Ecre039886.1
Basic Information
- Insect
- Ectropis crepuscularia
- Gene Symbol
- -
- Assembly
- GCA_963693475.1
- Location
- OY856362.1:10515541-10527423[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 0.0045 0.64 12.1 0.0 2 21 66 85 65 88 0.89 2 30 0.0014 0.2 13.6 0.2 2 23 94 116 94 116 0.93 3 30 0.0033 0.47 12.5 3.3 2 23 121 143 120 143 0.95 4 30 0.2 29 6.9 0.7 1 23 148 171 148 171 0.96 5 30 0.3 42 6.3 0.2 1 20 225 244 225 247 0.93 6 30 0.057 8 8.6 0.2 2 23 279 301 278 301 0.95 7 30 0.015 2.1 10.4 0.4 3 23 325 346 324 346 0.95 8 30 0.00072 0.1 14.6 1.0 1 23 351 374 351 374 0.97 9 30 0.0061 0.86 11.7 0.4 1 23 379 402 379 402 0.95 10 30 0.01 1.4 11.0 0.2 3 23 409 430 408 430 0.93 11 30 0.00039 0.055 15.4 0.5 2 23 438 460 437 460 0.97 12 30 0.0065 0.92 11.6 0.1 2 23 467 488 466 488 0.96 13 30 3.9e-06 0.00055 21.7 1.8 1 23 494 516 494 516 0.96 14 30 0.0045 0.64 12.1 0.9 3 23 523 543 522 543 0.97 15 30 9.2 1.3e+03 1.7 0.0 2 23 668 690 667 690 0.87 16 30 0.16 23 7.2 0.4 2 23 713 735 712 735 0.95 17 30 4.2e-05 0.0059 18.5 0.6 1 23 740 763 740 763 0.94 18 30 0.00094 0.13 14.2 2.2 1 23 766 789 766 789 0.97 19 30 0.12 18 7.5 1.0 1 23 795 818 795 818 0.95 20 30 0.00068 0.097 14.7 1.7 2 23 826 848 825 848 0.95 21 30 0.11 16 7.6 0.8 1 23 853 875 853 875 0.98 22 30 3.9e-07 5.5e-05 24.9 0.6 1 23 881 903 881 903 0.99 23 30 0.085 12 8.1 0.6 1 23 1019 1041 1019 1041 0.98 24 30 1.1 1.6e+02 4.5 0.1 2 23 1067 1089 1066 1089 0.95 25 30 0.00087 0.12 14.3 2.1 3 23 1142 1163 1141 1163 0.98 26 30 0.00059 0.084 14.9 0.6 1 23 1168 1191 1168 1191 0.97 27 30 0.037 5.3 9.2 3.4 1 23 1197 1220 1197 1220 0.98 28 30 0.0022 0.31 13.1 0.9 2 23 1227 1249 1226 1249 0.95 29 30 0.054 7.7 8.7 2.3 1 23 1255 1277 1255 1277 0.95 30 30 0.0052 0.74 11.9 0.8 1 23 1283 1306 1283 1306 0.87
Sequence Information
- Coding Sequence
- ATGCAGACGTGtaaaggtgaaaaatcttgCATCAAACTGGATATCAATGGTCTGGCTTGCAAACTTTGCCAACAACCCATGTCTGATTTAAAAACGTTCGTAGACCATGTCGTTGGAGAGCACAAAGCCGACTATGACAAAACTGTGCCGTTTAAAGATTGCTTCGAAGCCTTCCAGCTCACTCAAGGCAAGATACCTTGCCCGGAATGTCAGAAACCTTTCGCATATTTCGCGACATTGCTGAAGCATTTAGGCGCGGAGCATAACCACCATAAAGCTGTTTGCGCTTACTGCGGCCGAGGATTTCGAACAACCACGAGCTTGGCAATGCATATCACCAACTCTCATACCGGAACATGTGAATGTACCATTTGCAATGCGAAATGCAAGAACTCGGCCGCTTTATCGCGTCACATGGCCCGGTTTCATGACGCTAAAGATTTTAAATGCTCGCAGTGCCCTGAGCTATTCGAGACGATATATAAAAAGCAAAATCATTTGATCAAAGCACATAATGTTGGACACAAATGTGGTTATTGTCCAAAATTTAATGCAGTGGAAGACCATAATAAGAAAGTGGACTTCGCACGTAAGCTATTCATAAAACGGCGTAACATCGAATACGTTCTGCAGTATTGTAACGTTACCCCATTCCTGTGGTACAAATCAAAGTACATTTGTTTCTACTGCAACGAGCCAATGAAGGATCTAGATAGCTTGAGGCAGCATACTCCTATCCATAGAAACACTAATCTTGAGCTTGTGGTCTTCGATAGGACGAAAAGTAAAAGAAACAAAGACGCGGCAATCAAGATTGATGTCCCCAACGATATAAAATGTAAGCTCTGCACAGAGACTTCTAATTCATTAAAAGAATTCATACAACATATCATCATAGCGCATGATGCCGAATATGACGTAAGCATCCCCAATTGTTTCCTACCATTCAAACTCGACAGAGAACAGCCTATTTGCGGAACGTGCAACGAGAAATTCGTGTCATTTGAGTATCTGCTGAGGCATGCAAACAAAAACCACCTCTCTCACCAGTATATTTGCGATGTTTGTGGCGTGAGCTTCCAAGGGCAAGTGCATTTGAGGATGCACTACAGGTATTACCATAGAGAAGGGGGTTATACTTGTAAGCTATGTGATGTCAGCTTTGATACGCTTGCAAAGATGATGCAGCATGAAAAGAACGCGCACGATGTGAAGCTATCTGCATGCCCTCATTGCCCTGAAGTGTTTAAGAGTCCCTATGTGAAGAAGCTTCATATGGCGAACGTGCACGGCGTCGAAGAGATGAAAATCAAATGTCCTCATTGTCCGAAAGTCTACCCCCAGGAGAGTATAATGTCCCGGCACATGAGACGCGTTCATTTGCGTGAAAAGAATGTGGAGTGTGAAGTTTGCGGGGACAAATTCTTTGGTCCATACGAACTAAAGTTACACATGCTCAAGCACAACGGGGATAAGAACTTCGCCTGCAGCGTTTGCGGGAAGAAATTCTCCAAGAAATGCAATTTGAACGCTCACATGGCTTTACATAGGAGGGACAAAAAGATATGCTCGATTTGTGATACACATTTCGCTAGTGACAAGGACCTGAAGGAACACGCGAAGAGTCACGAAGAAATCGAAGTAGGCAACATACTTGATGATATAGCAGACAATAGTATGGGCGAGATTATTGAAGATGTGACTGAAATACAAATGGAAGTTATTCAAGATGGCGGAACGGGgagaaaaatacataaaagtaGCCTCGACCGCCTCAACGTTCTCCGGAGAAACATAAGCACCGTGCTTCGCTTCTCTAACGCCGTGCCCTTCAACTGGAACACCAAGGGCTTCCGTTGTTTCtactgttgtaaacaaacacaaGATTGCTACCAGCTAATCAACCATACCGGCAAACACACCCCTTCAGACATTGACCAATTTATCGCCAAGAACATCATCACCAAAGATGTTCCCGTCAAAATTGATATCAGTAAACTTAAATGCAAAGTCTGCTCAATACCATTAGCCAAACTGGACGATCTAATCCCTCATATCATAGAATCCCATAAAGAAGAATACGATCACTCGGTGGGAGTATGTTTCTTCCCGTTCGTTCTGAACAAAGAAGTGATGCAGTGTGTGATTTGCCAGAATAGTTACGACAATTTCGCTAGCATGACCAGTCACATGTACAAGGAACATATCAATCATACTTTTATCTGTCAGATTTGTGGTCTCAGCTTCAAAGACCAGGTCCGATTGAAGAGGCATATCACATATAGTCACGTCGGATTCAAATGCACTGTCTGCAAGAAAACATTCGCAGTTTTGAACAAATTGAATATACACAAGCAGCGTTTTCATGGTCAAGTGAAATTGCATGACTGTAACTTGTGCAGTGAGAAGTTTTTGAACAGTTATCAAGTGAAAGTCCATATGGGGACAGTGCATAACGTCGAAAAGTATAAGATTAAGTGTGAGCATTGCCCGAAAGTCTGTACTACTAAAGGGGCCATGCTAATTCATATGCAAGGTCGACATACAAAGATCAGATACCAATGCGACTTATGCGATTACAGCACTGGAATCAAATGGCAGATTAAGCTCCATAAGCGGAAGCATTTCGGGGTGAAAGAGTATACTTGTAGCATTTGCGAGCGACAGTTTGGTAGATCCAGCAATCTCAGGGCCCATATGAAAGTGCATACTGGAGAACCTAGAGGTGGCCAGAAAATCGTAGCAGCCAAACCAAAAGCCGAAACCCTCCCGAAGACTAAACCCAAAACTGGAACAATCGTAACTAAACCAAAAGCTGGAACTGTTTTAGCGTCTAAGCTGAAAGCTAGCAAACTCAAAAGCACCACGTTGAATACAAAGTCCCCTAGCGTTAAAGAAATCATCGACAAAGACCTTGCGCCACCTGTTAACATCCTACAAAAGAAAGGTCCCAAACGACTCTCAGCCAGAGAGAAACGCAACTTAATGATCCGTAACGTCACTCAAGTCTTGTTAAAGACCACAGTAATGCCCTTCAGGTGGCTCAAAAGTTCCTATCGTTGCTTCTATTGCTATGACATATTTCAAGAAGCATCAGAACTCAAAGAACATCAGTCTGTCCATAAAGGACAGGATTTTATCGAGAAGGCGATGAATAACTATTGGGAACCAGTCGTTTATTTGGATATTTCGGAGATGAGGTGCAAATTGTGTCCAGAAGACATTACAGACCTCTATGAAATGATCGATCATTTAGTTACAAAACATGATGTGGTATTCAATAAAGATATTGGCATGTGTATGGTCGCTTTCAAGCTTGATAACCTCAACATCTTTTGTCTGAGTTGTGGAGCTGCCTTCTTTACTTTCGGACCTTTGCTCTGCCACACGAATAAAGCTCACAAAGGCACTAACGTACTCCTTTGTGAAGTGTGTGGCCAGCATTTTAAACACGCAAATCTATTACGGTTACATGTGAAAACAGTtcacgagaaagctagcttccCCTGCACTGATTGTGACGAAAAATTCCTGACTCCGGCAAAGTTGAAAACTCATCAGAAGAGTCAGCATTTCGTCGTGAAAAGGTACAAATGTCTGGTTTGCACGGAGACATTCCAGAGTCACTATAAGCGGTCGAGGCACATGGCAACGGAGCATGAGAATAGGAAAGTTATCAAGTGTCTTCAGTGCCCCAAGACCTTCATTTTCCGGAGTATGATGATGACGCATTTGCGGGATACACATTTGAAGGTGCGGAACCATATGTGCAGTGTTTGCGGATGGCGAGCGTTCAACAGTAACCGATTGAAGAACCATATGTTTAAGCATAGTGGGGAGAAGAATTTTAAGTGTGAAGTTTGCGATAAGGCTTTTTCTACGAGGAAGATTATGATGGCGCATTTTTCGAGAATGCACAGGGCACCACAACAGCCTGTCGTAGCGTACGCTAATGCCTATGGACCACAGTAA
- Protein Sequence
- MQTCKGEKSCIKLDINGLACKLCQQPMSDLKTFVDHVVGEHKADYDKTVPFKDCFEAFQLTQGKIPCPECQKPFAYFATLLKHLGAEHNHHKAVCAYCGRGFRTTTSLAMHITNSHTGTCECTICNAKCKNSAALSRHMARFHDAKDFKCSQCPELFETIYKKQNHLIKAHNVGHKCGYCPKFNAVEDHNKKVDFARKLFIKRRNIEYVLQYCNVTPFLWYKSKYICFYCNEPMKDLDSLRQHTPIHRNTNLELVVFDRTKSKRNKDAAIKIDVPNDIKCKLCTETSNSLKEFIQHIIIAHDAEYDVSIPNCFLPFKLDREQPICGTCNEKFVSFEYLLRHANKNHLSHQYICDVCGVSFQGQVHLRMHYRYYHREGGYTCKLCDVSFDTLAKMMQHEKNAHDVKLSACPHCPEVFKSPYVKKLHMANVHGVEEMKIKCPHCPKVYPQESIMSRHMRRVHLREKNVECEVCGDKFFGPYELKLHMLKHNGDKNFACSVCGKKFSKKCNLNAHMALHRRDKKICSICDTHFASDKDLKEHAKSHEEIEVGNILDDIADNSMGEIIEDVTEIQMEVIQDGGTGRKIHKSSLDRLNVLRRNISTVLRFSNAVPFNWNTKGFRCFYCCKQTQDCYQLINHTGKHTPSDIDQFIAKNIITKDVPVKIDISKLKCKVCSIPLAKLDDLIPHIIESHKEEYDHSVGVCFFPFVLNKEVMQCVICQNSYDNFASMTSHMYKEHINHTFICQICGLSFKDQVRLKRHITYSHVGFKCTVCKKTFAVLNKLNIHKQRFHGQVKLHDCNLCSEKFLNSYQVKVHMGTVHNVEKYKIKCEHCPKVCTTKGAMLIHMQGRHTKIRYQCDLCDYSTGIKWQIKLHKRKHFGVKEYTCSICERQFGRSSNLRAHMKVHTGEPRGGQKIVAAKPKAETLPKTKPKTGTIVTKPKAGTVLASKLKASKLKSTTLNTKSPSVKEIIDKDLAPPVNILQKKGPKRLSAREKRNLMIRNVTQVLLKTTVMPFRWLKSSYRCFYCYDIFQEASELKEHQSVHKGQDFIEKAMNNYWEPVVYLDISEMRCKLCPEDITDLYEMIDHLVTKHDVVFNKDIGMCMVAFKLDNLNIFCLSCGAAFFTFGPLLCHTNKAHKGTNVLLCEVCGQHFKHANLLRLHVKTVHEKASFPCTDCDEKFLTPAKLKTHQKSQHFVVKRYKCLVCTETFQSHYKRSRHMATEHENRKVIKCLQCPKTFIFRSMMMTHLRDTHLKVRNHMCSVCGWRAFNSNRLKNHMFKHSGEKNFKCEVCDKAFSTRKIMMAHFSRMHRAPQQPVVAYANAYGPQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -