Basic Information

Insect: Ectropis crepuscularia
Gene Symbol: -
Assembly: GCA_963693475.1
Location: OY856362.1:9496944-9501527[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.014 2 10.5 1.7 2 23 159 181 158 181 0.92

2 10 0.0023 0.33 13.0 1.9 2 23 206 228 205 228 0.93

3 10 0.039 5.6 9.1 1.6 2 23 252 273 251 273 0.96

4 10 5.4e-06 0.00077 21.3 2.0 1 23 277 299 277 299 0.98

5 10 0.68 97 5.2 1.5 1 13 304 316 304 317 0.91

6 10 1.7e-05 0.0024 19.7 1.8 3 23 337 358 335 358 0.96

7 10 3.7e-07 5.3e-05 24.9 1.4 1 23 365 388 365 388 0.98

8 10 0.0049 0.7 12.0 0.6 1 23 394 416 394 416 0.96

9 10 9.8e-07 0.00014 23.6 3.3 1 23 422 444 422 444 0.99

10 10 6.4e-05 0.0091 17.9 1.4 1 23 450 473 450 473 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.014	2	10.5	1.7	2	23	159	181	158	181	0.92
2	10	0.0023	0.33	13.0	1.9	2	23	206	228	205	228	0.93
3	10	0.039	5.6	9.1	1.6	2	23	252	273	251	273	0.96
4	10	5.4e-06	0.00077	21.3	2.0	1	23	277	299	277	299	0.98
5	10	0.68	97	5.2	1.5	1	13	304	316	304	317	0.91
6	10	1.7e-05	0.0024	19.7	1.8	3	23	337	358	335	358	0.96
7	10	3.7e-07	5.3e-05	24.9	1.4	1	23	365	388	365	388	0.98
8	10	0.0049	0.7	12.0	0.6	1	23	394	416	394	416	0.96
9	10	9.8e-07	0.00014	23.6	3.3	1	23	422	444	422	444	0.99
10	10	6.4e-05	0.0091	17.9	1.4	1	23	450	473	450	473	0.97

Sequence Information

Coding Sequence: ATGGAATCCTTTAATTCAGATATATCACTTTTGATAGACGTCAACTCCCTCGCTAACGCCGCGGTTATTGTACCATCAATTTTCGCCAACAATTTAGTCATCTCTATTTTTATGATGTCACATCTGAAAGAAGAGCTGTCCTCGTACGAGGACCTGGCCGATGACGCGGACGACGACAAGAAGCTGGCCGAGTTGTTGGGGCTCCGGCGCCTTGGAGCCACCACCGTGAGGAGGAAGGGCTCGCGGAAGAAGGACAAGCTCGGCAGGACTGaaaAGAAATTAAAGAAAAGATCATCGGAACCCCTCAAGTTGTCATTCTCAAGACTCTCAAAATTAGACAAGATCTACCCTCTGAAGTCGGGCAGCGACCGTAACTACGGGACAAGCGACGCCGTCAAACACAAAACCAACATGGACAACCTCATGAAGAACTCAAACTGTACGCCCTTCGCTAACAAAACGCTAGCCGGCATCACCTGCGTCTTCTGTAAGCAAACATACCAGAACCCACACGAATTACGCCTACACATGACAGACAAACACACGAACGACAGCATTCTAGACCCCACAAAAGACAAAAGCAATCTATCTTACAAACTAGACATATCAGACCTCAAATGCACTATATGCAACAAGAATTGCGACGTCATATCTAATCTCAAAACGCATCTCACAAACGAACATGACGTCAAATTCTATCCAGATGTACATGACTATATATTAGAATTCAAATTGACGGACTCGGAAATGCTAAAATGCGCCTTATGCCACTCGTCAtacgaaacatttaaaatgctGTTACAGCATATGAATGGACATTACAGGAATTTCATATGTGATGTTTGCGATTTAGGATTTATAAATAAGCATAAATTGAAAAATCACCAGCGTACCCACGAAATTGGTAACTTTAAGTGTTCGTTTTGCGAAAAGGAGTTCCCTACTCGAGTCAGAAAGATGTGTCATGAGAAATATACACATAATACATCGGCTAGGTATACCACAAATTGTCCTCAGTGCGACAAATCATTCACTAGTTACTATCAACGAAATAGGCATATGTTTACCGAACACAATACAGTAGCTGCCACTTACAAATGTAATATATGCGATAAGTCATTTATATTAAAGTCTAAATTGACATCTCACATAAAAAAGGTACATTTAATGGAAAGGAATCACATATGCACGGTGTGCGGTCAAGGATTCTTCATTAAACAATCGTTAGACGAGCATATGATAAAGCATAACGGTGAGAGAGTGTTTAAGTGCACGGTTTGTCACAAAGCATATGCAAGAAAGAAGACATTGAGAGAACATATGAGAATACATAACAACGATAGGAGGTTTAAATGTGGGGTGTGCGGTTTAGCgtttgtccagaagtgtagtatgAAAAGTCATATGCTGTCGAATCATGGCATCACACTAGCTGAATATGAAAGCTCGCATCCAGATGAAAGTAGGTCGCAAGACGTTGGTAGACTAGACGAGGGAGTGCAAGCTTAA
Protein Sequence: MESFNSDISLLIDVNSLANAAVIVPSIFANNLVISIFMMSHLKEELSSYEDLADDADDDKKLAELLGLRRLGATTVRRKGSRKKDKLGRTEKKLKKRSSEPLKLSFSRLSKLDKIYPLKSGSDRNYGTSDAVKHKTNMDNLMKNSNCTPFANKTLAGITCVFCKQTYQNPHELRLHMTDKHTNDSILDPTKDKSNLSYKLDISDLKCTICNKNCDVISNLKTHLTNEHDVKFYPDVHDYILEFKLTDSEMLKCALCHSSYETFKMLLQHMNGHYRNFICDVCDLGFINKHKLKNHQRTHEIGNFKCSFCEKEFPTRVRKMCHEKYTHNTSARYTTNCPQCDKSFTSYYQRNRHMFTEHNTVAATYKCNICDKSFILKSKLTSHIKKVHLMERNHICTVCGQGFFIKQSLDEHMIKHNGERVFKCTVCHKAYARKKTLREHMRIHNNDRRFKCGVCGLAFVQKCSMKSHMLSNHGITLAEYESSHPDESRSQDVGRLDEGVQA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00935982;
90% Identity: iTF_00033225;
80% Identity: -