Basic Information

Insect: Ectropis crepuscularia
Gene Symbol: -
Assembly: GCA_963693475.1
Location: OY856354.1:21842292-21846111[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 8.2e-07 0.00012 23.8 3.0 1 23 239 261 239 261 0.98

2 11 0.0003 0.043 15.8 4.4 1 23 267 290 267 290 0.95

3 11 0.00055 0.078 15.0 0.2 1 23 297 319 297 319 0.95

4 11 0.0045 0.63 12.1 4.5 1 23 326 348 326 348 0.97

5 11 0.54 76 5.5 2.8 1 23 354 376 354 376 0.94

6 11 0.057 8.1 8.6 4.0 1 23 382 405 382 405 0.95

7 11 0.0043 0.6 12.1 2.2 2 23 411 430 410 430 0.97

8 11 4.8e-06 0.00069 21.4 4.9 1 23 436 458 436 458 0.98

9 11 1.2e-05 0.0018 20.1 1.3 1 23 464 486 464 486 0.99

10 11 3.4e-05 0.0049 18.7 0.3 1 23 492 515 492 515 0.97

11 11 0.15 22 7.2 0.3 1 21 521 543 521 544 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	8.2e-07	0.00012	23.8	3.0	1	23	239	261	239	261	0.98
2	11	0.0003	0.043	15.8	4.4	1	23	267	290	267	290	0.95
3	11	0.00055	0.078	15.0	0.2	1	23	297	319	297	319	0.95
4	11	0.0045	0.63	12.1	4.5	1	23	326	348	326	348	0.97
5	11	0.54	76	5.5	2.8	1	23	354	376	354	376	0.94
6	11	0.057	8.1	8.6	4.0	1	23	382	405	382	405	0.95
7	11	0.0043	0.6	12.1	2.2	2	23	411	430	410	430	0.97
8	11	4.8e-06	0.00069	21.4	4.9	1	23	436	458	436	458	0.98
9	11	1.2e-05	0.0018	20.1	1.3	1	23	464	486	464	486	0.99
10	11	3.4e-05	0.0049	18.7	0.3	1	23	492	515	492	515	0.97
11	11	0.15	22	7.2	0.3	1	21	521	543	521	544	0.93

Sequence Information

Coding Sequence: ATGGCTAACGCAAAGAGTAGACTAAAAGCACCGAAAAGTGCGGCTACTAGAAAAGGACGTGGTAATTCAAAACAATCCTTGACAGGTGCGAAGGTTGCTCCCGAACCGAGTGCTAAGAGTAATGTAGTCATGGGACGCCCCAACTTGAAACCAATAAAAAATGAAGAGGTGCAGTTGTTATTTCAAAAAGAAGTGGATTTGAAAGATAAACTTAAATCACCCCAACGTAGTCCAAGGCAACGCCAAAAAAATTCACCAAAGAAATCTCCACCCACCCAAAGCAAACTCACAACAAGATCTCAAATTGTGACAAAAAGTGGACGaatcagaaaaaaaagtaaacgaaAATTGAAATTGATTGATAACATTCTTAAAAGTGAACTCATGATAGAAAGaaccaaaacattaaaaaatggtGATATAATTTCTGCAGttaagaaaacaaataataacaatgAACTTGGAATCAGCAATCAAAATGGCAcaacaaaaaattcaaatacAGTCAAGAGTGGATGCAAAAAACTGTCTGAAAACAAGTCTAAAAATACTTCAGAAGCTAAAgtaaataattcaaataaatctgaatctgataataaaaaaagtaaacagaAAACAGTGAATAAAAAATCCAAAGCGAATGCGAATGATAAGAATGTGTCAAAAACAAAACAGGTCACATTGAGCAACGGCTTAGTGCTCACTCTTACACTGTTTCAGTGTGATATTTGTAAGAAAATGTTCAGCAATAAATCTTCAATGCGTAGACACATCTACCGTCACATAAATCTAAAACCTCATGCTTGTAAAAAATGCTCCAAAAAGTTTCGAACGAAAGCAGTACTGCAGAGACATGTTAATAAATTTCACTCCGAGGTAAATGAACCATTTTTATGTAATATCTGTGACAAAACTTTCATGCTTGAAGAGAACTTGAGCTTACATCTAGCAAGTCATGTGAAAAATGAAAACTCATACAAATGTGTTTACTGTAACAAGAAATTTTCCTATCACTTGTTATTGTTGCAACATGAAAAGCAGCATCAAGTGACTGGGCGGTATCAATGCTCCATATGCAATATGAGTTATGACTGTCGTAACCGACTCTCTCTACACGTGAAGAGCCATCTACAAATTAAAGATCACATCTGTCAGTACTGTGGAAAAGAATTTTTGAGAATGAATTCTATGAGACGACATGTCCAGATCTGTCACGGAGGACACAGAATTCAATGTCCGATTTGTAAGAAGAAGTTGAAGGGGCACTTGACTGAACATATGAGAACACACAGGCAGGCCCGTCCACATGAGTGTGAGCATTGTGGCCAGAGGTTTACACAATCAACTCAACTGACTGTTCATCGCCGCTCACATACAGGTGCCAGGCCTTATGTGTGCAGGATCTGTAGTCGACCTTTCACACATTCTAATGCTTTGATGCTTCATATAAGACGTCACACTGGTGAGAAGCCTTTCCCTTGTGCAATGTGTCCCATGTCTTTCTCTCAGCTTCCACATATGAAAGCTCATATGCGCAATATACATGGAAAAGAGAATCCCTATAAATGCCCTAAACCCACCTGTGAACAGTTCTTTAAATTGAGGACTGAATTGGATGCACATTCTCAGACTTGTACTGTTGGTGAGCGAGAGCTAACATTTGAGGAAAAGATCGAAGCATCTGTGAAATATGAAGAAGTGGTGGTGGCATCCGCCATGAGTCTCTCTCGAATGAGGTTCCTGCTCGCCCTTCTCCTCACTATGATCGCTAACAAAGACAAGCTCAAGTTTTTAGGGTTCAACAAACGGCTAGTGGATGACCTTTTAATGGAGTGCCTCGAAGCGATGGGGCAGGTGCCGTGTCGGGATATAACCTTGACTCCTTTCAACCGTctgaaaacaaacattcagcTGCTATTAAATGAAACCGTTCCCAAAGATCAAATGGATAAGTTCCTCGAAGAAAACAAGACGACAGAGGATATCTTGGAGCTCCTGGCCgatgagaagaagaagaaagagtGA
Protein Sequence: MANAKSRLKAPKSAATRKGRGNSKQSLTGAKVAPEPSAKSNVVMGRPNLKPIKNEEVQLLFQKEVDLKDKLKSPQRSPRQRQKNSPKKSPPTQSKLTTRSQIVTKSGRIRKKSKRKLKLIDNILKSELMIERTKTLKNGDIISAVKKTNNNNELGISNQNGTTKNSNTVKSGCKKLSENKSKNTSEAKVNNSNKSESDNKKSKQKTVNKKSKANANDKNVSKTKQVTLSNGLVLTLTLFQCDICKKMFSNKSSMRRHIYRHINLKPHACKKCSKKFRTKAVLQRHVNKFHSEVNEPFLCNICDKTFMLEENLSLHLASHVKNENSYKCVYCNKKFSYHLLLLQHEKQHQVTGRYQCSICNMSYDCRNRLSLHVKSHLQIKDHICQYCGKEFLRMNSMRRHVQICHGGHRIQCPICKKKLKGHLTEHMRTHRQARPHECEHCGQRFTQSTQLTVHRRSHTGARPYVCRICSRPFTHSNALMLHIRRHTGEKPFPCAMCPMSFSQLPHMKAHMRNIHGKENPYKCPKPTCEQFFKLRTELDAHSQTCTVGERELTFEEKIEASVKYEEVVVASAMSLSRMRFLLALLLTMIANKDKLKFLGFNKRLVDDLLMECLEAMGQVPCRDITLTPFNRLKTNIQLLLNETVPKDQMDKFLEENKTTEDILELLADEKKKKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00034092;
90% Identity: -
80% Identity: -