Ecre008313.1
Basic Information
- Insect
- Ectropis crepuscularia
- Gene Symbol
- -
- Assembly
- GCA_963693475.1
- Location
- OY856341.1:28540494-28542119[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-08 8.5e-06 26.9 0.0 2 37 14 49 13 55 0.90 2 2 9.4 2.4e+03 -0.2 0.0 22 30 140 148 126 149 0.75
Sequence Information
- Coding Sequence
- ATGTCCCGACAAAGAACGACATTAAGAGCTTCTTGGACTGCAGAAGACCTTGAAGAGGCCAGAGAAAAAGTAAAGAACCAAGAGTTAGGGGTCAATGAAGCTTCCAGAGTCTACGGAATTCCGTCGCGAACCCTTCGGCGGTATATCATATCGGGACGATCAAAAGGTCCTCTTGGTCGAACTCCAGTATTTTCTACTGAGCATGAAAAGAAGCTGGTTGCTCATATAAAAAGATTAGAAAAAGTTGGGTTTGCCCCTGACAGAAAAGATGTCAAAGAAATGGCATTTCAACTGGCCCAAAAACTAAATTTGAACACTCCATTTTCTAAAAATTCGGAATGTGCTGGAAATGTCTGGTTTACCGGATTCATGAAACGCAATCGTGAGTTGAGTCAGAGAAAGTCGGAAGGTCTATCACTTGCTCGGGCTTATGGAGTGAATCGTGAAGACGTCAAGGACTTTTTCGATTTACTTGCCAAAATATACGAAGATAACGATTTTGCCAATCATCCAGAAGACATTTACAATATGGATGAGTCTGGCATCCAAGTAAACAACAAACCAGGAAAAGTAGTTGCCACAAAGGGAGCTAAAGACGTTTACACATTGACAAGTTGTGAAAAGGGTGAAAATGTAACAGTGATCGCTTGCTGTAACGCCCAAGGGAACTTTATCCCTCCTGTTCTAATATACAAGGGGACCTACAGCAAACCGCAATTTTCTGAAGGACTTCCACCAGGATCCCAGGTCTTTATGAACAAGAAGTCTTCATACATCAACTCGGATCTTTTTATGAAGTGGTTTGAAGAGGTTTTCTTACGCCACAAGAGCTCTCGAAAGACCCTGTTGGTGTTGGATGGCCACAGCTCACATAGTAATAACATACAACTATTGGAAGTTGCAAAAGAAAACAACGTAATCTTATTGTGTCTACCTAGTCACACAACTCATGCACTACAGCCACTGGACAGAGCGTTTTTTAATCCTCTGAAGGTGTATTTTTCGCAAGAAGCCAAAGCATGGATGGTAAGGAATAAAGACAAGAAACTGACACGCTATGACGTCTCAAAATTGATTGGTGCGGCTTGGGGTAAAGCAGCTACTATATCTAATGGTGTGTCAGCTCTAAAAACATGTGGAATTTATCCTTTTAACCCCAATGCCATTCCCGATCATTATTTTTCAATGTCAGATTCTTTACGGGAACAAAATTTGGTTGAAAATGTTGCAAATGACGAAGACGACACTTCAAGGGAGTCTATTACGTTGCTTCAAGAACCATTAACAACAATGAATATGTTCATAGAATCACAGCAGCAGTTTGAACTTCATTGTGAAGAACAAAGCAGAAACGTTTTGGTGACTACTGCTACAATTCCGTCATCTCCGAATGAACCACTAAGTAGTGGTGACCATATCAGTTTAGTAACAACTGCAACAGTACATTCCCCGCCTCGTCAGCACTTTCAACAAGTCGAAGCTTGTTCTGGTGGACCAGCCGTTAACTCATCAGGAGAAGTCATAGATACGTCAATAGAGAGTGCAACTTTTCATCCAAAACCACCTCAAAAAGACATAGAACAATTACAAAAACGCGATGACTCCTtatctaaagaaaaaaaataa
- Protein Sequence
- MSRQRTTLRASWTAEDLEEAREKVKNQELGVNEASRVYGIPSRTLRRYIISGRSKGPLGRTPVFSTEHEKKLVAHIKRLEKVGFAPDRKDVKEMAFQLAQKLNLNTPFSKNSECAGNVWFTGFMKRNRELSQRKSEGLSLARAYGVNREDVKDFFDLLAKIYEDNDFANHPEDIYNMDESGIQVNNKPGKVVATKGAKDVYTLTSCEKGENVTVIACCNAQGNFIPPVLIYKGTYSKPQFSEGLPPGSQVFMNKKSSYINSDLFMKWFEEVFLRHKSSRKTLLVLDGHSSHSNNIQLLEVAKENNVILLCLPSHTTHALQPLDRAFFNPLKVYFSQEAKAWMVRNKDKKLTRYDVSKLIGAAWGKAATISNGVSALKTCGIYPFNPNAIPDHYFSMSDSLREQNLVENVANDEDDTSRESITLLQEPLTTMNMFIESQQQFELHCEEQSRNVLVTTATIPSSPNEPLSSGDHISLVTTATVHSPPRQHFQQVEACSGGPAVNSSGEVIDTSIESATFHPKPPQKDIEQLQKRDDSLSKEKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00634335; iTF_00634337;
- 90% Identity
- iTF_00634335; iTF_00634337;
- 80% Identity
- -