Ecre022461.1
Basic Information
- Insect
- Ectropis crepuscularia
- Gene Symbol
- -
- Assembly
- GCA_963693475.1
- Location
- OY856350.1:24091715-24094071[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-11 5.3e-09 37.1 0.0 4 39 28 64 25 68 0.93 2 2 1.1 2.8e+02 2.8 0.1 23 37 459 473 459 478 0.83
Sequence Information
- Coding Sequence
- atggttcgtGAATACAAGAGAACGTATCGGCACGTAAGACTTGGAAAAACATTCTTACCTTATGTGTCTTATACCACAAAAGACCTAGAAAATGCTGTGCGTGAAGTGAGAGAAGGAGACAGTTCAGTTCGACAAGCAGCAACCAAATATAATATACCCAAAAGCACACTTGCCCGTAAATGTAAGAAAGACACGATTTATGAAAGTGCAGagaaaattctAGAATCTTGCGAGTCACTAAACATTTCATTCGTCTGCTTGCCGTCCAAGTCCACACACTTGATGCAACCGTTAGATGTCGCCTTTTATGGGCCGTTAAAGAAATACTGGAAGAACATTCTAACAAACTGGAAAACGACAGCAGATGgtagaaaatataaaacaatggcAAAGTCTTGTTTTCCAAAGCTTCTAGCTCAATTATGTGATTTAATGATTGAGAAAGACGTGATATCAGCCAATTTAAAAGCGGGTTTTGAAAAGAGCGGTCTATTCCCTGTAAACCCTGAAAGACCGAAATCAAGACTACCAAGGGCACTGGTTACAGCTGCAGAAGTTAACCTAGCTACTTCTGAAGTTGTGATTGATATATTACAAGACATGAGAGGCTTTAAGGACACTGCTCCAAGCAAAAGAAGGAAGCGGTGCGATGTAGAACCAGGGAAAAGCATATGTGCAAAAGATTTAACTCCAAAACCAACAACGAGCACTAAAGGCAAAGGACAAGGAAAAAAAACCAAAACTcatgtaaacaaaaaaattacaacgtcATCTCAGAATATCAACAAAAGTAGGAATCCAACAAAAAAGAGACTGAACAAAGCTCAACATGATTTAGACGAATCAACCAGTGTGTCTGATAATATGAGCCAGCACAGTGATTCTGATTTGATGGATTTAGATTTGAGAAAAGAGTATGGCAGTGATGATACCAACTGTTCTGAAGAACAAGCTTTTTCGATATCCTATTTTGAAAATAGAGTTCTATCAGCAGAGCCCGAACCAGGCCCTAGTGGAGAATCATCACGACGTCGTGCAGTGAAACCAAGACCAGAGCCTTGTGAGAATACATTGCCAGACTATGAAGAGGAGTTAATATTAGGTTCTAATGAAAAGGCAGCACGTAGTCGTAATGAGGCGTCAATGGCAAGCCCGAACGAAGAGGAGCTAGCACAAAAGCCAGGGTATGGCTCTAACCTGGAGTCAGTACAACACCATAGTGGTCAGCTAGCTCAGAACTGTGAGGAAGAGATAATAGCATGTCCACTAGCACAAGGCTCTAATGAGCAGCCAGCACCAGGCCCAATTAATCAGCTAGAACCAGAAAATAATGAGGAGGTAGCAGGTTATTCAAATGAAAATTTACCACCAGATTCTAATATTTATAACGTAAATGATACAGTCTTAGTGAGGTACTACATTAAAAAGTCTTGGAAATATTATGTTGGCGTGATAGAACATTTTGAAAACTATTCTTACACCATTTCATTCTACAAAACTGTACGGCAAAATGATTCAGACATAATACTTATGAAACCTAAAAGAGTCGACCGAGATATTTTACCAGAAGTTTCATTGGTGAAACatattaatataaaacaaatttcatccaaacctGAAAAATATTTGGTTGAAAATGAAGATGacaagatttattttgattgttaa
- Protein Sequence
- MVREYKRTYRHVRLGKTFLPYVSYTTKDLENAVREVREGDSSVRQAATKYNIPKSTLARKCKKDTIYESAEKILESCESLNISFVCLPSKSTHLMQPLDVAFYGPLKKYWKNILTNWKTTADGRKYKTMAKSCFPKLLAQLCDLMIEKDVISANLKAGFEKSGLFPVNPERPKSRLPRALVTAAEVNLATSEVVIDILQDMRGFKDTAPSKRRKRCDVEPGKSICAKDLTPKPTTSTKGKGQGKKTKTHVNKKITTSSQNINKSRNPTKKRLNKAQHDLDESTSVSDNMSQHSDSDLMDLDLRKEYGSDDTNCSEEQAFSISYFENRVLSAEPEPGPSGESSRRRAVKPRPEPCENTLPDYEEELILGSNEKAARSRNEASMASPNEEELAQKPGYGSNLESVQHHSGQLAQNCEEEIIACPLAQGSNEQPAPGPINQLEPENNEEVAGYSNENLPPDSNIYNVNDTVLVRYYIKKSWKYYVGVIEHFENYSYTISFYKTVRQNDSDIILMKPKRVDRDILPEVSLVKHINIKQISSKPEKYLVENEDDKIYFDC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01182599;
- 90% Identity
- iTF_01182599;
- 80% Identity
- -