Basic Information

Insect: Ectropis crepuscularia
Gene Symbol: -
Assembly: GCA_963693475.1
Location: OY856360.1:6364219-6377304[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.1e-07 7.9e-05 23.8 0.0 1 39 18 57 18 62 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.1e-07	7.9e-05	23.8	0.0	1	39	18	57	18	62	0.90

Sequence Information

Coding Sequence: atgCCTCGCAAGTACGTGCGCAAAGTAGGGGCAAGCCCTCGGGGCGAATGGACGGAAGATGCCCTAAGAAAAGCTTTAGAAGAAATGAGGGAGAATAAGCACGGCTTGAATGAAATATCTCGTCGTTATGGAATTCCTGCTAGGACCCTGAAAAGACGTTTCGTGAAACAAGATACTAAGAAACTTACTTTAGGGAAACACCCCGCTCTAGACTTCGAAAACGAAAAACGGCTCGTCGCACACATCCTGAAACTAGAAGCAGCTGGGTTTCCTGTGTCACGAGATACGGTACAAAGTTTAGCGTTTCAATTCGCTGAAAAGCTTGGGATCCGACATACATTTAATAAGGAGACAGGTAAAGCTGGACCTCATTGGCTTAAGTCCTTTTTAGAACGCCAACCTACGCTTAGCGTTCGGCTACGAATGACCAAAAACGCCAATGAACGAAAGGCAATTCATTCTTCTGAGTCGGACTCTCATGAAAATTCGTCAAATGAATGTCtggaatgttttgaaaattatgaGGAAACAAAATCAACGGCAGACTGGATCCAGGGCGTCATGTGTAAAAAaATAAAGAGACGCAAAGTTGCAGCAGAGCTTGGCCAACATGGTGCGTCTGCGGAGCCAATAGATGCAGACCAAAGCATTCTTCAAGGAGGTCCGTCAACCAACAGCAATGGAACAGATAATACCGGTGAAGCGGAATCCGACAAGACAACTTTGGACCCTGTCCTCGAGTTAGAAGCGTTCCCGCAACTACTGAAATCTTCTGAAATCATCGATACATTCGGACATGGATATGGAATTAAGATTTCCGAAGTAACCACAGTTCCAGAACTTAGCACAGAGTTACATGATGAACCCAAACGGATCAATGAAACTTTAGAAATATCATTCGAACCAGAACCCACAACAAAACCAGTCAAACCAAAAACAATCAAACCAAAAGCAATGCCAGTCAAGAGAAATCCGCTACGAGGCGTTATTATCAAGAATGAAATAAAGAAACAAATCGCGGCTCAATATACTCCCCGTGTTAAAAAACAAGTTAACCCAAACTGTATAGAAAATGACGACCCCATGAATGGTGAAAATAATCAAGTATCGAAGAAAACAACAGACAAGGAATCACATTTTAATCATATGGAAAACTTATACGAGTTTGGGAAATACGTGGTAGAAGAGATGATGTGTCTCgataataaatatgtcaatttagcacaaatacaaataaagaaaattcTGGCTAAATACAAATTACTATACCAAACaatgcaaaataaaacaaacggaaaATCTACTAAAGAAGAGACCGTCTTAGACAGTAGTTTAAAGACTGCAGATAAATTAACTGTACAAAGACCACAATATAAATCTACTGGGGAACCAAAGGACAATAACCTAAAGAAATTAGATGCAGCGAGAAAAAATACAACATCGACATCGTATTCAGTACCGACAGGCCCGAACAAAAGTTCAGTACCGACAAATCCGAAAGCAAGTTCTGTATCCGCGAATCCAAAAGAGAGTTCTCAGTTACAAACGAATTATTTAACACGAGTGAGCCATAGCGACCCTGTAGTGTATCCAGAAGTAGAGTTACAGTCAGCTATTGATTCACTAAATTCTTACACTCCCACTGAGGCACACTCTTCATATTTGCTAGAAACATCAGCTGTTAAAACAGAGCAGACATTATTATTACCTGTCACATCACAAATGTCATCTCAAGTAAACCCTTCAACGTCAATACCGCAACCAAATACGATAAAATTCATCTCAACGGGTACATCAGAGCTTACACCTTCGAATTCTGAACCTCCCGTGAACCAAGAAATGTCTGAAGAAAAATTTGATCCTACCGACCCATTGTTTTCACATGTGACTATAGTAGAGGGCCCAAGAGTGATCCCAATCGTGAATGAACCAGAGTCATTAGTTATTAAGTATGAAGATATGAGTGACAGTGAAACGTGA
Protein Sequence: MPRKYVRKVGASPRGEWTEDALRKALEEMRENKHGLNEISRRYGIPARTLKRRFVKQDTKKLTLGKHPALDFENEKRLVAHILKLEAAGFPVSRDTVQSLAFQFAEKLGIRHTFNKETGKAGPHWLKSFLERQPTLSVRLRMTKNANERKAIHSSESDSHENSSNECLECFENYEETKSTADWIQGVMCKKIKRRKVAAELGQHGASAEPIDADQSILQGGPSTNSNGTDNTGEAESDKTTLDPVLELEAFPQLLKSSEIIDTFGHGYGIKISEVTTVPELSTELHDEPKRINETLEISFEPEPTTKPVKPKTIKPKAMPVKRNPLRGVIIKNEIKKQIAAQYTPRVKKQVNPNCIENDDPMNGENNQVSKKTTDKESHFNHMENLYEFGKYVVEEMMCLDNKYVNLAQIQIKKILAKYKLLYQTMQNKTNGKSTKEETVLDSSLKTADKLTVQRPQYKSTGEPKDNNLKKLDAARKNTTSTSYSVPTGPNKSSVPTNPKASSVSANPKESSQLQTNYLTRVSHSDPVVYPEVELQSAIDSLNSYTPTEAHSSYLLETSAVKTEQTLLLPVTSQMSSQVNPSTSIPQPNTIKFISTGTSELTPSNSEPPVNQEMSEEKFDPTDPLFSHVTIVEGPRVIPIVNEPESLVIKYEDMSDSET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -