Basic Information

Gene Symbol
ZFX
Assembly
GCA_964023945.1
Location
OZ030385.1:12501268-12505873[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 1.3 1.1e+02 3.6 0.1 3 23 14 34 13 34 0.94
2 14 0.00031 0.027 15.0 2.6 2 23 1115 1137 1114 1137 0.97
3 14 0.01 0.92 10.2 0.1 2 23 1150 1171 1150 1171 0.98
4 14 1.5e-05 0.0014 19.1 3.1 2 23 1174 1195 1173 1195 0.97
5 14 0.013 1.1 9.9 0.3 1 23 1201 1223 1201 1223 0.95
6 14 2.5e-05 0.0022 18.4 4.5 2 23 1230 1251 1229 1252 0.95
7 14 0.11 9.9 6.9 3.7 5 23 1265 1283 1264 1283 0.97
8 14 2.3e-05 0.002 18.5 1.5 3 23 1290 1311 1289 1311 0.97
9 14 0.01 0.92 10.2 0.3 2 23 1327 1347 1326 1347 0.97
10 14 6.8e-05 0.0061 17.0 0.7 1 20 1353 1372 1353 1375 0.92
11 14 8.5e-05 0.0076 16.7 2.7 1 23 1383 1405 1383 1405 0.99
12 14 0.0024 0.21 12.2 3.2 1 23 1411 1433 1411 1433 0.97
13 14 4.3e-06 0.00038 20.8 3.9 1 23 1439 1461 1439 1461 0.99
14 14 0.0015 0.13 12.8 6.3 1 23 1467 1489 1467 1490 0.96

Sequence Information

Coding Sequence
aTGATGGACAGTGCCAATATTGATGGGGCCGCGGTGGCTTGTCCAGTTTGTACCTTGTACCTCAGGGAAGGTATCAGCTTACAGAGACACTTGGATACCCATCCAAAGGAACAGGTGATAGAGGCTCTGATAAAGGCAAGTGCTACTAGTGCCCAGGGCCAGCAAACTCAACTTTCACCAGTTCCATTGATTTCTACAGCCTCTGTGCAGCCTCCTAATAATACTCCGCATCTTGCGCATAATTCACAAGTCTCTCCTCAAACTCCATATCCCATAGGACCAGTATTTGAGTGCCCGCCAATCGGAACAGTGATGCCTCCCCAATTCGCCTCCTTTAGTTACCAACAATTTGTAAATAACGGTACTGTCATGATACCACAATACGCTATGGCTCCGCAGGCGAATCAAATGATGCAGATGCTGTATAATCCTTATAGTTTATATCAACAGCAACAGATCCCGACAGTGCAAATGATATCACCGGTTAATACAGTACCTAACGCAACTAGGGTCAGGACAGTTCCAACTCTAGCCAATGAAACTACCTCCAGGCCTACCATTACAGTACCGGTGAATAGTAACGAACCCAAGGAGATATTGCCTGAAATTTTGTCCGAGCAAGAGCCCGAGCCAGAGCCCGAGCAAGAGACCGATACACAAACAGAGCCGCTATCGGGAAGACTAGTATCCGAGTTAGACGTCGCGAGACTTTCGTCACCTCTGACTCAGAATGACACCATCCATCAAGAGCATAATGGAATGGGCACCGAAGAGGTACGGCGAGATCACCACCAAAATCGCCGGCTTCCACATTCACTGGCTATTACTTGCAATATTACCAATATTATGGACGATGAAGACAAAGCCGAGACCGTGCTGCCCGACATCGATAACATCCAACCATCGAATGCGTCGATTGAACTTCCTAGTACAATGTGTTGTAATATCACCTGTCATGATGCACCCATTgtacaacagcagcagcagcagcaacaacaagaACAACAGGAACAGCCACAAGAGGAGTTCATATCCACTGTGTATAAAGAGTGTATCCAAGAGAATATGTCGGATGAGATTTCTGTGACTACTATGTCCGAAGATAAACACAACGAGTATGGAAGAATCAATGATAGAGCATCGTGCAATCAGGATGTACAACTGGCAGAGGGTATGAATCCTTCCAAGAGACAACCACCGAGTACGTCATCTAAGGAGACTTGCCAACCGGAAGTGGAACAACTAGAGCACCTGTTGATCACAATCATGGAGAGAGAACTCGGTGGCGTGTCGGAGAATGAAAGAAGGAACGACGGGGATGAGAGAAAAAGCGATGTGCCTAGGCAGAAGACATTAAAGGATGAAGGCGACGGTGGCGGGGGcggagacggagacggagacggagacggagacggagacggagacggagacggagacggagacggagacggagacggagacggagacggagacggTGACGGTGACGGTGACGGTGACGGTGACGGTGACGGTGACGGTgacggagacggagacggTGACGGAGACGGAGACGCAGTTATTGAAGAGGGCATATGCACGACGGATAGGGCTAATCATGAAACTACCGGGGATGCCGCCGGCTCCGATGTAAAGTCAACAGTGAATTCAGTGGCACGACTAACTAACGAGACGGACAAGAATTCTTACTGTACCTACAGATACAAGCATAGCCTATCGGCCCCCACCTCTCCTATCTCCCACAAGAAAGCCTATCATCCTTATTCGACGCATTCGGAGTTTGGATCTGCGGAAAACTTGAACGTATATCCAGCTGGGTTCGATGCCAGCGTGCtgcaagaggaggaagaagaagatgaggATGAGGACGACGAGGAGGATGAAGAAGACGAGATGGACGAGGAAGATGATTCCGAGGCGAATGAGAACGATGAGGATAACGAGAGGCTCGATCTGGAGGGCAACTTGGACGAAGCTGACATGGAAATCGAAGAGATTCCCAGTCCACATACACCAGCTGGAAAGTATGGAGAGTGTACCGATTACATTAGGTCACATACGCCACTCTCCACGAGTAGTGGCATATCTGTGCTCAGAGTTAGGAAGGACTTGAGCAAGTCATGTTCACCAATGTCAGTACATTCTTTTGCTCATATCGAAAGCAACGGTACAAACCAAGATGAATCGAGCAATAATCCTGCCAAAAGTGGTGGGAGCTCTTTTAAGACTCCGATCAATTGTTTGCAAGTCAATGAAGAAGTTAGCAGCTTGTGTCAAGGCGCGCCCCTCTGCGAGGAAGAGGCAGAAAACAAGCCAGTCTCGCAGCATATCACCAGCACGCACCACCAGCCTATCGTTACAGAAAATCTCAACAGCTTTCCCACTGCCAGTTCTCAGCAGGTTGCAGTGTCGCACGATTCTTACCCAGCAATGACAGCTAGCAACAagctagctcaaaattcaatGAGCCTTCCCGACTCGTTCGAAGCTGCCATCGGGATGGAAGCAAAGTCCTATCATTATTCAAAGCCGATTGTACAGAAGCAGTCGTTGGAGCTCTTGAACTTGAACGAGGACGCCCATGCGGGCCCAATGAATGTCTTTGAATTTGACGGCTTGCAAATTTTAGTTCCTAGCACATACATTAATGAGTCTTCACAGAAGGCAGTGAGCGCTACTAGCCAACAGTCTATGGCAAGTAGCGAAGGGGCTGTGGGCATCGATGAGGAAGTAAAGAGCATTAACATGAGAGCCGATGAAACAATGCCACCAAGAGGAGAGCTATCCGAGCAAGAGAGCAATGGCTACACGGAGCAATCTGCATGGCAGCTATACATGGGCCAGGAATCTTCGCGTATGTCAACTTCGTACGACTTGATGGCACGAGAAAGTTGGGAAGAATCGGAAGGATCGGACAATGAGATTGGAGGCCCTTTATTGGACAGTCGGTCGCTAGCAACGCATTTCACTTCGAGCTTATTCCTGGACCGGGATAGGAAGACCCCGACTAAGAGAACCTTCAAGTGTTATCACTGTTCGGAAGTGTTCGATTGTCCAAAGGAACGCCGAGTACATAGTACTACTGTCCATAAAGAGGCAGGACCTAGCAGTAGCGGCAGAGAAAGCGGTAGCGGGGATCAAATCGAAGTAAAGGATATCAAGTTACTGGATGGACGCGTTAACATTTTCGAAGATATATTTGTGCCGGGCTTACACGTCCAACAGATATATCACCATCAGCAGCCTCTATTACACCAGCTTCAACCGGCTCAATCGTCAGAGTTGGACAAGCTCGATTCTGAACGTAAAGCCGATAGTGTGGTGATGCAGTCGAGTGTCGAAGTAACTTGCACGATATGCAATCAACGGTTTAACAGTGAAAAGTCATTGCAATTGCATCACAGAAGAGTTCACGTGGCGGAAACGTCGAAACGCATTCGCGAGAGCGCAAAGTGTCAAATTTGCAACGAAGAATTCCCTTCCGTCTTATTGTTTAACGCACACCTGAAGGTTCATCCGTTGGAGTGCAGTCAGTGCGGCAAATACTTTTATAGAAAGCAGAATTTCAAACTGCACATGAAGCGACATTTGGGTATCAAGCCATTTCCGTGCACTGTGTGCGATAAAGCCTTCTTGACAAAGCAGAAATTGGACGAGCACACTAACGGTCATACAGGGAACGCGCCGGTTAAGTGCAACCTTTGTAACGAGACCTTTCGCCGATATTCCAATTTGACGCAGCACAAGAATAGGCATCATCTTAACATTAAGAAGAAACTTAAGGATTACATATGCCACTGTGGCGAAGTCTTTCACACCAAGAAGAAATTAGCTTGGCATAAAGAGACGCACGATGAAAAGCCAAAGGCTTGCACCTACTGTAACGAAAGATTTATTCACATGGCAAGCTTGACCCGGCATATGCGCCGTGCACACAATAGAAGATTTGTTCCTGATGCACACAGGGAGAGTGAAAATGTGGAATGTCCGATCTGTAAATGTATTTATCTACGCTCTTCTCTAGCAGTGCATATGCGTGTTCATAATGGCGAAAGACCGTACGAATGCCAAGTTTGCTCAAAAGCATTCAGTACTAAGTGGAATTTACAGTTGCACAAATGGACGCACGCGGCTCGCAGTACTAAACCATTTAAATGTAATCAGTGCAGCGCTGCATTTTACAGGCACAGTGATTATACTGCTCATATGAATTCCCACAGGAATGTTCGACCCTACACGTGCAACTATTGCGGAGCCCAATTCATCCGAAAGTACAACTGTCTAAGGCACGTGAAGGAGCACGAGGAAAACAAAGCATACACCTGCGATGTTTGCAATAAAACCTTTCACAGGTCCTACTACCTGAAAGAGCATTTAAGGGTACACTCAGGTGCGAGACCTTATACATGCCATATCTGCGGCAAGTCAAGCGGCACCAAATCCAATCACAATAAGCATGTCAGAATCCATCATGCACGAGAACCGGTCAACACGGAGAATTAA
Protein Sequence
MMDSANIDGAAVACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASATSAQGQQTQLSPVPLISTASVQPPNNTPHLAHNSQVSPQTPYPIGPVFECPPIGTVMPPQFASFSYQQFVNNGTVMIPQYAMAPQANQMMQMLYNPYSLYQQQQIPTVQMISPVNTVPNATRVRTVPTLANETTSRPTITVPVNSNEPKEILPEILSEQEPEPEPEQETDTQTEPLSGRLVSELDVARLSSPLTQNDTIHQEHNGMGTEEVRRDHHQNRRLPHSLAITCNITNIMDDEDKAETVLPDIDNIQPSNASIELPSTMCCNITCHDAPIVQQQQQQQQQEQQEQPQEEFISTVYKECIQENMSDEISVTTMSEDKHNEYGRINDRASCNQDVQLAEGMNPSKRQPPSTSSKETCQPEVEQLEHLLITIMERELGGVSENERRNDGDERKSDVPRQKTLKDEGDGGGGGDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGDGDAVIEEGICTTDRANHETTGDAAGSDVKSTVNSVARLTNETDKNSYCTYRYKHSLSAPTSPISHKKAYHPYSTHSEFGSAENLNVYPAGFDASVLQEEEEEDEDEDDEEDEEDEMDEEDDSEANENDEDNERLDLEGNLDEADMEIEEIPSPHTPAGKYGECTDYIRSHTPLSTSSGISVLRVRKDLSKSCSPMSVHSFAHIESNGTNQDESSNNPAKSGGSSFKTPINCLQVNEEVSSLCQGAPLCEEEAENKPVSQHITSTHHQPIVTENLNSFPTASSQQVAVSHDSYPAMTASNKLAQNSMSLPDSFEAAIGMEAKSYHYSKPIVQKQSLELLNLNEDAHAGPMNVFEFDGLQILVPSTYINESSQKAVSATSQQSMASSEGAVGIDEEVKSINMRADETMPPRGELSEQESNGYTEQSAWQLYMGQESSRMSTSYDLMARESWEESEGSDNEIGGPLLDSRSLATHFTSSLFLDRDRKTPTKRTFKCYHCSEVFDCPKERRVHSTTVHKEAGPSSSGRESGSGDQIEVKDIKLLDGRVNIFEDIFVPGLHVQQIYHHQQPLLHQLQPAQSSELDKLDSERKADSVVMQSSVEVTCTICNQRFNSEKSLQLHHRRVHVAETSKRIRESAKCQICNEEFPSVLLFNAHLKVHPLECSQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAHRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSGTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-