Ecre034539.1
Basic Information
- Insect
- Ectropis crepuscularia
- Gene Symbol
- clz9
- Assembly
- GCA_963693475.1
- Location
- OY856358.1:12763596-12773864[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.6e-10 9.2e-08 33.2 0.1 3 44 17 59 15 60 0.94
Sequence Information
- Coding Sequence
- ATGCCGCGAAAATATACAAGAAAATCTGATAGAAGCAGATATGATAGTGATAAATTAAGTGAGGCTGTCAATGCAGTAAAAAATGGAACAATATCTGCATACGCCGCATCAAAACTTTATAATATACCAAGAACAACAATTGTTAACCGTGTATACGACCGCAAAGGTTCAAAATCCAAAACTTTAGGCAGGTGTACTGCATTGCCCACGAATGTGGAAGAAACGCTTGCGGAAAATCTCCACGTAATGGAAAAGTCGGGGTTTGGGTTAACGCGCAAGGAAGTGATTCAATTGGTAGGCCAATACGTGGCTGAGAATAATATTAAAACTCTGTTTAAAGATGGGATCCCTGGAGAGGACTGGTTCATTGCTTTTAAAAACAGACACGGCCTTTCTGTTAAAAAACCCCAGGCCGTTGAACACGCGCGTAAAACTGCATGCAGACCTGCCGTGATCTACGGTTACTTTGATTTATTAGAGAAAACCATTAATGAACTGGGCTTATGTGATAAACCATCACATATTTGGAATCTCGACGAAACCAGCTTCAGTAAGGACCCGAGTAAATCAAATGTTGTTGGTCGTCGAGGCTATACGTCTACAAGAACCATCGCCTCTCCAGGGAAATCGAATACAACTGTGCTTTTAGCATGCAATGCCGCTGGTGAAAAAGCTCCGCCGCTAATCATATACACAGGAAAAAATATCTGGAACGAATGGGTTTCTAAAGATGGATTTCCTGGAACCGTTTATGCTGCGACTGAAAAAGGTTGGATGGAGGCGACAGTATTCGAAAACTTTTTCGAAAAAGTTTTTTtgccaaccgttgaaaataaacgTCCTATTCTCTTGCTTTATGATGGACATTCTACTCATGTGGGAATGAATATTATACAAAAGGCACGAGAAAACAACATAACGATTTTAAAAATCCCACCACATACGAGTCACCTACTGCAGCCTCTGGATCTAGCGGTAAATAAATCGTTCAAAGATAAATGGGACATAGCGTTAGTCAAATGGCAAAGATTGAATGTCGGTAAGGTTTTACCCAAAAAAGAGTTTTCAACGATTCTTGGCCAAGTGTGGACTCAGATAGATGCCCAAGTATGTCAAGCAGGCTTCCGTAAAGCAGGgatatacccaataaataaaaatgtcatagctgaAGAGAAGTTTGATCCAGTTCAGTTAGCAGAATGGAGGAATGCGAAACAGCTAGAAAAATCACAAAATCAGCTTGTTAAACAAATATCCCCCAAAAAGTTGAGTGAAATCGCACTGACTGTTGTAaatgaaatatatataatacagcAGGCAGTTCCTCAGTGTAATTCAATAGAAGCGTCACCAAAGTACGTTTTGCACAGCGAAGAAAAAGCTGTTCCATTGCTAAATATTGAGAATGTTCAACAGCGTCCTAAAGTCCAAATTCTTGACAATCAGCGTGTATATACCAATATCACATTTGAAGAGTTGCTTCTGAAAATGATTAAACCTGGAAAACCATCTTTGACAaccaaaagaacaaaaatagcgACAGGCGCAGAGGTCATCACTCATGATCATGTGTACGAAAGATATCAAAAAAtggaagaagaaaaaaaagaaaagttgaaaaagcaagaagaaaaaaaagcaagtaaagaaaaaaagaaacaaacggAAAAAAGAGCGAGCACAAATAATAAGACAGGAGCAAAAAAAAAGAACGGGGAGGAAAGGTGTGAGATCGAGGGTAATTATAAGCAGACTGATATACAGATTTCTGGAGTGGATATGTCATTACCAGGTCCATCAGGTCTTAACAAAAAGAGGAAAATTAAAAGTGAGTCAAAAAGGAGTAAAACCAtaaattctacaaaaaaaatagttcgacaaaataaaaaactcagAAAAATATCATCATCCTCATCTACCAGTATATCTGATTGCATGAGCGTGTATGAGGATTCTGATATTATAGACGTGACTGATGAAGAATATGATATAACAAGAGATTTATACACCAACGAATTTATACAAAATTATGAACCCTGTAATGAACAAGAGAATAAAATCTATAGCATAGATAAGAAAAGCAATGTGGTGAAGAAAGTTGGTGAGAATTTGGACAAGCAATGCAAGGAGACAGTGAATTTTACTGAGGAATCAGATGAAACTAATATGGTAGCAGAGGAATTTAACGGTGAATGGGATGGACTTTCAAAAGTGGAAAAGGAAGAGTATTGTGCATTTAATGACCAAGCAGTTACTGAGGGGAACAAGGTGATACATGAAGTCAGTGGAATATCGGATGAGAGAAATGATGTGGTGGAAAAAGTTTGTGATAGTTCAGATGAGAGATATCAGGTGGCAAAGGAAGTTGGTGAGAGATCGCATCAAAGGAACAACAATACAATGGCTAAAGAAGGCAATGACAAATGGGATGTAAAGAAAAATATAGAAGAGGAAgagaattataaaataaatgacaatgttttgaTTCGTTACTTTATCAGGAAAAGTGTCGTTCAGTTCGCGGAGAGTGAGGGTGGCACTGTGGCTGTGGTCATCAATAAATGGATAACACCTAAAAAAAGAGAAATCTATTGGCCTCCCGTAAAGGAGGCGAAAGCATTTGATAAACTTCTACAGAGGTGTTCGTCTCCAAATGAACAATGGAAACTATACGAGATCGATAgagttttctatcagactgATTGTCAAGGCCAAGTTGTTTCACTACTTGCCAAAATAAAAGCCCAAAATGATGTCATCCTAGCAATTTTGAAAGACAGAGCAGGAAATACCAATGCATTGAAGCCTGAATTCAAATTTCCCTTGGAAACTTTTCAAGATTTAGAAACAGTGGAACAGTTACTGACTAATACAGAAAACTGTGCTAACCTGACAAGCTACCTAAAGAGCCTTGGTGggcatgatttaaaaaataaagtatcgaGAGTGATGAAATATACATTGTCAGACTCGTTGGCAAGCAAGTTCAACTTCTATGGTAAAAGGTCTGAGAAGAAGCCTTTTTCAGAGCTACGTCTCCGTGAATTTATTGTTGaGAGCTTAAAGAGTTCCTCTCCAAGGATTACAGAAAAAGACATTGAAGACGATATAAAGGTGTGGCTCAAGCACGCACCTGAACGAGCAAAAAAGCGATTgtcaaaggaaaataacaatgtcatcctctag
- Protein Sequence
- MPRKYTRKSDRSRYDSDKLSEAVNAVKNGTISAYAASKLYNIPRTTIVNRVYDRKGSKSKTLGRCTALPTNVEETLAENLHVMEKSGFGLTRKEVIQLVGQYVAENNIKTLFKDGIPGEDWFIAFKNRHGLSVKKPQAVEHARKTACRPAVIYGYFDLLEKTINELGLCDKPSHIWNLDETSFSKDPSKSNVVGRRGYTSTRTIASPGKSNTTVLLACNAAGEKAPPLIIYTGKNIWNEWVSKDGFPGTVYAATEKGWMEATVFENFFEKVFLPTVENKRPILLLYDGHSTHVGMNIIQKARENNITILKIPPHTSHLLQPLDLAVNKSFKDKWDIALVKWQRLNVGKVLPKKEFSTILGQVWTQIDAQVCQAGFRKAGIYPINKNVIAEEKFDPVQLAEWRNAKQLEKSQNQLVKQISPKKLSEIALTVVNEIYIIQQAVPQCNSIEASPKYVLHSEEKAVPLLNIENVQQRPKVQILDNQRVYTNITFEELLLKMIKPGKPSLTTKRTKIATGAEVITHDHVYERYQKMEEEKKEKLKKQEEKKASKEKKKQTEKRASTNNKTGAKKKNGEERCEIEGNYKQTDIQISGVDMSLPGPSGLNKKRKIKSESKRSKTINSTKKIVRQNKKLRKISSSSSTSISDCMSVYEDSDIIDVTDEEYDITRDLYTNEFIQNYEPCNEQENKIYSIDKKSNVVKKVGENLDKQCKETVNFTEESDETNMVAEEFNGEWDGLSKVEKEEYCAFNDQAVTEGNKVIHEVSGISDERNDVVEKVCDSSDERYQVAKEVGERSHQRNNNTMAKEGNDKWDVKKNIEEEENYKINDNVLIRYFIRKSVVQFAESEGGTVAVVINKWITPKKREIYWPPVKEAKAFDKLLQRCSSPNEQWKLYEIDRVFYQTDCQGQVVSLLAKIKAQNDVILAILKDRAGNTNALKPEFKFPLETFQDLETVEQLLTNTENCANLTSYLKSLGGHDLKNKVSRVMKYTLSDSLASKFNFYGKRSEKKPFSELRLREFIVESLKSSSPRITEKDIEDDIKVWLKHAPERAKKRLSKENNNVIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01156263;
- 90% Identity
- iTF_00634285; iTF_00634286; iTF_00634287; iTF_00634290;
- 80% Identity
- -