Basic Information

Gene Symbol
ZNF236
Assembly
GCA_964023945.1
Location
OZ030387.1:10960457-10967211[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 26 4.8e-05 0.0043 17.5 2.9 2 23 169 190 168 190 0.96
2 26 3e-05 0.0027 18.1 0.5 1 23 196 218 196 218 0.98
3 26 1.7e-05 0.0015 18.9 1.2 2 23 224 245 224 245 0.97
4 26 0.019 1.7 9.3 0.1 3 23 253 273 251 273 0.96
5 26 6.8e-05 0.0061 17.0 1.0 2 23 284 305 284 305 0.98
6 26 7e-07 6.2e-05 23.3 1.1 1 23 326 348 326 348 0.99
7 26 3e-06 0.00026 21.3 0.7 1 20 354 373 354 376 0.95
8 26 1.2e-05 0.0011 19.4 0.7 1 23 382 405 382 405 0.96
9 26 0.0012 0.11 13.1 2.0 1 23 414 437 414 437 0.97
10 26 1.9e-06 0.00017 21.9 1.9 1 23 571 593 571 593 0.98
11 26 0.00034 0.031 14.8 3.4 1 23 599 621 599 621 0.99
12 26 0.11 10 6.9 2.1 1 23 627 649 627 650 0.94
13 26 0.0024 0.22 12.1 7.0 1 23 729 751 729 751 0.98
14 26 3.2e-05 0.0028 18.1 5.1 1 23 757 779 757 779 0.99
15 26 7.3e-06 0.00065 20.1 1.8 1 23 785 807 785 807 0.98
16 26 0.00038 0.034 14.7 7.6 1 23 813 835 813 835 0.98
17 26 0.05 4.5 8.0 1.8 2 23 1171 1192 1170 1192 0.97
18 26 0.00058 0.052 14.1 0.8 1 23 1198 1220 1198 1220 0.98
19 26 0.0017 0.15 12.7 0.3 2 23 1227 1248 1226 1248 0.95
20 26 6.8e-07 6.1e-05 23.3 1.9 2 23 1320 1341 1320 1341 0.98
21 26 0.00064 0.057 14.0 2.8 1 23 1347 1369 1347 1369 0.99
22 26 0.00023 0.021 15.4 1.9 1 23 1375 1397 1375 1397 0.98
23 26 7e-05 0.0063 17.0 2.2 1 23 1403 1425 1403 1425 0.98
24 26 2.3e-05 0.0021 18.5 0.5 2 23 1625 1646 1624 1646 0.97
25 26 1.3e-05 0.0011 19.3 4.5 1 23 1652 1674 1652 1674 0.98
26 26 5.1e-05 0.0046 17.4 6.2 1 23 1680 1703 1680 1703 0.96

Sequence Information

Coding Sequence
ATGTTAACTCGACAGACTGTCTTGGGTGAGGGTGCGTGCATCGAGAGCGTGCCAACAATCGGCTTCGTCACTACTGAGGATGGCCGCACACTTGTCGCACTCACCGAACACGATGATAGTCTCCTCGAGATTATGGCAGCCCCCATGACTTTGATCACTCAGAATCCTGCTACCACAGCACCTGTCTTCAAGAGTATCGATGGAAATCTAATACTAAATCCTCCTGTCTTTCAAATTAATGTGGAAGGCATGAGTAGCAACGGAGTTCAAAGGACTTTATTGCTACCCACACAGCCGATAGATACTGGCTGTAACATATTGGAACAGCCACAATCAATACAGCAGGGTGCACCAACTTTAGCAGGGGATTTCTCCACCTTTGGTCTTGAGAATGCAACGgagattaatattaatgtacaAGATAGTGCTTCGGCAGTTACGAATAAGAGTGTTCAAAAGAAGACTCCTGGTAGACCAAAGAAAAATGAGCTGAAGGAATGTCTAAAGTGTGATATATGCGACCGAGAATTCACAAAACAATCGTTATATCGCAAGCACATGGATCACCATGCCGAGGAGAAACCGCATCGATGTCCAAAATGTCCTGCATCCTTTAATATTCCGTCAAACTTTACTCTACATATGGCCACGCATAATACGGGTGATCCTAAGTGTCCGGAGTGCGGAAGAAAATTTGCACGAATGGCCAGTTTGAAATCTCACATGATCCACCATGAAAAGGAGGAGAATCTTTTCTGCACCGAATGCGAAGACGCATTTGCGACTAAAGCTCAATTAGACGCACACTTAAAACTTCACGGGGAAAAATGGTCATCCGACGAAGCGCGGAAGTGTAAACTTTGCAATAAGCAATTTACTCAGCCAGCCCTGTATCGGCTTCACATACGCGAGCATTATAGACTGCAGACCAGAGTAACTAAGCAGACAAAGAGGGGTGCAAAACATAAAACAATGTACAAGTGCACTATTTGCTTAAAGTCTTTCCAGAAGCCAAGTCAATTAATGCGTCATATTAGAGTGCATACAGGAGAGAAACCTTTTAAGTGTACCATATGTGGACGAGCATTCACGCAAAAGAGCTCGTTACAAATCCATACCTGGCAGCATAATGGGATCAGGCCACATACCTGCGAGCTTTGCAACGCAAAGTTTAGTCAAAAAGGTAATCTGAATGCTCATATATTGAGAGTTCATAATGCACCAGAGGGTGAGCCGATATATGCCTGCACCTATTGCTCGTGTGTTTTTAAAAAACTGGGTAGTCTGAACGGCCACATAAAGAGAATGCACACAAACATGAATGGGGAAACTGTCGAAAGAAACGAGGAAATGCTGACCGAGGCCGACATGAGGGCGACGGTAGATAGTGTTATATCACAATTGGCTTCCCTGGAATCTACTACTAATCCAGGCATTAATGCCACTCCAAATCCAACCGTTGTTACAAATAGCAACACAGCCAGTATAATTAATTTGGAGAATGGAAATTCGACGATTATCGTGTTGAGAGATGATATTCTACAGCAGGCCCTTGACAAGAGTGGTCTGTCGCCTAAGAAAAATGCAGCAACCCCTCAAACGAAAGTCGAGGCTCGAACCAATTTTGTCACATTATTGGATCGTTCGCCGGACGGTGGTACAGGAAAGTATCTTACAATTAAACAGCGTTGTATAGGTAATGTAAGGTGGTATGCGTGCTCATTCTGTCATAAGGAATTTAAAAAGCCTTCAGATTTGATCCGGCACCTACGAGTGCACACTCAGGAAAAGCCATTCAAGTGTACACATTGTTTTCGATCATTCGCCCTCAAGTCAACTATGATAGCCCACGAACGGACACATACCGGCACAAAAAAATATGCTTGTAGTTCGTGCGAGAAAACATTCGCTTGTTATGGCAGCCTTGTTGCACATACTAGGGCACATCACGGGGATAAAAACGGGTCCAGTGAGGGTGGTGGGAAATGCAGTGATAGTAGCAAAAGTCAAACTAAAAGTTCAAAGTCGAAGTCGAAGTTGTCACCAGAAGCCGAAAACCTAGCGCAGGATCTTGTTCTACAGGAGCCTTTAGTTATTAGTGATCTTGGTAATAGAATTTGCGTGGCGCAAGTAGCGTCGAAACAGAAACAAGTGTACGATGAGAAATCGGACGTGGCGAGACCGCATAAGTGTTGGGTTTGCCACGCTGCCTTTAGAAAAATTAGCCACCTGAAACAGCATTATCGTCGACATACAGGGGAAAGGCCATACAAATGTACAAAGTGTGATAGGAGGTTCACCTCGAACAGTGTGCTCAAGTCACACCTACATACACATGAGGACTTGAGGCCATTCAGCTGCTCTGTATGTGACACGAAATTCTCGACACAAAGTAGTATGAAAAGACATTTAGTTACCCACAGTACCCGGCGTCCATTCATGTGTCCGTACTGTCACAAGACTTTCAAGACTTATGTGAATTGTCGCAAGCACATGAAGATACACAAGCATGAATTAGCACAGCGGCAACTGGAGCAACAGAAAACACAAGATGAAGGTGGACAAGAAATAACATTAAACGTAGAAGTAAGCACCGCACCGTCAGTACTGTCAGAGAACCTTGGATTATCTGAAGAAATGGACATGTCTTTTCAACCGCGGATAGAAAATGTGTTTTCGCAAAATCTTAGTGATCATCTACAGGATATCGTGGAGCCGAAGGACAAATCAGTTCTAACAACAAATAGGGTCGATGCAGCGATGAATACTCATATCGCGGAAAATTTGCATGACGTAGATACGACAGCCGTGACAAACTCTCAAATGCTACATGCCGATGAGAGGGGTGCTGTAACATTGCCAGGGTACTCGGGAGATCAAACTCTCACACCCGAAAGCATACGGGAAATCGAGGAAACTTTGAACCAGCAACTCTTCAACATCGGAATGAACTTGGGTCTAGGAGCTAATTTGTCCAGACAGATAGACGAAAGCAATGCGACTGCTCTAGATACTTCGAGAGACCAACCTACATTAACAGTTCCATATGAAACCACTAAGGACATTGAAACTGCACCGAGCAATGTGTTTACATCCCAATTCGATTCCTTTGATATGAGCCAAATAACACTGCAGCCGGACGTTGAGATTGATATCGGACTGGTCGATGCAGCCAATACCACGAGTATGGCAAGTATCCTTCCAAAATCAGCAAAGGAAGAAGAGCGTCTAATTGCTGTTACGTCGGTTACGTCCGAGCCGCAAACGCCCAATGTAAAGACATCTGTAGCAGTCTCTACATTGACGGAGGACACCCACGAGACATTATCGCTCCAAGAAAATGGCACAAATCCGACAAATGAAGTTCCCATGCCACTCGCCAATACTTATTGGGAAAATTTCTCAAGTGCGTCAGTACCAAAGGCTCAGAGCGATACACAGGAAGCGTCGCCATCGGAGCATACCAATAGCAATGGAAATGAATCTACAAAATTATCGGAATCCCTCTTGCAATGTCACTTGTGCAGTAAACGTGGGTTTACTACTGGGGGATTAAAGGAACATTTAAAGATGCACCGCAGCACCAAGGAATTCCAATGTTTAGAATGTCCTTTGAGATTTTACACCTACGGCGGATTAAATAGGCATTCGAAAATGCACGTTAATAAACCGCCGTGGGAGTGCCCTATATGCCATAAAATTGCTGCTAGCAAATCggaattaaaattacataGTAAAGAGCACGAAGATACTTTGGCATTGTCATCCCAGGACGAGAATATTGAGATAGAAGAATCGGTCAGTGAACTTGCACCTGTCAGTCCGTCAAATGAAGCTGAAGTAGAGCCCGACTCCTCGATATCCGAAAAGGTGCTCATGGACGCAGTAGCGGAGAAGGAGGTAATGGAAAGACTAAATTGCATACCAGAGAAAAAAGAGCAGAAAGAGTACACAAACAGATGTAGATATTGTCCAAAAACTTTTCGAAAACCTAGTGATCTTATAAGGCATACTCGCACTCATACCGGCGAACGTCCGTATAAGTGTGATTTCTGCAGTAAAAGTTTTGCAGTAAAGTGCACTTTGGATTCTCATATAAAAGTGCACACTGGCAAAAGGACATTCCGTTGTCATGTTTGCAGCAGTCTTTTTGCCACGAAGGGCAGCCTGAAGGTTCATATGAGATTACATACAGGTTCGAAGCCCTTCCGATGTCCAATTTGTGACTTGAGATTCCGAACTTCGGGGCACCGAAAAGTTCACTTATTGAAACATACGAGGCAGAGCAAAGGATCGAATCCGAAGCGAAAGCCGAAGAATTTCAAAGTTACAGCTGTAGCcgaggcagcagcagcagcgttaGAAAAATCCAAGGATTGTATTGAGAAAATAGTGAGCCTTCCAGCTGAGCAACAACTCGAAAGTGGAGAAAACGCGGATTATAGTAACCTGCAAGAGGTGATAGGTATCGAAGATCTGACTGGTCAGATTACCTTCAGCACCGAAGGtgcaatattaaataataattctgtGTTGTCGGTGAATGAAAGTAACCAGATAGTCGCGAACTTGCAATTCCTCCTTGCGAATGGTCTGGTGACTATTCAAACAGATGACACGCCTTTGCTATCGCAAAATACGGCCCCGGAAGCCACTGGAATCATATCAAATGATACAGTTACCTTTGCCGTTAGTGTGGCTGGCCCAGAACCAAGTACGCACATTGCAACTGCAAACAATAGTATACAACTGACCACTATCGCGCAGCCTATAACAATTCCTAGCATCTCTTTACTCCATGTGACAAAGGTTCCTGGTAAGCCAGAACGCCCGGCTGCTAAGGAAGCGACCAAGAGCAATTTCTCAAAAAAAGAATGTGATATTTGTGGGAAGACATTTATGAAGCCCTATCAAGTCGAGCGACACAAGAGGATACACACAGGCGAAAGACCGTACAAGTGTGACTTGTGTACGAAATCATTCGCACAGAAGTCTACTCTGCAGATGCATCAGAAGCATCATACGGGTGATCGGCCACACCATTGCCCGCACTGTGAATACTCATTCACCCAAAAGGGAAACCTTCGAACGCATGTGAAACGTGTGCACCGGCTGGATACATTGGATATAAAGAAACTAAGACGATCACGACAAAATTTCGCTCCGAAACCGATACAGGTCGCAGTTCCTGAGGCAAAGATTCTCACATTTGATGATATATCATTTGTCGAATTGTTAAAGTAG
Protein Sequence
MLTRQTVLGEGACIESVPTIGFVTTEDGRTLVALTEHDDSLLEIMAAPMTLITQNPATTAPVFKSIDGNLILNPPVFQINVEGMSSNGVQRTLLLPTQPIDTGCNILEQPQSIQQGAPTLAGDFSTFGLENATEININVQDSASAVTNKSVQKKTPGRPKKNELKECLKCDICDREFTKQSLYRKHMDHHAEEKPHRCPKCPASFNIPSNFTLHMATHNTGDPKCPECGRKFARMASLKSHMIHHEKEENLFCTECEDAFATKAQLDAHLKLHGEKWSSDEARKCKLCNKQFTQPALYRLHIREHYRLQTRVTKQTKRGAKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFKCTICGRAFTQKSSLQIHTWQHNGIRPHTCELCNAKFSQKGNLNAHILRVHNAPEGEPIYACTYCSCVFKKLGSLNGHIKRMHTNMNGETVERNEEMLTEADMRATVDSVISQLASLESTTNPGINATPNPTVVTNSNTASIINLENGNSTIIVLRDDILQQALDKSGLSPKKNAATPQTKVEARTNFVTLLDRSPDGGTGKYLTIKQRCIGNVRWYACSFCHKEFKKPSDLIRHLRVHTQEKPFKCTHCFRSFALKSTMIAHERTHTGTKKYACSSCEKTFACYGSLVAHTRAHHGDKNGSSEGGGKCSDSSKSQTKSSKSKSKLSPEAENLAQDLVLQEPLVISDLGNRICVAQVASKQKQVYDEKSDVARPHKCWVCHAAFRKISHLKQHYRRHTGERPYKCTKCDRRFTSNSVLKSHLHTHEDLRPFSCSVCDTKFSTQSSMKRHLVTHSTRRPFMCPYCHKTFKTYVNCRKHMKIHKHELAQRQLEQQKTQDEGGQEITLNVEVSTAPSVLSENLGLSEEMDMSFQPRIENVFSQNLSDHLQDIVEPKDKSVLTTNRVDAAMNTHIAENLHDVDTTAVTNSQMLHADERGAVTLPGYSGDQTLTPESIREIEETLNQQLFNIGMNLGLGANLSRQIDESNATALDTSRDQPTLTVPYETTKDIETAPSNVFTSQFDSFDMSQITLQPDVEIDIGLVDAANTTSMASILPKSAKEEERLIAVTSVTSEPQTPNVKTSVAVSTLTEDTHETLSLQENGTNPTNEVPMPLANTYWENFSSASVPKAQSDTQEASPSEHTNSNGNESTKLSESLLQCHLCSKRGFTTGGLKEHLKMHRSTKEFQCLECPLRFYTYGGLNRHSKMHVNKPPWECPICHKIAASKSELKLHSKEHEDTLALSSQDENIEIEESVSELAPVSPSNEAEVEPDSSISEKVLMDAVAEKEVMERLNCIPEKKEQKEYTNRCRYCPKTFRKPSDLIRHTRTHTGERPYKCDFCSKSFAVKCTLDSHIKVHTGKRTFRCHVCSSLFATKGSLKVHMRLHTGSKPFRCPICDLRFRTSGHRKVHLLKHTRQSKGSNPKRKPKNFKVTAVAEAAAAALEKSKDCIEKIVSLPAEQQLESGENADYSNLQEVIGIEDLTGQITFSTEGAILNNNSVLSVNESNQIVANLQFLLANGLVTIQTDDTPLLSQNTAPEATGIISNDTVTFAVSVAGPEPSTHIATANNSIQLTTIAQPITIPSISLLHVTKVPGKPERPAAKEATKSNFSKKECDICGKTFMKPYQVERHKRIHTGERPYKCDLCTKSFAQKSTLQMHQKHHTGDRPHHCPHCEYSFTQKGNLRTHVKRVHRLDTLDIKKLRRSRQNFAPKPIQVAVPEAKILTFDDISFVELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00391473;
90% Identity
-
80% Identity
-