Ecav012410.1
Basic Information
- Insect
- Ectemnius cavifrons
- Gene Symbol
- -
- Assembly
- GCA_964023945.1
- Location
- OZ030384.1:7225524-7228310[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.1 1e+02 3.7 0.1 2 20 121 138 120 140 0.92 2 14 0.00044 0.039 14.5 1.4 2 20 147 165 146 168 0.94 3 14 0.076 6.8 7.4 4.3 1 23 174 197 174 197 0.93 4 14 3.1e-06 0.00028 21.2 0.9 1 23 203 225 203 225 0.98 5 14 3.7e-05 0.0033 17.9 1.8 1 23 369 391 369 391 0.97 6 14 0.00072 0.064 13.8 0.2 2 22 401 421 400 421 0.94 7 14 0.00029 0.026 15.0 2.6 1 20 443 462 443 465 0.92 8 14 0.018 1.6 9.4 0.5 1 23 470 493 470 493 0.95 9 14 1.2e-06 0.00011 22.5 0.3 1 23 499 521 499 521 0.98 10 14 0.002 0.18 12.4 6.3 1 23 528 550 528 550 0.98 11 14 0.00034 0.031 14.8 0.4 3 23 558 578 556 578 0.97 12 14 0.00039 0.035 14.6 0.2 1 23 584 607 584 607 0.96 13 14 0.62 56 4.6 0.1 1 23 621 643 621 643 0.92 14 14 0.011 1 10.0 0.0 2 23 906 927 905 927 0.96
Sequence Information
- Coding Sequence
- ATGGAAACTCACGAGAATGAACAGTATATCACGTTTCCATTGTCGGGAGTTCACAATACCATTCAAGAGAACATTATTTCTCATGAGGAAATATGCGAACCCGTTGATGAATGTGTATTGCAAGAAGGACTGACCGAAGTCTCCGTTACTGATGTCAATTCAAGCATCGGGGATACGCAGGTGGCAGTTGAAATTTTAGCCGAACAATCTGATGAAGAAGATGAGAGTCAAGTGGTTTATCCTATATATATCAAGCAAGAAGAACAGCAGCAGTATACTTCTGGTGATGACGAGTCAATGGCTGTGGAAGCGCTCAGGCAGCTCGGTGGAATGTATCCGTACTTTGAGGATAAGAAATTGAAATGTCCCAATTGCGCGAATCTTTTTACACAAGTGGAACTGACAAAGCATCAGGAAGCTTGCACGATTAACAAATTATCTTGCACAACTTGCGGAGAACGTTTTGAGAGAAAGATTGATCTGAACAATCACATGGTTTGCCATCAAGTAGATAGGCCGCATGCATGCAGAACTTGTGGGAATTTGTTTAGATCGAAAAGCAATTTACGGTGCCATATGTTGcaagtgcaccaagttgataAACCTCACAAATGTACAATTTGTGGAGCAGACTTTCAACGTCCTTCGAGTCTATCCAATCATATGAAGATCCATACTTATGTTGCCGGTCGTGCCATAATGCAGAACCAAGGAGAAAATACATCCCAATCGGAAGATACATTTCGGAAATGGCCAGAGAGTATGTCCGAATCGCAAAATACCCATGTTCCAGCAGCAACGGTTCAGAACATACAAAATTATGATTCGTGTCAAGTACAATGGAGTGTTCCTTCGTACAACTTTCCGAACGAACAGTCGAATGTTAATGCAGTTTCCAATCATCAAAGTAAACTCGACACTTTGCAAGAGTTCACAGTTATGCCGAATGGAGAAGTTACACAGTTTGAATACAACCAGCAAGGAAATGTCAACAATCAACTGAATCAACAATACAATCTTCCACTAAATACATTTAGTAATCAAGATGAAGTAATGGAAAACCGGAAGAATTATTCGGAAACCGAGACAACTGGTCCCAAGCAACATACCTGCAGGCATTGCGGGATTAGTTTCTCTCGTGCAACCGCATTGGCCTCTCATGAAAAAATTCACAGTACCAAGGGTTGGAGCATGCCCATTGAATGTGAATTCTGTGATAAACAGTTCCAGGATGCAAATCATTTAGCGAGTCATCAGATGACATGCGCTAAGAAAATGATGCAAGAGAACCTGGAGCAGGGTGTTCCGAATAGTAAATGGGGTAAACATGCCTGTTCGGAATGTGGAAAAAAGTTCACCACGAAACAGAAAATGTTTAGACACCAATGGATTCATAGAAAGAAGACACATTCTTGTGAAGTGTGTGGATCTCAGTTCGAAAAGCAGAATGAATTAGACGAGCATCGATTATCAGCACATCCTGGCGATTCACCGTTTACTTGCACGGAATGTGGCAAGAGTTTCGTGTCGCGTCAAGGTCTCTGGGAACATGGAAGAACACACGCGGGAAGCCCGGCCCATTTCCATTGCGATACGTGCTCGAAAACATTCTCATCGCGACAAGGGTACCTTATACATCATCGCACACATACTGGAGAGAGACCGTATGGTTGTAAATTCTGCTGGAAAGCATTTAGGGATGGTGGAACTTTGAGAAAGCATGAACGAATACATACAGGTGAGAGACCACACGTATGTCCACTGTGTTCAAGAGCATTTAATCAGAAGGTCGTACTACGCGAGCATGTTCGATGGGTTCATGCGGCTGGTAAAAACGAAACCGAAGTAACAGGACCTCCTTTCCCTTGTCCATTATGTGGTGCATTAAATCAAGATAGGGATGAGTTATGCGCGCATATAGTTAAACACTCGGATCAAATGATTGCCGAGGCAAAAGCtaaaacaaataataatcCATCAAAGCCGAAACCTGCCAAGAAGAAATCGAAGACTTCGGCAAGCACCAGTTCCCAAACGAAGCAAACTGTTGTAAATCGTGTGATATCAAGAAGTGAGCAGAACGAAGCACTACTATCAATCACTGAGCCCGATAAGGCCGAAAATCCGCAATTAATAAGCGATCAACATAACAACGCCTACCTCATAGTTGCTACTGAAAAACGTAGTGAGAGTTTCATAACAATATCGCAGATAAAGCCGAATAATGTACAACTGATAGTGCCAGAGAAGCAGCGTGAAAACGTGCAAGTCTCGTCGAACGAGGAAGTAGCCGTGGAATCAGTGACAATTATGGATGTGGATAAGCAGAACAATTCCGCACACATAATTGCTACGGATCACGAGAGACGTGCGCTTCATCCTACAACACGGCAAAACGAGATTGCAGCGATGCATTTAATACAATCGTCCAAGGAAAGCAATACACTGCACTTAATATCAAAGCAGAATGAATCGCTTCCTGTTCTAGCAGTTCCAAATCCGCAAGGGCATGAGAATTTCTCCAGTCAAATTGCTGAAATTAATAGTACGGATACGTCGATGCGTATGGTAACACATCCTGCAACGAGGACGGAAAACCTGGAGGATCACGATGAATCTGTACAGGAAGCATTAATACAAGACGATGTGTCTCAAACCGCTGTGATACAAGTTGTACAGTATCATCAACAAGAGAGCGATGACTGTGAGGAGTTGGTCTGTGGTATCTGTGGCGAAGACTTTAATGATAAGAATATACTGATGGAACACGTTAAAATACACATTTAA
- Protein Sequence
- METHENEQYITFPLSGVHNTIQENIISHEEICEPVDECVLQEGLTEVSVTDVNSSIGDTQVAVEILAEQSDEEDESQVVYPIYIKQEEQQQYTSGDDESMAVEALRQLGGMYPYFEDKKLKCPNCANLFTQVELTKHQEACTINKLSCTTCGERFERKIDLNNHMVCHQVDRPHACRTCGNLFRSKSNLRCHMLQVHQVDKPHKCTICGADFQRPSSLSNHMKIHTYVAGRAIMQNQGENTSQSEDTFRKWPESMSESQNTHVPAATVQNIQNYDSCQVQWSVPSYNFPNEQSNVNAVSNHQSKLDTLQEFTVMPNGEVTQFEYNQQGNVNNQLNQQYNLPLNTFSNQDEVMENRKNYSETETTGPKQHTCRHCGISFSRATALASHEKIHSTKGWSMPIECEFCDKQFQDANHLASHQMTCAKKMMQENLEQGVPNSKWGKHACSECGKKFTTKQKMFRHQWIHRKKTHSCEVCGSQFEKQNELDEHRLSAHPGDSPFTCTECGKSFVSRQGLWEHGRTHAGSPAHFHCDTCSKTFSSRQGYLIHHRTHTGERPYGCKFCWKAFRDGGTLRKHERIHTGERPHVCPLCSRAFNQKVVLREHVRWVHAAGKNETEVTGPPFPCPLCGALNQDRDELCAHIVKHSDQMIAEAKAKTNNNPSKPKPAKKKSKTSASTSSQTKQTVVNRVISRSEQNEALLSITEPDKAENPQLISDQHNNAYLIVATEKRSESFITISQIKPNNVQLIVPEKQRENVQVSSNEEVAVESVTIMDVDKQNNSAHIIATDHERRALHPTTRQNEIAAMHLIQSSKESNTLHLISKQNESLPVLAVPNPQGHENFSSQIAEINSTDTSMRMVTHPATRTENLEDHDESVQEALIQDDVSQTAVIQVVQYHQQESDDCEELVCGICGEDFNDKNILMEHVKIHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00391499;
- 90% Identity
- iTF_00391499;
- 80% Identity
- -