Ecre044139.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ectropis crepuscularia
Gene Symbol
CUL1
Assembly
GCA_963693475.1
Location
OY856366.1:573622-591533[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.5e-07 0.00017 22.8 0.0 3 42 17 57 15 60 0.87

Sequence Information

Coding Sequence
ATGCCCAGAAACTATGTAAAAAAGAAGGAACCGCCCCGGTATACTGTAGAAGATATTAGAAGAGCAGTGGAAGATGTCACAGAAAAACGGAAGACATTTAGGCAAGCTAGCGAATACTATGGAATACCCACTGCTGTTATTTATCACCGTATTAAAGGCCGAAAAGTGTCTCTAGACAGAATGGGTGGAGGAGTCTCCAAAGTATTACCGGATCGTGCGGAACAACATCTCGTTAATTGCCTGAAAACAAGAGCGAGAATGAATCACCCGTGCCATAAAGAAGAATTTTTGATGTTGGTGGGAGAATATGTGAAAGCACAGCAAATAAAAACGCCCTTTAAGGATAACATTCCTGGAGACTGTTGGTACCAATCCTTCATGAAAAGAAACCCTAGTCTTTCACTAAAAAAGCCTGAAATTTTACAAAAGGCCCGCACTGATGCAAGGAGACCTCACGTTGTTTACGATTTTTACGATATGTTATCAAAAGAAGTAACCGAAAACAATCTCAAAGACAAGCCAAGGTATATTTTTAACGCCGATGAGAGTGGTTTTCATAGCGATCCCAGCAAACTTCGAGCAATAGGGGAAAAAGGAACAGCTCTCTCCCGCGTAACTGGCGGCTCAGGTCGAGAATCGACTAGCGTCTTAGCATGTGTAGCTGCAGATGGTACATTTTTGCCCCCTTGTATAGTATTTAAAGGAGTCGCTGTACAGGCAAGATGGGTTTCTGATAAGGCTTATCCTGGAACATTATTCGGAGCGACAAAAAACGGCTGGATGGAGGAACCTACTTTCCATAATTGGCTCATAAACGGATTTATACCTTATGTAGATAACATCCGGAAAGTAAATAACGAACCCAATCACAAGGTTATTCTGATTTATGATGGCCATTCTAGCCACATTAGCGTGAGAATCGTAGAAGATGCTATAAATGCAAATATAATTCTAGTCAAGTTTCCTAGCCATTTGACAGACCGCATCCAGCCTCTGGATAAATGTGTATTTGGACCAGTGAAACGTCATTGGGAAAAAACATTAGTAGAGCACGGCATAAAACAAATGGGAAAAGGTACTGGCCATCTGTCCAAAGAAAAATTCACGGAACTCCTAGGGGAGGTATGGGCACAGGCCTTTACTACCAAGAACATTGTGTCTGGATTCAACACAACAGGTATTTTTCCAGTAGATGCTACAAAATtctccaaaaaaatattcaatccTATCGAACTACAAATATACCACAACCTGATAAATGCACTAAACGAAAAAGATACAGATTTTGATGCCAATTGTGACAATAGTATGTCTACAGAAGAATCACCAAATTTTCCAGGTGAATTTGTTCCAACATATAATGGTTCTACATCAACAGTATGCACCGACCAAAGAGACGAACCTGCACCAGAGGATAACCTTACTTCAGACTTACTAAATACTATAGATAATAATTCTTCAACACAGGGTTGTATTGAGGAACATGCTAATCCTGACTGCTCTGGTTTTGAAATCTGTTCTACTAGTAATACAATCAACATGGCAAGAACAACTAGTATTCCACATTGCTCAAATTTTGATGACCACACATTGACTGTTCAAGATAATGTTATTCCTAGTTGCTCGGTCTTTCAACAGCCCACCACTAGTATTCATGCTGACTTTGACTGTGAACAACCTTTGGAGGATATAACTGCTGAATCAGCAATACCGGATTGTAGTACTTTTGAAGGCCATGCTATGAATGATTCCGTCGTATTAACCAACAGTGAAAATTCATCTCCattggtaaataaaatattaaaattgatatcACTGGATACAACCGCAAATGACGCTATTAAAGCAAAAATTCTAAAAGCTATATCATCTACTAATGGTGATGATGACAAATCTGATGATATTATGTCGCCAAATAAAGAAACTCTAGAGAAGTTgtttaaattacagaaaaatagccctgaaaagaaaaggaaaatagtagTACCAAGGCTAAAGGTAGCGACATATGGAGAAGTTCTCACTACAGACGCCGTTAAAGAAAGATTAAAACAAGCGGAGGAAGCCAAGTATGGTAAAGGACTTAAGAAAAGAGTTAAGACAGAGAAGAACCCAAAGAATAAGGGTCAAGGAAAACGAACAAAAAGTGAGAACTTTAATAAAGAAGATGACAAGGAGAATAGTGATAGTAAGAAAGCCAAGCTTGCCGAATCTAACAGTAATCAGAaagaaaaagttgaaaaaaCTAGTAAGGATAAGCCAATTCCACTTGTCAGTATGCGCCAAAGAAATAAAGTATACGACAGTGACGTAGAAGAGTCTGAGGAAGAAGAAATAACAGTACCTTATGCAGAAAGTGAAGACAGTGATTACAACGCTGCATGCGAAACTGTAATTGAGGACTGTGAATTTCTTGAAACGACATCAGTAACTGACAAATTAACAAAaggaaattttgttttgATATGGGGCGACCTCCAGGACGGGATCGAGCAGGTGTACCAGAGACAGCACATGCCCAAGAAGAGATATATGGATCTCTACACTCACGTGTACAACTACTGCACGTCTGTGCACCACCAGGgagcggccggcgcggcgcgggtcAGCATCAAGCCGAGCTACGGCGGCAAGAAACAGAGTGGGACCGTGCAGGGTGGGGCCCAACTAGTGGGGCTTGAGCTGTACAAGCGGCTGAAAGACTTCCTGCGGCTCTACCTCATCAACCTGCTGCAGAACGGCGCTGAACTGATGGGCGAGGACGTGCTAGCATTCTACACGGTGCAGTGGGAGGAGTACCAGTTCTCCTCGCGCGTGCTCAACGGGGTCTGCTCCTATCTCAACCGGCACTGGGTGAAGCGGGAGTGCGAGGAGGGACGCAAGGGTATCTACGAGATCTACCAGCTGGCGCTGGTGACGTGGCGCGACAACCTGTTCCAGAGACTCAACAAGCAGGTCACCAACGCGGTGCTGAAGCTGATCGAGCGGGAGCGCTCCGGCGAGACCATCAACACCAGGCTCGTGTCCGGGGTGATTAATTGCTACGTGGCCCTTGGTCTGAACGAGGAGGAACCCAGCGCTCGCGGACAGAACCTGGCCATCTACAAGGAAACCTTCGAGGCCGTGTTCCTGGATGACACGGAGCGGTTCTACACGAGGGAGTCCACAGACTTCCTGAGGAACAACCCCGTCACCGAGTACATGATCAAGGCTGAACAGCGACTGCAGGAAGAACAGCGCCGCGTGCAGGTGTACCTCCATGAGACCACCACGGAGCGGCTCGCCAAGACCTGCGACCGCGTGCTCATCGAGAAACACCTCGAGATCTTCCACCACGAGTTCCAGAAACTGTTAGACGGCGACAAGAACAGCGACCTGGGGCGCATGTACGCGCTGGTGGCGCGCATCCCGGACGGGCTGGGGGAGCTGCGCCGCCTGCTGGAGGCGCACATACACGCCCAGGGGCTCGCGCACATCGACAAGTGCGGCCTGCACGCGCACACGGACCCGAAGGTGTACGTGTCGACGATCCTCGAGGTGCACAAGAAGTACAACGCGCTGGTGCTGGTCGCGTTCAACAACGACTCCGGGTTCGTGGCGGCGCTCGACAAGGCGTGCGGACGGTTCATCAACAGTCAGTATACTCtgcttttaaaacttttttga
Protein Sequence
MPRNYVKKKEPPRYTVEDIRRAVEDVTEKRKTFRQASEYYGIPTAVIYHRIKGRKVSLDRMGGGVSKVLPDRAEQHLVNCLKTRARMNHPCHKEEFLMLVGEYVKAQQIKTPFKDNIPGDCWYQSFMKRNPSLSLKKPEILQKARTDARRPHVVYDFYDMLSKEVTENNLKDKPRYIFNADESGFHSDPSKLRAIGEKGTALSRVTGGSGRESTSVLACVAADGTFLPPCIVFKGVAVQARWVSDKAYPGTLFGATKNGWMEEPTFHNWLINGFIPYVDNIRKVNNEPNHKVILIYDGHSSHISVRIVEDAINANIILVKFPSHLTDRIQPLDKCVFGPVKRHWEKTLVEHGIKQMGKGTGHLSKEKFTELLGEVWAQAFTTKNIVSGFNTTGIFPVDATKFSKKIFNPIELQIYHNLINALNEKDTDFDANCDNSMSTEESPNFPGEFVPTYNGSTSTVCTDQRDEPAPEDNLTSDLLNTIDNNSSTQGCIEEHANPDCSGFEICSTSNTINMARTTSIPHCSNFDDHTLTVQDNVIPSCSVFQQPTTSIHADFDCEQPLEDITAESAIPDCSTFEGHAMNDSVVLTNSENSSPLVNKILKLISLDTTANDAIKAKILKAISSTNGDDDKSDDIMSPNKETLEKLFKLQKNSPEKKRKIVVPRLKVATYGEVLTTDAVKERLKQAEEAKYGKGLKKRVKTEKNPKNKGQGKRTKSENFNKEDDKENSDSKKAKLAESNSNQKEKVEKTSKDKPIPLVSMRQRNKVYDSDVEESEEEEITVPYAESEDSDYNAACETVIEDCEFLETTSVTDKLTKGNFVLIWGDLQDGIEQVYQRQHMPKKRYMDLYTHVYNYCTSVHHQGAAGAARVSIKPSYGGKKQSGTVQGGAQLVGLELYKRLKDFLRLYLINLLQNGAELMGEDVLAFYTVQWEEYQFSSRVLNGVCSYLNRHWVKRECEEGRKGIYEIYQLALVTWRDNLFQRLNKQVTNAVLKLIERERSGETINTRLVSGVINCYVALGLNEEEPSARGQNLAIYKETFEAVFLDDTERFYTRESTDFLRNNPVTEYMIKAEQRLQEEQRRVQVYLHETTTERLAKTCDRVLIEKHLEIFHHEFQKLLDGDKNSDLGRMYALVARIPDGLGELRRLLEAHIHAQGLAHIDKCGLHAHTDPKVYVSTILEVHKKYNALVLVAFNNDSGFVAALDKACGRFINSQYTLLLKLF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-