Ecav006508.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ectemnius cavifrons
Gene Symbol
Znf711
Assembly
GCA_964023945.1
Location
OZ030378.1:12018706-12022884[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 1.2e-05 0.0011 19.4 0.2 2 23 172 194 171 194 0.96
2 16 0.00062 0.055 14.0 1.4 1 23 198 220 198 220 0.98
3 16 0.00027 0.024 15.2 2.1 1 23 257 280 257 280 0.97
4 16 1.9 1.7e+02 3.0 0.2 3 11 287 295 285 298 0.86
5 16 0.00018 0.016 15.7 2.4 1 23 315 337 315 337 0.97
6 16 0.00017 0.015 15.8 0.3 2 23 342 364 341 364 0.96
7 16 6.2e-06 0.00056 20.3 1.4 1 23 397 419 397 419 0.99
8 16 5.7e-05 0.0051 17.3 7.8 1 23 629 651 629 651 0.97
9 16 1.7e-05 0.0015 18.9 2.0 1 23 657 679 657 679 0.98
10 16 0.75 68 4.3 1.9 1 23 686 709 686 709 0.94
11 16 1.3e-05 0.0012 19.3 1.5 1 23 715 737 715 737 0.97
12 16 0.86 77 4.1 3.9 2 20 743 761 742 765 0.82
13 16 0.00011 0.0095 16.4 2.8 1 23 772 794 772 794 0.93
14 16 1e-06 9.3e-05 22.7 1.2 1 23 798 820 798 820 0.99
15 16 0.03 2.7 8.7 1.1 1 23 826 848 826 848 0.94
16 16 4.6e-06 0.00041 20.7 0.6 1 23 854 876 854 876 0.99

Sequence Information

Coding Sequence
ATGAAAGTTGGTGAGCGAATCACAGACGGTGTACGTTATAAGTGGATGTTCTGCTTAATTAAGTATCAATGTGCAAAGCCTCGCCGGAAAGGGGTGATAGTGCAAGACGACACGGGAAGATTACGCCTAGTCCTTATACGATCTAAGGACGCGGATGACATTAAGACCAAGCGAAGAAAACTAGAGAACGGTTTCGAAGAATTAAAAGCAGAATCTGCTGAAGATGGGAACAATGAGGAGAATGAAGAACTCCAATTGAAGCCTAAGAAACCCCcacaaattataattaaaacacTGAAGCCACTGCCCCAGAAACTAGCATCGCAATATCTCGTGTCCACACAACCCCTGAAAAAAGTAACCGTTTTCCAAAGTGTCTTGAAGAATACCACCTTGCCTATTACTGACATTAAAACTCTCAAAAGTGAAAAGCACGACGGAGACTGGAATAAGTCGCCGACGTTGGAGGCGATCGAGGACGACGTGGATGAAATTCTCAATTCACTGCAAACTACTTGCCCGATCTGTGAGAAAGTGTTCGACACTCCGAACAAACTGAACAGTCACGTGAAAAAGGCACACCGTCCGCCGTACAAATGTAATCAATGCGACGAAGTGTTTCATACCGAGGAGCGTTTGGAGCTGCACAAAGCGACACACCAGCAGGAGCGAGTCTTCGAGTGTGATATTTGTCATATGAAGTGGAGACTAGAAAAGAGTATGAAGAACCACAAGTTACGCTGTCATAGTGAGGAAAATGCAGCGACATACATGTGTGAATATTGTGGTAAGAGCTATCATTTGGAGAAGGACTTAGAATATCATATAAAGAGGAGTCACGAACGCAAGCTGGATATATGCAGGTACTGCGGTAAGAGTGTGAAGAGCATTAGAGGGCACGAATGGCGACATCAGCAGCAGAACGGTAATGCACAGACAGTTTACCCTTGCCACTTGTGTCGAAAGAAATTCTATGATCAAGATAGATTAGCCCGGCACTTGGTGCGACATGAAAACGGCTTAAAATGCGAAGATTGCGGTAAAGTGTATCCAGGGAAGCAGGAACTGGGCAATCACAGGCGATACAAGCACAGCCTGTCGAACTTCTTGAAGTGCATCGTTTGCGAGAAGACCTTTGCCGTAGGATACTTCTATTTGCATGTGCTTACGCATGCCGGCATACGACCATACAAGTGTGATATTTGTGAGGAGGACTTCACACAACGAACGAGCTTGCTGAGACATAGAAGGCAGCATCCTGGCCCTTTGCCACCGGAACCACCGAGTCAGCCCCAAATTGTCTACCAAGCAAAACGATACTTACAAGAGCTGGAAAACAGTCGAATGCTCGAAAGTTTAGctaatgaagaagaagagaaggaagatgaTACGGATAACGTTACGATGATCGAGGAAGATACAACAATGGAACAGGATTCGACTTTAGAACAGGACATAAAAGTGGAAACAGTGGCAGACATTATAGTGGAAGAAGATACGATAATTGATCATGATATTTCGTACGCACTAGACCCGCTCGCGCCGACATTTCTGATAGTAAAGGTCGAAGATGATTACTTTCGGATACCAAAGTCACTGAGCGTCTTCATGATGAAGGAGCCTGCACCTGGCGAACAGAAGCAAAGTAAATCGACCAAGGGTAAAACTGCTAAGAAAGCAAAGGAGAAACAAGCTGCCACGCATGTACCAAGTGAAGAGGAAAAGAGTGCGGAAGAGAGCTCTACCAGGGATGACGATGTCATTCTGGACGATGACGACGATCTCGACGAAATTGATGATACACCGTTAGACTTTAGGAAGCGGCAGGAGCAGGAACGTGGcaaggaaaagagaagagcAAGCAAAGCTCGAACAAAGAAGAAGCATACCTGCGAGATATGTGGCAAGTCGTTCGATCGGAAGTGTAAGTTCACAAGGCACATGTTCAAGCACAGTGATTCGAGACCGCACAAATGTACGGTCTGCTTGAAGGCATTTAAGACTGGATCTTACTTAACGCGGCACATGGAAATCCACGATGAACCGACAAACCTTCACGCCTGTTCCCTCTGCGACTTCAAGGCACGCGCCAAGACATACCTAAAGATACATTATATACGCAAGCATACGGAAGATTATAATTTCAGCTGCGAACGGTGTGGTAAGATGTTTAAGGTGCAATCGGACTACACGACTCACTTGAAAGATCACGACGCAGAGTCATGCGTGTGCGACATATGCGGCTCTTCTTATCCCAGCAAAAGTTCCCTGTACTTTCACAAACACTACAAGCACAAGACTCAGGTGAAGGAGTTCGAGTGCCAAACCTGCCATAAGAAGTTCAAAACGCAAAAGAATCTGGACGCCCACGGTGAGCTGCACAAGATGAAGTATGTGTGCGAGCAGTGCGGCATGGAGTTCAAGTTCAAGTACGGCTTGACGAAGCATCTGCGCACACATTCCGGTGAAAAGTCTTATCTCTGTGCGATTTGCGGTAAAACCTTCGGCTGCCTAAGCTCACAGAAGATTCACTTGCTTACTCACGTGGGTGAACGACCGTATGTGTGTGATATCTGCGGGCAGAGTTTCACCCAGAGATCGCCGATGATGCTACATAGAAGGAAGCACCCCGGCTCGCATCCTCCTCCGCCGCCAATCAAAATTACGAACCTGCTTCACGGAGTCCAGGACAAAATCATTGTGAACAAAACTACTAAATAA
Protein Sequence
MKVGERITDGVRYKWMFCLIKYQCAKPRRKGVIVQDDTGRLRLVLIRSKDADDIKTKRRKLENGFEELKAESAEDGNNEENEELQLKPKKPPQIIIKTLKPLPQKLASQYLVSTQPLKKVTVFQSVLKNTTLPITDIKTLKSEKHDGDWNKSPTLEAIEDDVDEILNSLQTTCPICEKVFDTPNKLNSHVKKAHRPPYKCNQCDEVFHTEERLELHKATHQQERVFECDICHMKWRLEKSMKNHKLRCHSEENAATYMCEYCGKSYHLEKDLEYHIKRSHERKLDICRYCGKSVKSIRGHEWRHQQQNGNAQTVYPCHLCRKKFYDQDRLARHLVRHENGLKCEDCGKVYPGKQELGNHRRYKHSLSNFLKCIVCEKTFAVGYFYLHVLTHAGIRPYKCDICEEDFTQRTSLLRHRRQHPGPLPPEPPSQPQIVYQAKRYLQELENSRMLESLANEEEEKEDDTDNVTMIEEDTTMEQDSTLEQDIKVETVADIIVEEDTIIDHDISYALDPLAPTFLIVKVEDDYFRIPKSLSVFMMKEPAPGEQKQSKSTKGKTAKKAKEKQAATHVPSEEEKSAEESSTRDDDVILDDDDDLDEIDDTPLDFRKRQEQERGKEKRRASKARTKKKHTCEICGKSFDRKCKFTRHMFKHSDSRPHKCTVCLKAFKTGSYLTRHMEIHDEPTNLHACSLCDFKARAKTYLKIHYIRKHTEDYNFSCERCGKMFKVQSDYTTHLKDHDAESCVCDICGSSYPSKSSLYFHKHYKHKTQVKEFECQTCHKKFKTQKNLDAHGELHKMKYVCEQCGMEFKFKYGLTKHLRTHSGEKSYLCAICGKTFGCLSSQKIHLLTHVGERPYVCDICGQSFTQRSPMMLHRRKHPGSHPPPPPIKITNLLHGVQDKIIVNKTTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
-
80% Identity
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