Basic Information

Insect: Ectropis crepuscularia
Gene Symbol: -
Assembly: GCA_963693475.1
Location: OY856362.1:10482151-10492172[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.1 1.5e+02 4.6 2.2 3 23 42 62 40 62 0.92

2 16 0.063 9 8.5 1.1 2 23 90 112 89 112 0.83

3 16 4.3 6.1e+02 2.7 0.5 2 23 133 155 132 155 0.94

4 16 1.8e-05 0.0025 19.6 1.5 1 23 160 183 160 183 0.96

5 16 2.7e-05 0.0038 19.1 1.3 1 23 187 210 187 210 0.95

6 16 0.051 7.3 8.8 0.4 2 23 213 235 212 235 0.95

7 16 0.16 22 7.2 0.4 2 19 242 259 242 262 0.92

8 16 0.00047 0.067 15.2 3.3 1 23 347 370 347 370 0.93

9 16 0.31 44 6.3 0.1 3 23 401 422 399 422 0.94

10 16 0.00054 0.076 15.0 0.7 1 23 443 466 443 466 0.95

11 16 0.17 24 7.1 0.5 3 21 474 492 473 493 0.93

12 16 4.3e-06 0.00061 21.6 0.5 1 23 501 524 501 524 0.96

13 16 0.0003 0.043 15.8 0.5 1 23 529 552 529 552 0.96

14 16 0.0001 0.014 17.3 0.8 1 23 556 579 556 579 0.98

15 16 0.00058 0.082 14.9 1.4 2 23 586 607 586 607 0.95

16 16 5.5e-06 0.00078 21.2 0.8 1 23 613 635 613 635 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.1	1.5e+02	4.6	2.2	3	23	42	62	40	62	0.92
2	16	0.063	9	8.5	1.1	2	23	90	112	89	112	0.83
3	16	4.3	6.1e+02	2.7	0.5	2	23	133	155	132	155	0.94
4	16	1.8e-05	0.0025	19.6	1.5	1	23	160	183	160	183	0.96
5	16	2.7e-05	0.0038	19.1	1.3	1	23	187	210	187	210	0.95
6	16	0.051	7.3	8.8	0.4	2	23	213	235	212	235	0.95
7	16	0.16	22	7.2	0.4	2	19	242	259	242	262	0.92
8	16	0.00047	0.067	15.2	3.3	1	23	347	370	347	370	0.93
9	16	0.31	44	6.3	0.1	3	23	401	422	399	422	0.94
10	16	0.00054	0.076	15.0	0.7	1	23	443	466	443	466	0.95
11	16	0.17	24	7.1	0.5	3	21	474	492	473	493	0.93
12	16	4.3e-06	0.00061	21.6	0.5	1	23	501	524	501	524	0.96
13	16	0.0003	0.043	15.8	0.5	1	23	529	552	529	552	0.96
14	16	0.0001	0.014	17.3	0.8	1	23	556	579	556	579	0.98
15	16	0.00058	0.082	14.9	1.4	2	23	586	607	586	607	0.95
16	16	5.5e-06	0.00078	21.2	0.8	1	23	613	635	613	635	0.98

Sequence Information

Coding Sequence: ATGCAATCAAaagGTGTAAGCGTCAAACGGATAACGTTACCGATAGAGAAAAGACGCCGGAACCTCgagattttgttcaacaatACCACGATTCTACCATTTAAACATCGCGGACAGTGCTTGTGCTTTTTCTGCGGTTTCAAAGTGAAAAACCGTCAACAATTGGTCGAACATACCGTCCTCCACTTACCGTGCAATACCAAAATACGTGCGTTGAAATCTCTCAATATAGCCGACTTTGAAATCAAAGTCGACGTCTCCCATTTACAATGCAAAATCTGCTCGGAAACCTTCAACAACATACACAATCTAGGGTTCCATTTGGCTCGGAAACATAAGCTACATTACGACCTCGGCACCGCGGTCAGTTGCGCTCCCTACAGACTGATCGACTTAAAATGTCTCGTGTGCTTCAAGCAGATGAACAGCGTCAGAGGACTCATCCAGCATACCAATAAAGAACACCCGGTTAACTACTACGAATGCGCCGACTGCGGTAAGAAATATCGACGGAAACATGACTTGTCTGGTCACATCAACCAAACGCACAAAGAAGAATACAAGTGCCCGAAATGTCCGGAGACCTTCAAATCTAAACGAGAGTATATGACGCACAAGAATGAGGGTCACATCTCGCAGTGCAATGTCTGTTTCGTCACGTTCCCATCGTATGCGATGCGACTCAAGCATATGAAAGATGAACACGAAATATCAACCGGTGGCGTTTGCGGATTCTGCCGTAAGACTTTCAATTCGAGATTTGCGTTTTTAGATCACGCCGGGAAGTGCTCCTTTGGGGTGCCAATGAATGTTGAGGTGGCTCTGGCATCAGTCAAACCGGAAATTGATATGGTTGACATGAATATGTTTAAGCCAGTAAAGATTGACACAGACACAACTGACACGAAAGTTCCTGTCGAACCCGCAACCGTCACTGAGATGGTAGCCATGCGAGAAGCGAAGAAAGCGGCCAGGAATAGCATCGCATACGTCTTCAACAACACAACAATCATTCCATTCAAACGATTCCACAACCGATTCCGCTGCTTTTACTGCCCGAAAGAGTTCACCAGTTGCAACGATCTCAGGAACCATTCAATGGAAGAGCATCCCGTTTGCGATGTCAAAACGAAGTGTATGAAACTCAGCGGCTTTGGCTACCAATACATGTGGATCAAAGTTGACGCATCCATCCTGGCTTGCAAGATCTGCAATGATCAATACGTAGACTTCAAAAGTCTGCTGGCTCATTTAGAAATCGAACACGAGGCGAACCTTGGAGATTGTGGCGACAAATTACTACCCTTTAAACTGGTCGATGATTCATACCCTTGCCCGCATTGCGGAGCAACGTTCTCCAACTTTGGAAATACTCTGATACATTTCAATAGAGAACATAATACCGAAAACAGAGTACTGTGCGTCACTTGCGGCGAATCGTTCCACAGTCTAACATCGATGCAGATACACAAAAACCGCTGCAATATGGCCCCAGATCGATTCAAATGCGCCAAATGCGACGTCGGATTCTACAACAAGAGTCAATTAACCCGGCACATGGGTATGGCCCACAAAAAGAAGGTCTTCAAATGCCCTGACTGTCCGGAAGCATTTTCGTCTGAGCACGCAAAAATGACCCATATAACTAAAGAGCATAACGGCGGTTACAAATGCCTGCAATGCGACGCGTCTTTCATATTCCGTTCGCGTCTCATTCAGCATATTCGAAGACTGCATCTCCTTGAGAAGAACGAGAAATGTCCGTTCTGTGATAAAATGTTCTTCGATCAGCGCCGGTTGAAGAATCATTTGGTTCTGCACACTGGCGAAAGAGCCTTCAGCTGCGACTATTGCGACAAAACATTTTCGTGGAAGAAGAACTTGATCAGCCACATCAATGTCCATTTGAAGAATTCTGGTCTCGATAAGAAAAGACGCGAACGGAAGCTGTTATCACTATAG
Protein Sequence: MQSKGVSVKRITLPIEKRRRNLEILFNNTTILPFKHRGQCLCFFCGFKVKNRQQLVEHTVLHLPCNTKIRALKSLNIADFEIKVDVSHLQCKICSETFNNIHNLGFHLARKHKLHYDLGTAVSCAPYRLIDLKCLVCFKQMNSVRGLIQHTNKEHPVNYYECADCGKKYRRKHDLSGHINQTHKEEYKCPKCPETFKSKREYMTHKNEGHISQCNVCFVTFPSYAMRLKHMKDEHEISTGGVCGFCRKTFNSRFAFLDHAGKCSFGVPMNVEVALASVKPEIDMVDMNMFKPVKIDTDTTDTKVPVEPATVTEMVAMREAKKAARNSIAYVFNNTTIIPFKRFHNRFRCFYCPKEFTSCNDLRNHSMEEHPVCDVKTKCMKLSGFGYQYMWIKVDASILACKICNDQYVDFKSLLAHLEIEHEANLGDCGDKLLPFKLVDDSYPCPHCGATFSNFGNTLIHFNREHNTENRVLCVTCGESFHSLTSMQIHKNRCNMAPDRFKCAKCDVGFYNKSQLTRHMGMAHKKKVFKCPDCPEAFSSEHAKMTHITKEHNGGYKCLQCDASFIFRSRLIQHIRRLHLLEKNEKCPFCDKMFFDQRRLKNHLVLHTGERAFSCDYCDKTFSWKKNLISHINVHLKNSGLDKKRRERKLLSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -