Ecav005003.1
Basic Information
- Insect
- Ectemnius cavifrons
- Gene Symbol
- -
- Assembly
- GCA_964023945.1
- Location
- OZ030377.1:8719768-8725861[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.073 6.6 7.5 0.4 2 20 185 203 184 205 0.94 2 23 5.6 5e+02 1.6 0.2 1 15 212 226 212 230 0.88 3 23 0.11 9.6 7.0 3.6 2 23 244 266 243 266 0.91 4 23 9.1e-05 0.0082 16.6 4.7 1 23 584 607 584 607 0.92 5 23 0.28 25 5.6 1.3 5 23 614 633 613 633 0.94 6 23 7.9e-05 0.007 16.8 1.3 2 23 640 661 639 661 0.96 7 23 5.9 5.3e+02 1.5 1.4 3 19 690 706 688 709 0.75 8 23 0.022 2 9.1 0.2 2 22 846 866 845 866 0.95 9 23 0.31 28 5.5 0.8 1 23 873 896 873 896 0.96 10 23 0.31 28 5.5 2.7 3 23 908 929 907 929 0.92 11 23 2.3 2.1e+02 2.8 0.1 3 19 954 970 952 973 0.89 12 23 1.2 1.1e+02 3.6 6.5 1 23 980 1003 980 1003 0.93 13 23 0.093 8.4 7.2 4.0 1 23 1014 1037 1014 1037 0.94 14 23 0.017 1.5 9.5 0.1 3 19 1080 1096 1078 1098 0.95 15 23 0.72 64 4.4 2.2 1 23 1106 1129 1106 1129 0.86 16 23 0.76 68 4.3 2.5 1 23 1138 1161 1138 1161 0.87 17 23 0.045 4 8.2 0.0 2 20 1205 1223 1204 1225 0.94 18 23 0.034 3 8.5 1.3 1 23 1232 1254 1232 1254 0.98 19 23 0.0056 0.51 11.0 1.8 1 23 1264 1287 1264 1287 0.94 20 23 0.53 48 4.8 0.6 1 21 1459 1479 1459 1480 0.95 21 23 2.5 2.2e+02 2.7 1.8 1 23 1487 1509 1487 1509 0.87 22 23 0.039 3.5 8.4 7.9 1 23 1522 1545 1522 1545 0.96 23 23 0.00016 0.015 15.8 2.0 1 23 1707 1730 1707 1730 0.97
Sequence Information
- Coding Sequence
- ATGGCTCGAACAGTAATCTATGAAAGAGGGGTTCACTCTATTGTTGCTGATAACACTTTGTATGAAAAGCTAAATTCTCTGGAAAATGGCTTGAAGATCAAAGAAGAGCCGCCGGATTCAGATAACGAGCGCTCAAACAATGAAACTTTAGTGCCTGAAGATGATGCTGGACCTTATGCTTGCAGCCAAAAAGCACAATCAAACGTGACATCAAGCCCTTCTTTAAACAACAAGGAAAATGAGTGTGTGCCTGGAACACGTTCGCGAAAGAAAAGTAGAAAGCATGACGGATATAGGAAGCGTAAAAAAACAAGACGATCAACGCCTAAGATTGTGTGTAAAAGCAAATGTGCCGAAAATccagaatgcagtaagaaTGAGGAAAGAGAAATGAAAGGAGTAGCCGAAGAcacatatcaatcttttaagccaagaaaagaagaagacaaTTCGGACCAAAGAAATCAAACCTCCCAACGCTACCACTTACCTAAACGGTATTCAAAAGTCAAGTGCAGACCAAAATCACAGCCTGAAGAAGAAATTCCATTGCAGTGTGATGTCTGCTTCTTGCCAATGAAACATTCCTCGCAATTGACACGACACCAAGAATTACGTTCAGCAGATATCATGTATCCCTGCGAAAAGTGTGAAACATTGTTTGCTGATAAGCGCAGTGTTATTTTCCATAGTGAAAGTTGTTCGGGCGTTAAACACTCGCATGCTGTCTCTTGTGATTTCTGTGAGAAATTTTTCAGGACAAAACACATTCTACAAGCACACATATTTCATATGCATTCGGATCAAATATTTCAAACAGACCCAGTAAAAGTTAGCCCCGATACACGCAAGCACAAGAATTTAGCTACACCCAAAATAGGAGGACCAAGGACACCCAAAGGGAGATCGAGCTTATCTAAGACAGCTTCAAATGGGCCTAATTATCAGAACAATCAACAAGTTCTTAATTTCTGCAAAAATGACACCACTGAAGCATTAAACCCACATGACTTACTAAGTTCTCCTGTGAAAAGAATGCGACAAACAACACTTACAGAATTTCTTAAAGTTTCAAGTAAGAAAGTAGAAAATTTGATAATACCAAAGGATGAAGCAGCTGAAGCAAGTTCTACGAAAAGCAGAGAAAATAATAAGACGTGTTCTGATAAGTGCTCAAAGCCCTTTGTTCAGATTCACACTAATACAACCCTAATGATGGAACTCCTAAATAATTCAGGGCATGTCAAAGATGAACCATCAGATGAAGAGGTTCAAAACCTTACAAGCAGGCACAATACACCGTACAAACTTCGACCAACACGACCGACTGTTTACACTCCAGATACCTTTTACTATTTGGAATCGTCCAGGAAACGCAAAAGAGTATATAGTGAAACGGAGAGAACGTTGGGTAAAAAAGAGGGGCGTTTATCGAAAAAACCAAGACaagataataaaagaaatgaaaaCAAGATAAAAGCGAGCTTCGGCATTAAAGAATGTTACATTCGATTGGTCAGATATGACTCTGTTCAGAAAATGTCCGATTTAGTTTCTCAAGAAGGTCGAAAGCCGAGCACATCACAAAGGATAGACACTCTGCCGGACCCTTTAATCGACGGCCCAACAGCTTTGCAGAATCTTGAAGAACCAATATTAAACTTGAATGGATCAAGCATAGAAACGGATCGAGAAGTGAAACCCGAGCATCACCCTGAGGAAAGTAACCCGGAATCCCATGGTAAGCCGCATCAGTGTAAGatatgcaagaaaacattttccTCGAAGAAGAATTTAAGTGAGCATAAGGAATTATTTCATGTGGCATACGTATCTAGCGTATGCAATGCGCGGTATACATCGAAGTATAAGCTACTCCATCATTATTTGCGCCAACATACAATATTCAAGCGAACGGTTTGTTGCGTCTGCAAAGAGAGCTTTGCCAGTCGTTCACTTCTTCAGCGTCATTTACTTATTCATTGCGTTAGAGTATTACGTACTAAACATGACCGTTTTCCAGTTGATGTTATCATTAAGTGCAATGCTTTTCAAAAGAATCATCTGTGTGGCAATTGCGGGAAACGATTTTGGTTGTCTTCCTGCATGAAGTACCATGAGAATATCTGTTCCTCTCGAACTCGAGATCGCGTTCCAAAAACCAATCCCACTCAAAACGTTCCGTCCATTACACCACCCACCAGTGAGGAATGtcatattaataatacattacCGAGTGATAATGTTTCATCAGCAATGGATTCTGTAATGACACCTGCGTTAAATGAAGCTACGGTCACCAATCAATCACCATCCACATCTAAGTCAACAAAATTACGGACGCTGGAGAGATCAGTCAAGCGCGTATCAATGACCAGTGCAAGTCCTACGCATGAGAAACCTCGACTcaggaaaagggaaaagatCAGTTACGGTATCAAAGACACCTCCTCCGATAGTGAAGCGGAAAGTTCCACTTGTACACCCGAAAATATCACAACACCGGTCAGGACAGATTCTACACCTGCGGTCCTTGAATGTTCTGTATGCAATATCAAGTTTAACAGCATAGCAAAATTGAATTATCATACCCGAACGTACGGAGGCGAACTTAATCACCGGTGTGGTCTCTGCTCTCTTGCACTGCCGAATAAACGTCTCCTTGACCAGCACATACATATGGCTCACACTCAACAGTCATTAGGAAAAGACAAGAACAACTGCAAATTTTGTAATCAATCTTTCAATAGTGCGGACCTCCAGCAGATGCACGAAAAGCATCTCCATGCTTCTCAAATTACAGTTGTTCCAGAACAAACTTGGTTAAATGAGGAACAAGTCTGGAACATTAATACTGCTTGCAACACGTGTAATGTGGTGTTCGAAACCTACGACAGATTCGTCGAACATAACATGTACTATTATAAAGGACAATCGTTCACTTGTACATTCTGCGGGCAAACTTTTCATGGATTGTTCATGCTCCATCATCATAGCAAACTAGTCCATTATCCTGAAGCTACGCGGAAATCTTATTCCTATTCTTGCGACGCTTGCAATGAAGGTTTCAACCAAGAATCACATTTTCATGCGCACAAGCTACACGTTCATCTAAACGAGCCTAACAAGTCGTTCAATCCCTTGCCAGATACACAGGAGCAAGCATCTGTTTCTTCTATACAAATCGCCACTGTTCCCACCATAGAAACTAGGCAACTTGCCTTCGCCATTTATGGCTGTAACATTTGTCAAATGTTCTTCACGAGCGAGGCGGATCTTACGGCACATGAAACCGAATATTCAGTAAACGGCGACTATCTTTGCAATGGTTGCGACAAGAGATGCAGGACTCTCCTGATATTAAAGCAGCATTACAGTCTGAATCACATAGGACCCGATGTTCCGAACGCGTACAAGTGTAAACAATGTTTGGAAGTTTTCACTGCTGCTTCCTCATTGGCCTGTCACGAGAAACATCTCCATCCCGAAGAGAGTAGTCACAGATACGATCTGATTGCTGCTCTTGAAAAGAATGTCGATCGGGCAATCGGCACAAGGAAATCGGAGAAACTCGATCCGGCTAGCACCGGCAAACCAGGTTCAGCAATTCTCAAATGTCTTATATGTGGAATGGCAttcgagaaagagatagattTACGAGAACATTTATTTGAGTATTCAAACATTGGCGAGTACAGTTGCGCGGTCTGCCATCGGAAGTTCGCTGAGACAGCGCGACTTGAAGAGCACAAGATGAAACATTCGCGAATTAATACTATCCTCGCTGAGCACCATTGTCCTATATGCCAGGAAGGATTGACCAGTGCCTCAAACGTAAAAATCCACATGCTACACTTGCACGGATACGAAACCTTCCAAAGTGTCCTTGCTAAGCGGGGTTGCTTGTCCACCAAACTCCTATCTGATCATCCACCGAGTAACATCGAAAATAGCGACAGTGTACGTCATACAATCCCGGCACTACAAACTGACTCTGGCAATCAAGCTGATGTCGAATTAAGAGCACCTTCGGAAAAGCAGACTAACACTGTCATTGCAAACACCTTCGATAGTCTACCGGAAAGCAATTCTAACGTTCTTGGGGAGGGGCAATCTACGAGACATAGCGTAGAAGAAAACACCACTACTCTCATGACGGCAAGCACTTCTAACGCAGTTCTTGATACTGCAGCACAGACTAACTTGAATAAACCTACTCCGAATACCGTCAAGAGAATTAAACCCAATGCGCAAGATGTACAACCAAGGCAGCAAAATAAGGTCATCGTGGTAGATCCTCCAAGTCAGAGTGTAGCCAAACTCCTGAAGAATCTGGCAGCCTCAACAGATAGTGAGTCATTGGAAAATGTACAGTATCAGTGCGCGGTATGTTGCATCAGATTCAATAGTCGAAGGAATATTGCCAAGCATATCATCAAGTATGTGAATCGTGGTGACTTCTTGTGTGATATATGCCCACGGCGATTCCCCTGTGAATCAATCTATCAGGAGCACTATCGTAAACATCAAAGCAGTGAAGAAATCAAGTCCACTGAGTACCGGTACACTTGTCACCTTTGCAGGGAACACTTCCGGACTCAAAGGGCTTATCGTTCGCATCTGAACCACTTGCACAAGAAGAAAGATCCATTAAATCCCCAAAAAGATACTCAGCTGTTTCCAAGTAGCTCGACTGGTCAGCCTAAACAAcaacaattgaaaaataataattcactGAACTCTCAGACATCTTTACAAGCCGAACCACAAACTCCGAAGGTTTCCGTACAGCTCGAGAGCACGAAAAACGCACCGGAAGCAGATTCATCTACTGAATTTGTAAACGGAGTCCATATTGAAGATAAACCAAATCGATACAAGGAAGCTAAGACTAATGCTATGATTATCAATGTAGCAAAGCCGGTTTCCACTACATCCCAGAAAACATCATCCGCCAGCTTAGGCTATTATTCCTGTCAAGCTTGTTCCACGTCATTCGACAATTTCATGGCATACCATTTGCACTGCAAATCAGTACACCCACATCTGCTATTGCTCGTAGACTACATCTCTAGCGGGACGAATCCAGTATCTACAAGTGATACTTTGTTGAAGGAGTTCAAATGTACCAtctgtaatattatatttgcCGATGCGCACTCTTTCAAAAAGCATACGAAGAACATTCACGTCAAAGGTCCAAGTAACAGTTGCACTATTCCCATCGAGAATGGCTCGGAGGAGCTACGAATCGTGTGGGAAAAGAACCCTAATCCCAAATCTAGTAACAGTTCAGAAAGTGTAGGGCAGAAGAATGATGCGGTCGCGGTTAACTCTACAGATGCGGAGAGTAAAACCGTCGCGGAAAGTAAAAATATTCCTAGATTAAAAGTGAAGCCATTCGCGAAGATTATCGAAACTCTCACGATTGAGAATCAGGTGGAACCAGAGGCCAATGTCTTTTTTCGAATACCACAAAGAGCACAGGTGATTGTCACCGACGCTTATTCCAGCCAGCCTATGCAGAATATGGATATTTCGACCCCGAATGCGCCTCTCCCTCAATTTCAGTGA
- Protein Sequence
- MARTVIYERGVHSIVADNTLYEKLNSLENGLKIKEEPPDSDNERSNNETLVPEDDAGPYACSQKAQSNVTSSPSLNNKENECVPGTRSRKKSRKHDGYRKRKKTRRSTPKIVCKSKCAENPECSKNEEREMKGVAEDTYQSFKPRKEEDNSDQRNQTSQRYHLPKRYSKVKCRPKSQPEEEIPLQCDVCFLPMKHSSQLTRHQELRSADIMYPCEKCETLFADKRSVIFHSESCSGVKHSHAVSCDFCEKFFRTKHILQAHIFHMHSDQIFQTDPVKVSPDTRKHKNLATPKIGGPRTPKGRSSLSKTASNGPNYQNNQQVLNFCKNDTTEALNPHDLLSSPVKRMRQTTLTEFLKVSSKKVENLIIPKDEAAEASSTKSRENNKTCSDKCSKPFVQIHTNTTLMMELLNNSGHVKDEPSDEEVQNLTSRHNTPYKLRPTRPTVYTPDTFYYLESSRKRKRVYSETERTLGKKEGRLSKKPRQDNKRNENKIKASFGIKECYIRLVRYDSVQKMSDLVSQEGRKPSTSQRIDTLPDPLIDGPTALQNLEEPILNLNGSSIETDREVKPEHHPEESNPESHGKPHQCKICKKTFSSKKNLSEHKELFHVAYVSSVCNARYTSKYKLLHHYLRQHTIFKRTVCCVCKESFASRSLLQRHLLIHCVRVLRTKHDRFPVDVIIKCNAFQKNHLCGNCGKRFWLSSCMKYHENICSSRTRDRVPKTNPTQNVPSITPPTSEECHINNTLPSDNVSSAMDSVMTPALNEATVTNQSPSTSKSTKLRTLERSVKRVSMTSASPTHEKPRLRKREKISYGIKDTSSDSEAESSTCTPENITTPVRTDSTPAVLECSVCNIKFNSIAKLNYHTRTYGGELNHRCGLCSLALPNKRLLDQHIHMAHTQQSLGKDKNNCKFCNQSFNSADLQQMHEKHLHASQITVVPEQTWLNEEQVWNINTACNTCNVVFETYDRFVEHNMYYYKGQSFTCTFCGQTFHGLFMLHHHSKLVHYPEATRKSYSYSCDACNEGFNQESHFHAHKLHVHLNEPNKSFNPLPDTQEQASVSSIQIATVPTIETRQLAFAIYGCNICQMFFTSEADLTAHETEYSVNGDYLCNGCDKRCRTLLILKQHYSLNHIGPDVPNAYKCKQCLEVFTAASSLACHEKHLHPEESSHRYDLIAALEKNVDRAIGTRKSEKLDPASTGKPGSAILKCLICGMAFEKEIDLREHLFEYSNIGEYSCAVCHRKFAETARLEEHKMKHSRINTILAEHHCPICQEGLTSASNVKIHMLHLHGYETFQSVLAKRGCLSTKLLSDHPPSNIENSDSVRHTIPALQTDSGNQADVELRAPSEKQTNTVIANTFDSLPESNSNVLGEGQSTRHSVEENTTTLMTASTSNAVLDTAAQTNLNKPTPNTVKRIKPNAQDVQPRQQNKVIVVDPPSQSVAKLLKNLAASTDSESLENVQYQCAVCCIRFNSRRNIAKHIIKYVNRGDFLCDICPRRFPCESIYQEHYRKHQSSEEIKSTEYRYTCHLCREHFRTQRAYRSHLNHLHKKKDPLNPQKDTQLFPSSSTGQPKQQQLKNNNSLNSQTSLQAEPQTPKVSVQLESTKNAPEADSSTEFVNGVHIEDKPNRYKEAKTNAMIINVAKPVSTTSQKTSSASLGYYSCQACSTSFDNFMAYHLHCKSVHPHLLLLVDYISSGTNPVSTSDTLLKEFKCTICNIIFADAHSFKKHTKNIHVKGPSNSCTIPIENGSEELRIVWEKNPNPKSSNSSESVGQKNDAVAVNSTDAESKTVAESKNIPRLKVKPFAKIIETLTIENQVEPEANVFFRIPQRAQVIVTDAYSSQPMQNMDISTPNAPLPQFQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -