Basic Information

Gene Symbol
KDM5A
Assembly
GCA_964023945.1
Location
OZ030379.1:11235496-11246041[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-25 2.5e-22 79.1 0.0 2 89 110 193 109 193 0.94
2 2 4.3 9.1e+03 -2.8 0.1 49 81 825 855 822 859 0.64

Sequence Information

Coding Sequence
ATGGTATCGAGGTTCGACACGAACTTCGGTTGCGAGGATTTTTTCGGAACTTATCGTTGCGGTGGCCAAAGCATGGCTTGTGATCGTACAGAGACGGACTTTGAGTTCACGGCACCACCGGAGGCGCCGGTCTTCGAGCCGACCAGCGAGGAATTCCTCGACCCCCTCGGCTACATTGCCAAAATACGGCCGATCGCGGAGAAGTCTGGCATTTGCAAGATCAAACCGCCGCCTAATTGGCAACCACCGTTCGCGGTAGATGTGGACAAATTTAAGTTTGTACCCCGAATTCAAAGGTTAAATGAATTGGAGGCCAAGACAAGGATAAAATTGAACTTCCTGGATCAGATAGCAAAATTCTGGGAACTCCAAGGCTCTTCCTTAAAAATTCCTCTTGTAGAGCGTAAAGCTCTGGACTTGTATTCATTGCACAAAATAGTCACGGATGAAGGTGGTATTGAATCAGTgacaagagaaagaaagtgggCAAAAATAGCCAACAAATTGGGCTACCCATCAGGCCGTAGTGTGGGAAGCATATTGAAGAATCATTATGAAAGAATTTTATACCCATTTGACGTCTTTAAACAAGGAAAAACTTTAACAGATATTAAAATCGAACCGAATTCTGAGATAACAGAGAAAGTAGAGAAAAGGGATAGAGACTATAAGCCTCATGGCATCATATCGAGGCAGCAAATTAAACCGCCGAACGAAAAGTTCTCACGGCGCTCGAAACGTTTCGCCGGGCAGGAGGAGAAACAAGAAATTTCTATTAAACAGGAAGACTGCAAGGAAGAGTGCGATTCAGATAATGATTGCAAAGATAGCATTAGATGTAAGAGTTTTGACGACAAAGACAACAGTAAAGAGCTTAAGAAGTTACAGTTCTATGGTGCTGGCCCGAAAATGGCCGGCTTTAATACCAAAGAGCCGAAAAAGCCGAATAAAACGAGGGGTCTGAAGCTGTCATATGAATTCGATCCTTTGGCCAAGTATATCTGTCACAATTGTGGGCGAGGAGACAATGAAGAAAATATGTTACTGTGCGATGGGTGTGATGATAGTTACCACACATTCTGTCTCATGCCACCTCTGACAGAAATACCTAAAGGAGACTGGAGGTGTCCAAAATGTGTTGCAGAAGAAGTGTCTAAACCAATGGAAGCATTTGGTTTTGAACAAGCACAGAGGGAATACACTCTTCAGCAGTTTGGCGAAATGGCAGATCAATTTAAAAGTGACTACTTCAACATGCCTGTTCATATGGTTCCCACGTCATTGGTGGAAAAAGAGTTTTGGAGGATAGTATCTTCGATCGACGAAGATGTGACGGTAGAATACGGCGCGGATCTACACACGATGGATCACGGGTCAGGCTTCCCAACGAAAACGAGTGTCAATTTATTCACGTGCGATCAGGAGTACGCTGAATCGTCGTGGAACCTAAATAATCTTCCAGTATTACGGGGAAGTGTGTTGGGCCACATTAACGCCGATATAAGCGGCATGAAAGTTCCATGGATGTATGTGGGTATGTGCTTTGCAACTTTTTGCTGGCACAATGAGGATCACTGGAGTTACTCCATTAATTACTTGCACTGGGGTGAACCAAAGACATGGTACGGCGTGCCTGGATCGCAAGCTGAGCGATTCGAACATTcaatgaaatccgcagcccctGAACTCTTTCATAGTCAGCCAGACTTGCTGCATCAGTTAGTGACTATTATGAACCCGACTATTTTGACTGGCGAagGAGTACCAGTAtttagaacagaccagcatgCAGGTGAATTTGTAGTCACTTTTCCAAGGGCATATCATGCAGGATTTAACCAGGGATATAATTTTGCGGAAGCAGTCAATTTTGCACCAGCCGATTGGCTGAAGATTGGAAGGGACTGCATATCGCATTACTCCAACCTACGACGGTTTTGCGTATTTTCGCATGATGAATTGGTCTGCAAAATGTCGCTGGATCCGGACTCACTGGATATCGGAATCGCAACAGCAACATATCACGACATGCTGCAAATGGTGGACGATGAGAAGAAATTGAGGAAGAACTTACTCGAATGGGGAGTAACGGAGGCAGAGCGCGAGGCATTCGAATTGCTGCCCGACGACGAGAGGCAGTGCGAGGCTTGCAAGACGACTTGCTTCTTAAGTGCAGTTACATGTTCGTGTCAGAGTTCACAGCTCGTTTGTCTGAGACACTTTACCGAACTCTGCGATTGCCCCCCAGAGAAACATACATTACGATATCGCTACACCTTGGACGAATTGCCCATCATGTTACAAAAGTTGAAACTGAAAGCCGAGTCTTTCGACTCGTGGGTAACCAAGGTGAAGGAGGCGATGGACCCGAAAAATGACAAAATAGATTTGAGTGATTTGAAAGAACTCCTCAACGAAGCTGAGATCAAAAAGTTCCCCGAGAGCGAACTACTCACAGCATTAACCACCGCTGTACAAGATGCTGAGAAGTGTGCAAGTGTTGCGCAGCAACTTTTGAACAGCAAGCAACGTACAAGGACTAGACAATCAGTAGAAACCAAATATAAACTTACAGTGGAAGAGTTAACTTTGTTTTATAAAGAGATTACAAATCTGTGCTGTGAGCTCAAAGAATCTGATGGAGTCAAGTTTATATTAGATCAGGTGCTACAGTTTCAAAAAGATGCGGAAGAGTTGGAGACTAAGGGAGAAGATTGTGATATTGAAAAGCTGGAGAAGTGTATAGAATTTGGTGATTCCATTTGTATAGAGCTACCTCAGTTGCTTAATCTTAAACAGAAGTTGACACAAACACAATGGTTGGAGGAAGTGAAATCCCTGCAAGATGACCCGAAATCTATAACACGCGAAGATCTTGCAAAGCTCATCGAAAAGGGCATGACAATTCCTCCACACTTCAGTGTGGAAAATACTCTGTCCGAGTTACAAACGTTACTGGTTGGACTTGATCAGTGGGAGGACAAAGCTAAAACATATCTACATACAAAGAACAGGCAGACTATTGCAGCGTTAGAAGAGTTTCTGCACGAGGCAGATTCGGTTGAAGCATATCTGCCAACTTTAGATACTCTTCAAGATGTTttaaataaggctaagaattGGATGACAATGGTAGAAGAAGTTCAAGCTCGAGAAAATTTCCCTTATTATGATACTATTGATGAACTTATCAGGAAAGGCCGAAATATTCCACTTCATCTAGACAGTCTGCCTATTTTGGAATCTACACTTTCCCAAGCAAAAGCATGGAAGGAGAGAACAGCAAGAACATTCCTAAGAAAGAATTCGCATTATACTTTGATGGAGGCTCTATCTCCAAGAATTGGTGTTGGTGTTCAAGCACTGAAGACTAAGAAAAATAAGGGAGAGGATACAATTGGTGCAGTTTATGTATGTGACACAAGATtagatgacacaaatgattccGCCAGTGTCGTGGCTGCATTCAAGTTGGCCGAGCAGCGAGAGATGGAAGCTATGAGAAATCTCAGAGAACGTAATGTAATGAAAGCAGAAATGGATGACTCGAGGTATTGCGTTTGCCGACGAGCCAGATTCGGACTTATGCTTCAGTGTGAGCTATGCAAAGATTGGTTCCACTcGAATTGTGTACCATTGCCAAAAACATCGGGGAAAGGGAAGATCCCATCACCTAAGGATATTAAATTTTTGTGCCCCTGTTGTTTACGATCGCGGAGGCCGCGATTGGAAACAATTCTAGCACTTCTAGTTAGTCTCCAGAAAATCCCTATCAGGTTACCTGAAGGTGAGGCATTGCAATGTCTCACAGAACGTGCAATGAATTGGCAGGATCGGGCGAGGCAAGCATTGGCTACTGATGAGATATCAACGGCGTTAGCAAAACTCTCAGTACTTTCGCAGAAACTCGTAGAAGCAGCAGCAAGAGAAAAGACTGAGAAGATCATAAGCAGCGAATTAAAGAAGGCAGCAAACAACCCGGAATTACATCAAAGGGTTCAAGCAATTGCACCTTTGAGTGGTGTGCATTCAGATGATAGTGCACTTAGCACCGCTgacgacgacgacgatgtgGTTACCATCGATGATGAGGAGCCAAGTTGCAGTACTTTCAATAGTAAGGAACACGCTTATTCGTATATATCGAAACTTCAACGGAAATCTCAGTCCAATGACACCGGTGAAGCACCTGTTGTGTTATCGCAGTCTGCGAGATTACGTCTCGAAGAATTAATGATGGAAGGTGACTTGCTAGAAGTCGCATTGGATGAGACCCAGCACATATGGCGTATTCTTAGTAACACCAACAGTCCTAGTACCATTAGGAAATATGCGGCACTCGATGAAGTGCAAACCAACAATAATCAAGATAAAGATATAAAGAAACGTGGTAGGAAGAGGAAATCTGAAGAATTCgaattgctaaaaaaacttggtCGACAAAAAGTGGAAGAGAAAAATGTTGTAAAACGCAAAAGCATTGCGAAAGAGAAGAAGTCGGCCAGTTCACCGGTGCCAATGAAACGTGGTCCTCGCAAGATGAAGCGAAAGGATGGCGAGGAGGGCCCGAGAAAGAGGGGTGGCAACAGAAAGAAGACCAAGCAGGATACATCTGACGAAGAAGATGATTGCGCGGCAGTGAATTGTTTGCGACCCAACGGAAGGGAAGTCGATTGGGTTCAATGTGATGGTGGTTGTGAGGGTTGGTTCCATATGCATTGCGTTGGTTTGGACCGTACAGAAATCGCAGAAGAAGATGATTACATATGTAGTAATTGCAAAGGATCAGAACAAAGTTCAGCGTCAAGAGGGCCAGACCCACTGGCTGAATCATTAGGCCTGGATGcacttctttcgctttctcaATCCCAGGGATACCGGGCGACAGATAGCGAGGCCGACATTCAAGAATCACCATCGTTCGTGAGGACCTACTAG
Protein Sequence
MVSRFDTNFGCEDFFGTYRCGGQSMACDRTETDFEFTAPPEAPVFEPTSEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGGIESVTRERKWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLTDIKIEPNSEITEKVEKRDRDYKPHGIISRQQIKPPNEKFSRRSKRFAGQEEKQEISIKQEDCKEECDSDNDCKDSIRCKSFDDKDNSKELKKLQFYGAGPKMAGFNTKEPKKPNKTRGLKLSYEFDPLAKYICHNCGRGDNEENMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPTILTGEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRDCISHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCQSSQLVCLRHFTELCDCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPKNDKIDLSDLKELLNEAEIKKFPESELLTALTTAVQDAEKCASVAQQLLNSKQRTRTRQSVETKYKLTVEELTLFYKEITNLCCELKESDGVKFILDQVLQFQKDAEELETKGEDCDIEKLEKCIEFGDSICIELPQLLNLKQKLTQTQWLEEVKSLQDDPKSITREDLAKLIEKGMTIPPHFSVENTLSELQTLLVGLDQWEDKAKTYLHTKNRQTIAALEEFLHEADSVEAYLPTLDTLQDVLNKAKNWMTMVEEVQARENFPYYDTIDELIRKGRNIPLHLDSLPILESTLSQAKAWKERTARTFLRKNSHYTLMEALSPRIGVGVQALKTKKNKGEDTIGAVYVCDTRLDDTNDSASVVAAFKLAEQREMEAMRNLRERNVMKAEMDDSRYCVCRRARFGLMLQCELCKDWFHSNCVPLPKTSGKGKIPSPKDIKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARQALATDEISTALAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSALSTADDDDDVVTIDDEEPSCSTFNSKEHAYSYISKLQRKSQSNDTGEAPVVLSQSARLRLEELMMEGDLLEVALDETQHIWRILSNTNSPSTIRKYAALDEVQTNNNQDKDIKKRGRKRKSEEFELLKKLGRQKVEEKNVVKRKSIAKEKKSASSPVPMKRGPRKMKRKDGEEGPRKRGGNRKKTKQDTSDEEDDCAAVNCLRPNGREVDWVQCDGGCEGWFHMHCVGLDRTEIAEEDDYICSNCKGSEQSSASRGPDPLAESLGLDALLSLSQSQGYRATDSEADIQESPSFVRTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00873598;
90% Identity
iTF_01497981;
80% Identity
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