Ecav002718.1
Basic Information
- Insect
- Ectemnius cavifrons
- Gene Symbol
- -
- Assembly
- GCA_964023945.1
- Location
- OZ030375.1:21716073-21718489[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 9 8.1e+02 0.9 0.2 1 20 354 373 354 377 0.76 2 10 0.0085 0.76 10.4 3.2 1 23 384 406 384 406 0.97 3 10 0.00066 0.059 13.9 4.0 1 20 412 431 412 434 0.96 4 10 3.9e-06 0.00035 20.9 4.9 1 23 440 462 440 462 0.98 5 10 2.4e-06 0.00021 21.6 2.1 1 23 468 490 468 490 0.98 6 10 3e-06 0.00027 21.3 0.7 1 23 501 523 501 523 0.98 7 10 2.2e-08 2e-06 28.0 0.3 1 23 529 551 529 551 0.99 8 10 7e-06 0.00062 20.1 0.6 1 23 557 579 557 579 0.95 9 10 1.5e-05 0.0014 19.1 0.1 1 23 585 607 585 607 0.93 10 10 2.8e-05 0.0025 18.2 0.2 3 23 615 635 613 635 0.98
Sequence Information
- Coding Sequence
- ATGAGCTGGGAGATCAGCTGCGCCGATATGTGTCGGGCCTGCATGAAAGTCGATGGTGTTCTGCTACCGATGTACGACGACGACACCATCAGCAGAAAGAATCTGCCGGTGAAGCTGGCAGAGCTTACGTCCGTACGGATCGACCAATTCGATGGCCTGCCGAATAAGCTGTGCGCCAAGTGTGCTTACCGGACAGATGCTTTCTATGACTTTAGACTGCAAGTCCAGGCTACTGAGAAGAAGCTCAAGAAGATGTTTGAGACTCGGATCAAGCCTGGCAGTAAGGAAGAAGAAAGTATTGAGAATGGGTATGAACGCAAGACCAGTTCGAGTGAACCAGCAGAGTTAAGATCAGTAGATAGTAAGTTTGATAACAATTCTTTGAATAGCGTGGAACCATTTGAACAATCCTTATCCGAAATGATAACTGCGAATGGGGTTGGAGAACAAGCCTTGGAAATCGATGTATCAGAACTTGTACAGGCAAATGGAGAGATTGACAAGAATGATCTTCGTCTCAGGAACATGATCATTTCAAAAATGCAAGAACTCGAGGGTAAAGATCTCAGCAATGGGATACCGGATGAACTCTCGAAGCTCCTAGAATCTCAGAATCTTGACTACACAATAATGTACATACCGGAGTCAGACATTGATGTTTTGGACCAAGAAAATGGTGAAGGAAATTTGGTATTCAAGACTGATTCTCTTGAAGAAACAAGTGATATCAAAGAAATGCAGGAACTAGTTTCCAAAGATGATGTCATTGATAAAGAGGAACAAGAGGTTGAATATCTGCATATGGAAGATGAAGAGGATGCACAAGCTGTGAAAGACTTCAACGAGAATGGATCGTGGGAACCTGGATTTTCCGAGCGGACTCTATCAAAAGATCTATCTCACCAAAATGGATACAATGGTTCCACATTGAATCAGCAAAATGACTGTGATACTTCCGATTCCGACTACTTCGTCGATCCCAAGGATAATATCCTTGGTAGCCTCAACGATACGATAACGCGAATAAAAGAGATCAAGATTGAAGGGGATGTTACGCAATTCCAGTGCACTCTGTGTTTGCAGAACTACGACAAACTAACAGGGGTCCTGCTACATACGATAGATAATCATGTTCCAAGTAGTGGACCATTTTTCTGCGTCGTCTGCGAGAAGGATTGTGAGAGTCACCGGGAACTCAGGGCACACGTGAAAACGCACACTGGTCAATATCCATATTCATGCTTCATTTGCAACAAGGCTTATACAATGAAAAGGTATTTAAAGAGGCATATGGTCTGCCATACGGACTTCCCAAGACATCGCTGTCCCAAATGTGGACACAGGTTCAAAACAAAATCTGAACTGGAGACCCACGTCACGACGCACATACGCGGTGCACCGTATGCCTGTAGTCAATGTCCTCGGGTGTTCAATCACAAAGGCAATTACAAGAGACATCTAATAACACATTTGGACCCTCAAGGACTGCATTTGCCCAAGTACCCTTGCAAAGTATGCGGCAAGCGGTTCTTGAATAATCGAACTCTGGAGACACATATGCGCGTGCACACTGGCGAGAAGCCATTCAAGTGCGAAGTGTGTGGCAGATCCTTCTCCCAACAGGGCAATCTTCTAAACCACGTGAGGATACACTCGAATCCGCGGAGTTATACTTGCGAAGTTTGTGGTAAACGATTCAACCAGAGGGCGACATTGAGAGATCACAGTCTTCTGCATACTGGCGAGAAACCTTATGTCTGCAATGTATGTGGTGTTGCGTTCACATTCAGCGCAGCACTCAGGCGACACATGTGGACACATTCGGGCGGGAAACCCTTCGGCTGTGAGGTTTGTAGCGCTAGGTTCGTTGGTAAGTACGACCTGAGAAGACACATGAGGGTTCACTCGGACAGGCCGCGggggaagagaaggaaaaatGCGGCAACCGATCCTCAAACGGACCTCATAGAGGATCAGAAGGAAATAAAGGTTGAGCAGTTGGAGGGGAAGGAGGAACATACTGTTCAAATCCCGAACACAGAGACAGTTCTCATTGAGCAAGTCCTTCTAACGCAGGATGTGACCCAAGTTGTGCAGCAACAAGAATCGGAGAAGGAGAACGTCGACGCTCTTTTTAACTTGATACAGTATGGTTAA
- Protein Sequence
- MSWEISCADMCRACMKVDGVLLPMYDDDTISRKNLPVKLAELTSVRIDQFDGLPNKLCAKCAYRTDAFYDFRLQVQATEKKLKKMFETRIKPGSKEEESIENGYERKTSSSEPAELRSVDSKFDNNSLNSVEPFEQSLSEMITANGVGEQALEIDVSELVQANGEIDKNDLRLRNMIISKMQELEGKDLSNGIPDELSKLLESQNLDYTIMYIPESDIDVLDQENGEGNLVFKTDSLEETSDIKEMQELVSKDDVIDKEEQEVEYLHMEDEEDAQAVKDFNENGSWEPGFSERTLSKDLSHQNGYNGSTLNQQNDCDTSDSDYFVDPKDNILGSLNDTITRIKEIKIEGDVTQFQCTLCLQNYDKLTGVLLHTIDNHVPSSGPFFCVVCEKDCESHRELRAHVKTHTGQYPYSCFICNKAYTMKRYLKRHMVCHTDFPRHRCPKCGHRFKTKSELETHVTTHIRGAPYACSQCPRVFNHKGNYKRHLITHLDPQGLHLPKYPCKVCGKRFLNNRTLETHMRVHTGEKPFKCEVCGRSFSQQGNLLNHVRIHSNPRSYTCEVCGKRFNQRATLRDHSLLHTGEKPYVCNVCGVAFTFSAALRRHMWTHSGGKPFGCEVCSARFVGKYDLRRHMRVHSDRPRGKRRKNAATDPQTDLIEDQKEIKVEQLEGKEEHTVQIPNTETVLIEQVLLTQDVTQVVQQQESEKENVDALFNLIQYG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00391492;
- 90% Identity
- -
- 80% Identity
- -