Ecre009099.2
Basic Information
- Insect
- Ectropis crepuscularia
- Gene Symbol
- Zfy1
- Assembly
- GCA_963693475.1
- Location
- OY856342.1:10280830-10292274[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 6 8.5e+02 2.2 0.1 13 23 253 263 238 263 0.88 2 10 0.00013 0.018 16.9 0.1 1 23 269 291 269 291 0.97 3 10 2.2e-05 0.0032 19.3 1.2 1 23 300 322 300 322 0.98 4 10 0.0011 0.16 13.9 0.2 5 23 331 349 330 349 0.97 5 10 1.9e-05 0.0027 19.6 6.1 1 23 355 377 355 377 0.99 6 10 3.1e-07 4.4e-05 25.2 1.1 1 23 383 405 383 405 0.99 7 10 2.1e-06 0.0003 22.6 0.4 1 23 411 433 411 433 0.98 8 10 9.2e-05 0.013 17.4 0.7 1 23 439 460 439 460 0.97 9 10 1.4 1.9e+02 4.3 2.5 2 23 467 490 466 490 0.89 10 10 2.7e-06 0.00038 22.2 1.3 1 23 496 518 496 518 0.98
Sequence Information
- Coding Sequence
- ATGGAAGCCCCAGTCCTTGTGGTCTTCGTGGCCTCCCTTCTTGCCGTGGTGgtcgtggtggtggtggtggcctTCGTGTCCGTGGTGTCCCTTGTGTCCGTGGTGGCCCTCGTCGTAGTGGTGCTTGTCGTGGTGTCCGTGTTTTCCGTGGTGGCCTTCGTGGTGGCCGGAGTGGTGGTGTCCTCCCTTCTTGTGTCCGCCGCCGTGCTCCCCGTGGTGATGGTGGTGGTGGCCGTGCTTGTGGTGCTTGCCCTCGTCGTGGTGGCCGTCGTGGAAGTGGTGGTCTTTATGGAAGTGGTCTTTGTGGTGTTTCTTGTGGTAGCCGTCGGTGTGCTCGCCCTTGTCGTGATGTTCGTGGTGGCCGTGCTTCCCGCCTTTATGGTGGTGTCCATGCTCGTGGTGTTCGCCGTGGTGGTCGTGCTCGTCCCAGTGCTTTTTGTGTCCGCCGCCGTGTTCTCCATGGTGTTCCTCGTGATGGTGCTTCCCATGACCGCCATGGTCGCCtttgtggtgatgatggtgaCCTTTGTGCCCCTTGCCACCCTTCCCGCCGTGATGATGGTGATGGTCCGCATGGTGCTCATGACCACCGCCGCTCTCGTGGTGATGCCCCTTACTCGCTGCCACCGCCTGATCCTCGCCCTCCGCCTCGTGAGCGACGCATACCGCCACCAGGCACAACACTCCTATCAATACAAGACCTCTCATTGTTGCGGTACAAACCTCTGCAGGTGTACTGAGAGGAAGTCCGGTTatCGCACAGCGCTGCGTCGCCACATCGAGCGTCACATGTCGCGTCGCAAGTTCGCGTGCCTGCGGTGCGGCGCGGCGTTCGTCGAACGTTACGCGTTGCGGCGCCACTTACGCGTTCACACCGGACAGGCCGTCGAGAAGAAACACAAGTGCACGCAGTGTGATAAAAGGTTTTCTTGGGCGGGCGATCTCACGGCGCACATGTCGACGCACGGCGGCGAGCGCGGTTTCGTGTGCGAGTGCGGCGCCGCGTTCGCGACACAACGCCTGCTGACGTCACACCAGCGTATCCACTCCAGCGACAAGCCGTACCAGTGCACATACTGCGACAAACGATTTCGCCATGAGTCGACGCGTAATACACACCTACGCACGCACACAGGCGAGCGGCCGTACGTGTGTGCGCAGTGCGGGAAGTCGTTTATACAACACTCCAATATGGCGTTGCATATGCGGACACACACAGGCGAAAGACCGTATCCGTGTACGAAGTGTGAACGCAAGTTCGCGTCGAGTTCCAGTCTCAAGGCGCACATCGGGACCCACACGGGCGAACGCCCTTTCTCCTGTAATGTTTGCGGGAAGAAGTTTGCGAGGGTGAGTCTAAAGAGTCACATGCGGTGGCACAGCGGCGAGCGAGAGCACGCCTGCCCCGCGCCCTCGTGTCTCAAGCGGTTCGCGACCAAATACCGCCTCATGGAGCACTGTCGCCAACACACCGgcgaaaaaccatttgaatgcgCCAACTGTTCAGCGAAATACTCAAGGAAATCTCAGCTCATAAGGCATATGAAGACACACGAGAAGAAGAAACCCGGCAAAAAAGGTGTCATGTTGATGCCAGTGACGGTCTCCGATAAAAACCTTCCATCAGCTCCCACGACACAACCAGACAATACTGAATACATGTTCGTAAACTTAAATGATCCAAACACGGATCAAGTACAAGAAATTCCTTTAGAGTCGGAAAAACTGCTTTATGGCAATGATAATGACGTAAAAACTGAAGTGATTGTTCTGGATAACAATCCCAACTTAGTCACCAATAGTGTGAGTTATATGGATGATATGAATTATACTAATAACGTGAATCTAATGCCTATGAATGAAGAAGAGGTTAGCATATCGGATGCCAGTGCTATCGACGGAGCTACGGTCAAGCTTTACCAGTATGACCAAAGTTTAGTGCAAATTCAAACTGAGGATGGACATTTGACTATTAGTAGAATTACAGTGCGGCCAACGGCAGAATGCGATCCCGAGAGGGCGTGA
- Protein Sequence
- MEAPVLVVFVASLLAVVVVVVVVAFVSVVSLVSVVALVVVVLVVVSVFSVVAFVVAGVVVSSLLVSAAVLPVVMVVVAVLVVLALVVVAVVEVVVFMEVVFVVFLVVAVGVLALVVMFVVAVLPAFMVVSMLVVFAVVVVLVPVLFVSAAVFSMVFLVMVLPMTAMVAFVVMMVTFVPLATLPAVMMVMVRMVLMTTAALVVMPLTRCHRLILALRLVSDAYRHQAQHSYQYKTSHCCGTNLCRCTERKSGYRTALRRHIERHMSRRKFACLRCGAAFVERYALRRHLRVHTGQAVEKKHKCTQCDKRFSWAGDLTAHMSTHGGERGFVCECGAAFATQRLLTSHQRIHSSDKPYQCTYCDKRFRHESTRNTHLRTHTGERPYVCAQCGKSFIQHSNMALHMRTHTGERPYPCTKCERKFASSSSLKAHIGTHTGERPFSCNVCGKKFARVSLKSHMRWHSGEREHACPAPSCLKRFATKYRLMEHCRQHTGEKPFECANCSAKYSRKSQLIRHMKTHEKKKPGKKGVMLMPVTVSDKNLPSAPTTQPDNTEYMFVNLNDPNTDQVQEIPLESEKLLYGNDNDVKTEVIVLDNNPNLVTNSVSYMDDMNYTNNVNLMPMNEEEVSISDASAIDGATVKLYQYDQSLVQIQTEDGHLTISRITVRPTAECDPERA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -