Ecre021740.1
Basic Information
- Insect
- Ectropis crepuscularia
- Gene Symbol
- -
- Assembly
- GCA_963693475.1
- Location
- OY856350.1:10259656-10260310[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-13 3.2e-11 44.3 0.0 3 41 17 55 15 57 0.94
Sequence Information
- Coding Sequence
- ATGCCAAGTACATACAAACGGAAGACGCAGCAACAGACATGGGACTCGGAATCAATGGAAAAAGCTATAAGAGCTGTAAGAAACGAAGAAATGGGCTACCTCAAGGCTAGCAAAGAATTCGAAGTTCCTCGATCGACGCTCAAAAGACGTGTAAAAGGAATAAATAAAGAAgctgttgaaaataaaaaactattggGGTCTTGCCGTCCAACCTTTAGTCCGGAGCAAGAACAAGAATTGGTGCATCACATTTTAGAAATGGAAAAGCGATTTTACGGATTAACTTTACAAGATGTACGGAGACTGGCTTATCAGTTGGCTGAACGCAATAATATAGAACACAAGTTTAATAAAGAAACTGAAATGGCTGGAAAAGCATGGACTTCTGCTTTTAGAAAACGTCATCCGGAACTGGCACTAAGAAGCCCTGAAGCAACCTCACTTGCTCGAGCACAGGGCTTTAATAAATGCAGAGTAAGAGCTCCAAAATATTGGCACAAAAAGGAAAGAAGCAGGTTGGCGCCATCACCTCAGCAGAGCGAGGTACATTAA
- Protein Sequence
- MPSTYKRKTQQQTWDSESMEKAIRAVRNEEMGYLKASKEFEVPRSTLKRRVKGINKEAVENKKLLGSCRPTFSPEQEQELVHHILEMEKRFYGLTLQDVRRLAYQLAERNNIEHKFNKETEMAGKAWTSAFRKRHPELALRSPEATSLARAQGFNKCRVRAPKYWHKKERSRLAPSPQQSEVH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01118194; iTF_00895827; iTF_00001953; iTF_00001858; iTF_01192550; iTF_00002119; iTF_00123277; iTF_00123278; iTF_00123279; iTF_00001878; iTF_01230454; iTF_00771801; iTF_01087936;
- 90% Identity
- iTF_01118194;
- 80% Identity
- -