Ecav004272.1
Basic Information
- Insect
- Ectemnius cavifrons
- Gene Symbol
- -
- Assembly
- GCA_964023945.1
- Location
- OZ030376.1:20349125-20353909[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.013 1.2 9.8 2.3 1 23 396 418 396 418 0.96 2 18 0.03 2.7 8.7 0.6 2 23 455 476 454 476 0.95 3 18 0.00057 0.051 14.1 2.5 1 23 596 618 596 618 0.98 4 18 0.0021 0.19 12.3 1.1 2 23 622 643 621 643 0.96 5 18 2.7e-05 0.0024 18.3 0.8 1 23 738 761 738 761 0.94 6 18 0.0002 0.018 15.6 0.5 1 21 767 787 767 791 0.92 7 18 0.00018 0.016 15.7 1.7 2 23 868 889 867 889 0.95 8 18 0.00033 0.03 14.9 3.9 1 23 992 1014 992 1014 0.96 9 18 0.00029 0.026 15.0 0.7 1 20 1019 1038 1019 1040 0.94 10 18 0.00084 0.075 13.6 0.4 2 23 1051 1072 1051 1072 0.97 11 18 3e-05 0.0027 18.2 0.6 2 23 1111 1132 1110 1132 0.97 12 18 2.7e-05 0.0024 18.3 1.6 1 23 1137 1159 1137 1159 0.95 13 18 0.00011 0.0099 16.4 2.8 1 23 1165 1187 1165 1187 0.98 14 18 4.8e-06 0.00043 20.7 0.4 1 23 1203 1225 1203 1225 0.95 15 18 3.9e-07 3.5e-05 24.1 0.6 1 23 1231 1253 1231 1253 0.99 16 18 4.2e-05 0.0038 17.7 0.2 1 23 1259 1281 1259 1281 0.97 17 18 0.00016 0.014 15.9 4.1 1 23 1287 1309 1287 1309 0.96 18 18 0.011 0.99 10.1 0.4 1 20 1315 1334 1315 1336 0.89
Sequence Information
- Coding Sequence
- ATGGACGCCATCGAAATAGAACCATCGGATAATTCAGAGCACGAAGAACATGGGATTGTATCGACCGTTGAGATATGCCGCGTCTGCCTGCTAGATAACTTGGCGATGCGCGATCTCTTCCTCGAGAATGGGGCTGCATCGCTTTCGGCGAAGGCGATGAGCTTTGCTAACGTCAAGATGTCACCCGGCGATGGCTTACCAGGCCAAGTctgttgtatgtgtgtggaaAAATTAGAATCCGCGTATGAGTTCAAGCTTCAAGTGGAACATGCGGATACTATTCTCAGAGAGAGATTCTTGACCATGAATATGAAGGAAGAGCTATTCTTTAATGAAGTCGAAGTACACCTGGAATCAGACAGGCAGGAAAATAGTGAAGAAATGCCAATGGACGCAGCACATTATCAAGCTATGACAGCTAGTTTGACAGCCGCAGTCTCGGACCATGCGTGTTCTGCGATGAAGGATACTAGTCTAACATTGATACCAATTGGCAAGGTGGATCAGTTGGAACAGCGTGTAGCAGAACAGGAGAGTGGGCCAACCTCAAGCACGAAGATCGAATCCACTTCTGACGGGGAGGGATTGCATTTTCTCGAGGAAAGCAATGCCGAACAGAAAGTTCAGGGGCAGTTGCACATGCCTACGATGATGGCGGAGAACATGGAAGAAAGGCCTGGAGAAACAACAGCGTGCATGTCCATAAATGTGTCTTTAAAGCGTGAAAGAGAAGCCGATATCATTGGACCAGAAGAACATGATTACATCTTACAAACCAGCTCTTTAATGGCTGGCAGTGCGGAGGTTTCCATTACTGGGTGCGAATCTGATGCCGCTACTGTAAACTCAGATGCAGCTCACACAGGCCACGTTTTCAATGAACCAGCTCTACGCGATGAAGAAAGAACCAGTGAATCCAATGAACAATCGGCTGGATTTCCAGCAACAGAAGTGAACAATAGCCATAATGAATGCGAGAGATCGCTCACAGCTGATAATGAGCTGCCGCACGCAGAGGACGAAACCTCGCAAGTGCAGATGCGGAGAAGCAAGCGTAATTTGAGCCGAAAGAGCGGCACCGATGATAACGACTCGATCGAAGAGAATTACTTTGAAAACTTAAATCTTAGTTCGCGTTTGAAGAAGGCCCAGATAGAGCAGGCAGACAATAACGACAAGGTTTTTTTCGCCTGTTACCTGTGTGACAAGCAGTTCCTCACAAAGGATCTATTGAAAGAACATTTACACTCCCATGAGGAAGTTAGGAAAACATTGTTGTTGAAGAAGGCACCGGAGAAAAGCCAGAAACCCATCAGTGACAGCAACCCCCACAGTATGCCGCCATCCGGCAGAAAAGCCAATAAGTGCCCTTATTGCGGAAAGGAATATCTATACATAATATCCTTCAACAAACATTTGAAGCAAcacgaaagagaaaaggaggaagatGGGAAGGATGCAACAATGCCGCTGGAAGTGTCACTTGAAGAAGATGAGCAAAGCTTCGGCATTGAGGACGATTACAGTAGTAGAAGGAAATCGATAGCAGACGgtaggaagagaaggaggagataTCAAAGTCCAACTGAGGATAATACCGAAAGCAAGGTGGAAGACGAGGAAAGAGTAATCGCGAGAGGAGGCGATCAAGAAGACAAGGGAAAAAAGGTGTGTCGAGATGAAGATGACAAGGAAGATGCTGCATTCGATGAAAGAGCACCCAGTGAAGAGAGTGATAGGCTTGATGGCGGGAAACAGTGGCGCAAGCGTTGCCGCATCGGCGATTTTGAGTGCGATAAGTGCTCAGACACATTTTCTAATAAAAGAGATTTTAGAAAGCACGCAAATACACATCTTAGTCTGAGGTGCAGCGTATGTCAAGAAGAGTTTGATACGCTGGAGAAGCTTAGGAATCATCGTACAAAGCATGTTCTAGAAGGTGTCCTGACTGAGCAAGATCTTGAAGAAAGCGCTAAACTTAGCAAGTCCGATGCATATGTTGAGCAGAgcaagaaagaggaggaggaggaggaggaagaggaggacggGGAGGACGAAGAGGGGGGAGCGATTACTTTGAGCCCCAATGCAATCGTTGCCAGCGACGATAACGAAGACAGTGATTACCACGACAACTTCAATACCAATGGTGGTTTGGCGCGAGCTTTTCACAGGAACAGAAAGGGCGGCGAATTACGTTCAGGGAGCCATTACAATTGTAAGTTGTGCGACCAACGATTCGCAAGAAGGGAGCTGCTGCAGCGGCATATCGACCAGCAGCATCCGCAGATCAAAGCGTACAAGTGTACGGAGTGCAATAAATCCTTTGGTAACGAGCTTACTCTACGAAATCATCTTATCGCAACTAACCATAAGACATTTGTGCACGGCCAAGAATACGATCCAAATAAACGCATTAAACGCGTTGCTGCGAGAGCTGCTCAGAGAATCATAGACAAAATAAAAACGGAAGACGGTCTCGAAGAGTTAGAAGAGGATGAAGACAACGAGGGTGGCCTGTGTAGCGACTTGGAAAGGAGCATGTACGGGCGACGAAGGGAAGCCACCGCACAGAGAAGAACGTATGCAAAGAAGGAATTGGAATGCGCAAACTGCGGGAAAAGATGTAGTTCAAAGCAGGCTTTAAGTAAACACATGGAGCAGCATACGAAAGAAGAGAGGATGGAAAAATTGGAGAAACCAAAGAAGTTCAACGTAGATAGGAAAGATAGTACTCTGCAAAAGAATCAGAGAACCTCGGTTACATCTGCGAATAAAGACGGCAGTGCTgagagcgaaagagggagTGCTGGAAATCATGTACGTATGGCTGCTACCGGTAACGGCGCTGGTAGctgtggcggcggtggtagcgGCGCCGTCGtcggaggaggtggaggtgcCGTTGGTGCCGCTGATCCCGATGACGATGATTCGGACTTTGAAAGTGGTTTAGATTGGCCAATGGATAACCATGAGTGTGCAACGTGTAAAAAGAGGTATAGTACGAAAAAGTCTTTATTAAGGCACCAATTGCTTCACGAGGAACCAAACTTCGAATGTGACATTTGTAACGTTAAGTTCTATCGAAAAGACAAACTGAAGGCTCATTATGACAAGTGCTCGGAAAAAAATCCAGATCAAGTGAGAAAGTGCAATATTTGTGGTGATAGTttcgagaataatgaaatgTTGAGGGAACACAGAGCAAAACATGTGACCGAAGGCATTTTGACGGAAGAAGACTTGCGCGACATCGAACCGCGTCCCGAAGAAAAGAGGCAAGGGGAAAGGGTCGGCAGAAAGAGACGAACCGACATCGTTGGCCTGGAATGCACCGAGTGTAACAAGCAATACACCTCTCGAAAGGGATTGCTGCGGCATATTCAAGTTCACGAAGGTAAAAAGTATCTGTGCGATATATGTCCAAAGAAGTTTTATAGACGGGAGCATCTCAAGATACATGTCGCTAAGCACAATATGATCAAACCATACAAGTGCAATCGGTGCACAAAACGGTTCATTAAGGAGGAACAGCTGACCAACCACTTATCTAAACACGACCGCACTTTTAAGAAGAACAAAGAAACGGACAGCACAAAACGATTTCTTTGCGAGATCTGTTCAAAGAGCTTTACACAGTCGACAACGTTAATTGCTCATTTACGGGCTCACAACGGCATAAAACCATATGTGTGTGAAGTTTGCTCACGGCCCTTTACGACGAACGCCTATTTGAAAATGCATATGAGAACACATACACAGGAGCGACCATACATCTGTCAGTATTGCTCACGTGCATTCGCGAGAGCAGACACGCTCGCCAATCATTTAACGTCCCACACAGGCGAGGCCAAGTATCACTGCAAATATTGCCCAAAGAACTTTCGCCGCTTGAAATCGCTCAAAGAGCACGTTTTCATTCACACCGGACAAAGGCCATATGCATGCCCGACTTGTGATCGCAGGTTTAATAATAATGGTAGCCGATATGCTCATAGCAAGCGATGCAAACAGAATTTTGCACAGAATCAGAATCGGGCCCAAAACATGGTTTCAGCGCCACTGCAAACGATAAATCAGCATCAAAATCCAAATCAGCAGAGGCTGCAGCAGCCCACGATAACAACCAATCAAATAGTTAAGACGCAAAATATTAAGACCATTGCAATTGCAAGGCAGCCGGATCCTATATCGACACAGCAGGTCATGCAGCATCAGGAAATACTGATGCCCCTTATTTTCGAAATCTTGCCAGAGGGTACAAAAATATTCACGACTACTTAG
- Protein Sequence
- MDAIEIEPSDNSEHEEHGIVSTVEICRVCLLDNLAMRDLFLENGAASLSAKAMSFANVKMSPGDGLPGQVCCMCVEKLESAYEFKLQVEHADTILRERFLTMNMKEELFFNEVEVHLESDRQENSEEMPMDAAHYQAMTASLTAAVSDHACSAMKDTSLTLIPIGKVDQLEQRVAEQESGPTSSTKIESTSDGEGLHFLEESNAEQKVQGQLHMPTMMAENMEERPGETTACMSINVSLKREREADIIGPEEHDYILQTSSLMAGSAEVSITGCESDAATVNSDAAHTGHVFNEPALRDEERTSESNEQSAGFPATEVNNSHNECERSLTADNELPHAEDETSQVQMRRSKRNLSRKSGTDDNDSIEENYFENLNLSSRLKKAQIEQADNNDKVFFACYLCDKQFLTKDLLKEHLHSHEEVRKTLLLKKAPEKSQKPISDSNPHSMPPSGRKANKCPYCGKEYLYIISFNKHLKQHEREKEEDGKDATMPLEVSLEEDEQSFGIEDDYSSRRKSIADGRKRRRRYQSPTEDNTESKVEDEERVIARGGDQEDKGKKVCRDEDDKEDAAFDERAPSEESDRLDGGKQWRKRCRIGDFECDKCSDTFSNKRDFRKHANTHLSLRCSVCQEEFDTLEKLRNHRTKHVLEGVLTEQDLEESAKLSKSDAYVEQSKKEEEEEEEEEDGEDEEGGAITLSPNAIVASDDNEDSDYHDNFNTNGGLARAFHRNRKGGELRSGSHYNCKLCDQRFARRELLQRHIDQQHPQIKAYKCTECNKSFGNELTLRNHLIATNHKTFVHGQEYDPNKRIKRVAARAAQRIIDKIKTEDGLEELEEDEDNEGGLCSDLERSMYGRRREATAQRRTYAKKELECANCGKRCSSKQALSKHMEQHTKEERMEKLEKPKKFNVDRKDSTLQKNQRTSVTSANKDGSAESERGSAGNHVRMAATGNGAGSCGGGGSGAVVGGGGGAVGAADPDDDDSDFESGLDWPMDNHECATCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEMLREHRAKHVTEGILTEEDLRDIEPRPEEKRQGERVGRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCNRCTKRFIKEEQLTNHLSKHDRTFKKNKETDSTKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNFAQNQNRAQNMVSAPLQTINQHQNPNQQRLQQPTITTNQIVKTQNIKTIAIARQPDPISTQQVMQHQEILMPLIFEILPEGTKIFTTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -