGCCACAGATAGTGAACCGGAAACAAAGCAAACCATAGAAAGTTTAGAAATTGAATCAAAAGAATCAGTGATACGAAAGAAAGTCATGAAAAACTACAAGAGTTAA
Protein Sequence: MEGFCRACLNKFEPIDLYQYCESNRRLFIYCTGLQVKCNDNFTFQLCKECYLNLKFYCKFKKLCRTSDKKIKSYLAVRNDKDGIDFSTYLENVEDTLPLRLPIVSRSSSPVHQKNYDDDDNESTCTSIQNFMSDILQGEEIPPTEARIVREVIQEEADILDDSLDSHWLEDDASVDNDFGVDFNFAGYSTPNSINNDHCYTPRRLTNNVDEGYYYTPNDSIQRPKNALNTIDHKDMPLLGSNENTVTNPDNDENVNAEHEINISNENDMPLLDDCDIELDGIVDNVMNNLESEYHTESALPITVILNKGVVPKVISPLTDELEFYMSNVDTDKISRCENKMYNNETHSDTDIEQNKSILPLNLDQYLDVVKFNGTPEKHVEVLESPVKFELEKYIHKAEIRRKLSIANNESIKELNEKCAIDMNLELALKNDDSQEFSLDQLLISPQACMQSGASTPTINNILFGNLTPRHPDTIPVSLSTIGNIKDVPKTIDKVVKPRRYLKVKDLNKIKESKLNTTRRVDKESPSKGRKGIKIMKRKPRTKQGIKDIQRLKELLNEDSVSHSATVDDKYDTELDIGNHCDTPDINTSENSRKEPMIELIEVVQENDHKTSDIEMVESDQIKIKSIDHLSNDSINKSLNNFDDDLQNISVSNLLIFDDAKSVDMNISLSSDFLAEDIGHIKAGDKRESDEDDGLEELEDSIFKKPFLPPDDKYDFDKNLCKICDKTFMSTTSLKHHFNKVHKQQLPRKKSIRKFIPKICPKCGKSFRDTSNFNRHMRAHEDPDSFKCEYCTLEFPSRGRFNQHMRSHADEVIVKDTDNLIFKKKNSDNGTNKQSSLEDKIKEKFICSVCGKEFKTSSNYKVHMKRHNKIYAVHCPICGKGFIRKYDMESHLRSTHKQERNFACEYCPKKYNSRHLLVGHMYRHLGKEKFSCKVCDRNFISNQYLQQHYRTEMCAKNRKALEGMLENTEVTVSYRPVSKPLDKTNEETEKSSKIESESKRSKETAKTEVKSQELMDWSELFTKSKEATDSEPETKQTIESLEIESKESVIRKKVMKNYKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00635684;
90% Identity: -
80% Identity: -