Basic Information

Insect: Ectropis crepuscularia
Gene Symbol: clz9
Assembly: GCA_963693475.1
Location: OY856340.1:2774097-2776469[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 7.7e-08 2e-05 25.7 0.1 3 38 16 52 14 59 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	7.7e-08	2e-05	25.7	0.1	3	38	16	52	14	59	0.84

Sequence Information

Coding Sequence: atggtGCGgaactataaaagaaaaaaagaaaaaaaatattctcaagCCCAGCTTGATGAAGCTGTTGAATTCGTTAGAAAAAAGCAAATGAACAGCTACGCAGCTGCTGTTAAGTACGACATTCCAAGATCCACTATCATATCTCGACTATATGGTACCCGAGGAGCGAAAATGCCTAAAGCTGGAAGACCTGCAGTGTTTTCTATAGGAGTGGAGACAAAAATTGCATCATATATACACATCCTGGAGAAATGTGGATATCCCTTAacgaaaaaagaaataatagcTATGATTTCTGAATATATTCGTCGAAACGGCATTATAACTACATTTGTAAATGATGTGCCTGGAAAAGAGTGGTTTTTGGGATTCCGTAAACGACATAAACTGTCATATAAAAAACCACAATCTGTAGAAATAGCACGAAAACGGGCATGCAACCCTTTCATAGTAAATGAGTATTTTGACTTGCTAGAAAAAGTTACTGAAGAATTAGAACTTACAGATAAGCCCGATCAAATTTTCAATCTAGATGAAACAAGTTTTTGTTCGGATCCTTCAAAAGGCAAAATTGTAGGTTTAACTGGATACCAATCGACTAGAACGACAAGCGGCCCAGGTCGAGAAAATACAACTGTTTTACTTGCTGCCAGTGCTAGTGGTGCAAAACTACCACCATTAGTTATATTTCAAGGAAAATATCTCTGGAATGAGTGGATGTACAAAAATGAAAACGTGAATACTGCATATGCAGTTAGCCAGAAAGGATGGATGGAGACTACTATATTCGAGAAATATCTAAGAGACGTTTTTATACCCACCATCGGATCTAAAAGACCCGTGTTACTGATATATGATGGACATTCTACTCATGTAGATTTGAGTGTAGTGGAACTAGCAGCATCtgaaaaaatcacaattttaaaattaccacCTCATTCGTCTCACGTGCTGCAACCTTTAGATTGCAGCACGATGAAGCCATTAAAAGATAAATGGGAAGATTCCCTAGTAAAGTGGCAACGGCTGCACGTAGGAATGAAATTGCCAAAAGCAGAGTTTGCCCGCCTAATAACGGAAATTTGGGATGCATTGAATCCCGTTATATTGCAAAATGGATTCCGTAAAACAGGAATTTTTCCTTTAAACCGACAAGTTATCGGAGATGAAAAATTTGACGCCTTGTCTTTGCAAAAATGGAAGGAACATATCGAACAGATCGCtgttaatcaaaatgaaaaaattcTCAATGACGATACTGAAACCGTTGTGGCTAGTAATATCAACACCAAATTTGACCAGTTTATTCACGATGCACCTTATCAAGAAATACCAAGTCTTTTGAGTTTGGTTATTGCCAAGATAAACTCAAATATTGAACCAGAGATAAAAGACTTCATTGAACAGGCTATGTTTAGGTCAAACAATGAAAACAAAGGTTACTTATTGCCATTGCCTAACAAATACCCGGTAACTTGGGCACcttcattaaaaatattgtccAATGAAGTCATCCATCCAGCAAAAGCATCTAGTTCCCATAAAGAACTGAATCTTAAAGAATATGAGCCAAACATATCATTTGAACAATTAATATTGCAGTCAATAGCACGTAATGACATACCCAAGAAAACTAAGAAGCGCATAAATACAAAGGGAGCAGAAGTGTTAACATACAAATCTACAATAGATCGTATGAAAAGTGAGTTGCAAGTAAGAAAAGAGAAGAAAACCAAGAAAAAAAAGACAACCGCAACATCTAATCAGCACGTAGTAAAGAAATCTAAACTGAAACAAAACAAGGGAAAAAAGAGACCACAAAAGCATGCAACTGGAAAGCGCAGAACTAAACGTATAAGTGAATCAAGCTCAATATCTTCAAACCCTTCTTTTGAATTAGCTGACTCAGACAATTCCAATTTCGATACATTGCACGATTACGTAACTGAATGTTtaagagaagaagaagaagaagctgAGGTGGAATGCTTACGCCAAGTAttagaagacaaagaaaatgTGGCACCAGCAATGCCGTATGGTTTGCATGAAATTGAgtattttgttgaaaaaaataacaacattaaAACAAATGACTGGATTGTGGTCCAATTCTCTACCAAAAAGAGTGTAAAACACTTTGTTGGCAAAGTTTTATCCCAAGACGATTACAAATGCCCTACAGTAACATTCGTCAGAAAAGTGAAAAATTCGAAATATGAAAAGGGCATGGTATTTACTTATCCAACCATAGAAGACGTTTGTGTCATTAAACATATAGATGACATCGTCTCCGTGTTGCCCGAGCCAAAGATTGCTCGACGTGGACAATTAATATTTGATGTCAATTTTAGCGctttcaatattcaataa
Protein Sequence: MVRNYKRKKEKKYSQAQLDEAVEFVRKKQMNSYAAAVKYDIPRSTIISRLYGTRGAKMPKAGRPAVFSIGVETKIASYIHILEKCGYPLTKKEIIAMISEYIRRNGIITTFVNDVPGKEWFLGFRKRHKLSYKKPQSVEIARKRACNPFIVNEYFDLLEKVTEELELTDKPDQIFNLDETSFCSDPSKGKIVGLTGYQSTRTTSGPGRENTTVLLAASASGAKLPPLVIFQGKYLWNEWMYKNENVNTAYAVSQKGWMETTIFEKYLRDVFIPTIGSKRPVLLIYDGHSTHVDLSVVELAASEKITILKLPPHSSHVLQPLDCSTMKPLKDKWEDSLVKWQRLHVGMKLPKAEFARLITEIWDALNPVILQNGFRKTGIFPLNRQVIGDEKFDALSLQKWKEHIEQIAVNQNEKILNDDTETVVASNINTKFDQFIHDAPYQEIPSLLSLVIAKINSNIEPEIKDFIEQAMFRSNNENKGYLLPLPNKYPVTWAPSLKILSNEVIHPAKASSSHKELNLKEYEPNISFEQLILQSIARNDIPKKTKKRINTKGAEVLTYKSTIDRMKSELQVRKEKKTKKKKTTATSNQHVVKKSKLKQNKGKKRPQKHATGKRRTKRISESSSISSNPSFELADSDNSNFDTLHDYVTECLREEEEEAEVECLRQVLEDKENVAPAMPYGLHEIEYFVEKNNNIKTNDWIVVQFSTKKSVKHFVGKVLSQDDYKCPTVTFVRKVKNSKYEKGMVFTYPTIEDVCVIKHIDDIVSVLPEPKIARRGQLIFDVNFSAFNIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00634349; iTF_00634351; iTF_00634352; iTF_00634353; iTF_00634354; iTF_00634355; iTF_00634356; iTF_00634357; iTF_00634358; iTF_00634359; iTF_00634360; iTF_00634361; iTF_00634362;
90% Identity: iTF_00634349; iTF_00634351; iTF_00634352; iTF_00634353; iTF_00634354; iTF_00634355; iTF_00634356; iTF_00634357; iTF_00634358; iTF_00634359; iTF_00634360; iTF_00634361; iTF_00634362;
80% Identity: iTF_00634351; iTF_00634352; iTF_00634353; iTF_00634354; iTF_00634355; iTF_00634356; iTF_00634357; iTF_00634358; iTF_00634359; iTF_00634360; iTF_00634361; iTF_00634362;