Basic Information

Insect: Ectropis crepuscularia
Gene Symbol: -
Assembly: GCA_963693475.1
Location: OY856362.1:9102936-9119066[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00018 0.026 16.4 1.3 1 23 210 232 210 232 0.97

2 10 0.26 37 6.5 0.0 2 20 260 278 259 280 0.93

3 10 0.001 0.15 14.1 0.5 3 23 305 325 304 325 0.98

4 10 2.7e-06 0.00038 22.2 0.2 1 23 329 351 329 351 0.98

5 10 0.47 67 5.7 0.4 1 23 356 379 356 379 0.93

6 10 0.19 27 7.0 0.4 1 23 385 408 385 408 0.92

7 10 7.6e-05 0.011 17.7 0.7 1 23 415 438 415 438 0.98

8 10 2.7e-05 0.0038 19.1 2.3 1 23 444 466 444 466 0.98

9 10 9.3e-06 0.0013 20.5 3.4 1 23 472 494 472 494 0.98

10 10 7.7e-07 0.00011 23.9 0.9 1 23 500 522 500 522 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00018	0.026	16.4	1.3	1	23	210	232	210	232	0.97
2	10	0.26	37	6.5	0.0	2	20	260	278	259	280	0.93
3	10	0.001	0.15	14.1	0.5	3	23	305	325	304	325	0.98
4	10	2.7e-06	0.00038	22.2	0.2	1	23	329	351	329	351	0.98
5	10	0.47	67	5.7	0.4	1	23	356	379	356	379	0.93
6	10	0.19	27	7.0	0.4	1	23	385	408	385	408	0.92
7	10	7.6e-05	0.011	17.7	0.7	1	23	415	438	415	438	0.98
8	10	2.7e-05	0.0038	19.1	2.3	1	23	444	466	444	466	0.98
9	10	9.3e-06	0.0013	20.5	3.4	1	23	472	494	472	494	0.98
10	10	7.7e-07	0.00011	23.9	0.9	1	23	500	522	500	522	0.98

Sequence Information

Coding Sequence: ATGGATGCCGATATAATAGTGGAGAGCTTACCCCAGCTGGGTGTGTGTAATTTGTGCTTGAACGAAGGTGCAGTGAAAAGTATGTTGTTAGAGCATAAACACAATGGAATTTCTGAAGATTACTCGGAGATGCTGCAAAAATGCTTCTCAATCGACATATCGGTGTTGGAGCTGGGTGACACGAAGCGTCTGATCTGCGACGGCTGCGTGTCGCGGCTGCGCGACGTGGCGACCTTCCGGCGACAGGTGGAAGACTCGCTTCGGGTGCTCGAGACCAGCTGCAAGCTGCACACTCACTTCCGGCGGCTTGTGGCGGACTCGCTGCGAGAGCTGGAGGCCAGCTGCAAGCTGCACAAGGAGTCTCCCGTGAAGCAAGAGGTGGCGGAGGCCGCGTTCGACGATTATTTCGACTTACCACCTGACGATCTTCACGGCGACGATCTGGACGACGATGTTAAAGATAAAGATTACAAACCGTTGATCAAAGAGGAGACACCCGAACTAAAAAAACCGAAAAAGTCCAAAAAACCGATTAAATACTCGCGCAAACTCCCACACGACATCCACGAGACAGAGTCCATGATACAATCCGGACTTTTTCCATTCAAAATACGGAAAAACCGATCTTTTTCATGCTCCATATGTCCGGAAACTTCGAAGAGTCTGGATGACCTAAAGACTCATATATGTCAGCATACGAAATACAACATACATTTGGCTTTCAACAAGATGATGTTCTCAGACTCCCACCGGTTTTATAAGTCAGCGACTCAACTCAGATGCAAAATCTGTACCGCTGATATCTCAACCTTCGACGAGTTGAAAGAGCATATAGAGAATTGCACACGATTGAAATTCGCACCGAAAACGTGGAATAATCTACCATTTAAGTTGGAAAAGGATCAAGTGGACTGTCCCGTTTGCAAGAAACGTTTTCTTAACTTTGTCAGTTTGAATACACATATGAATGTCCACTATCCGAACTATATATGCGAGAGTTGTGGTAAAGCGTTCGCTTCGAAAGCTAGATTGAGGGGTCATATGAGGACGCACGAAGAGGGTCAGTTTGCGTGTAGGTTCTGCGATGCCGTTTTCGATAGGGTCACAAAACGGGAGAATCACGTATCGAAAGAGCATAAGGCGGGGGTAAGGTACGCTTGCAAACGCTGCAATATAACTCTGACATCGTTCTACGCCCGTCAGAAACACTTAGCCGAAGTTCACAATGAAGAATTGAAGAGATACAAATGCAAAGCGTGTCCACAAAGCTATATAACACCAGGTCACTTATCCAGTCATGTGAGAAGGGATCATTTGAATGAGCGGAACCATAAATGTGATAAGTGTGATTTGGCGTTCTACACGAAGAATGCTTTGAAGATGCATATGATTAAACATGATGGGGAGAGAATACATGTGTGTAATGTCTGCCAGAAATCGTATCAACGGAAGAAGACCCTGAGAGAGCATATGCGGATTCATGATAATGATAAGAGATTTGTGTGTCCGGTTTGTGGGCGGGCGTTCACACAAAAGTGCACATTGAAAGGACATCTCAGAGTGCACGAGAGGAAGGTGGAAGTTGATGATAGGGTGGGACAACCGTTGCATTCTGTTGCAATTTGA
Protein Sequence: MDADIIVESLPQLGVCNLCLNEGAVKSMLLEHKHNGISEDYSEMLQKCFSIDISVLELGDTKRLICDGCVSRLRDVATFRRQVEDSLRVLETSCKLHTHFRRLVADSLRELEASCKLHKESPVKQEVAEAAFDDYFDLPPDDLHGDDLDDDVKDKDYKPLIKEETPELKKPKKSKKPIKYSRKLPHDIHETESMIQSGLFPFKIRKNRSFSCSICPETSKSLDDLKTHICQHTKYNIHLAFNKMMFSDSHRFYKSATQLRCKICTADISTFDELKEHIENCTRLKFAPKTWNNLPFKLEKDQVDCPVCKKRFLNFVSLNTHMNVHYPNYICESCGKAFASKARLRGHMRTHEEGQFACRFCDAVFDRVTKRENHVSKEHKAGVRYACKRCNITLTSFYARQKHLAEVHNEELKRYKCKACPQSYITPGHLSSHVRRDHLNERNHKCDKCDLAFYTKNALKMHMIKHDGERIHVCNVCQKSYQRKKTLREHMRIHDNDKRFVCPVCGRAFTQKCTLKGHLRVHERKVEVDDRVGQPLHSVAI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00827272;
90% Identity: iTF_00635658;
80% Identity: -