Basic Information

Insect: Ecliptopera silaceata
Gene Symbol: -
Assembly: GCA_932527285.1
Location: CAKOBM010000243.1:1040759-1050076[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.7 41 5.2 1.0 1 23 324 347 324 347 0.95

2 8 0.00067 0.039 14.7 4.5 2 23 355 376 354 376 0.95

3 8 1.3e-05 0.00078 20.0 4.5 2 23 408 430 407 430 0.97

4 8 0.011 0.65 10.8 0.2 1 23 434 457 434 457 0.91

5 8 0.0013 0.079 13.7 0.6 2 20 475 493 474 495 0.93

6 8 0.18 11 7.0 6.7 2 23 532 554 531 554 0.89

7 8 1.4e-05 0.00085 19.9 2.0 1 23 592 614 592 614 0.97

8 8 1.1e-05 0.00068 20.2 1.7 1 23 620 643 620 643 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.7	41	5.2	1.0	1	23	324	347	324	347	0.95
2	8	0.00067	0.039	14.7	4.5	2	23	355	376	354	376	0.95
3	8	1.3e-05	0.00078	20.0	4.5	2	23	408	430	407	430	0.97
4	8	0.011	0.65	10.8	0.2	1	23	434	457	434	457	0.91
5	8	0.0013	0.079	13.7	0.6	2	20	475	493	474	495	0.93
6	8	0.18	11	7.0	6.7	2	23	532	554	531	554	0.89
7	8	1.4e-05	0.00085	19.9	2.0	1	23	592	614	592	614	0.97
8	8	1.1e-05	0.00068	20.2	1.7	1	23	620	643	620	643	0.98

Sequence Information

Coding Sequence: ATGTCTAAATTAAAAATATGCCGTATATGCCTCAATACAAACGTAAAAGGCTATTCATTGGATTTAAGTAATCTACGAGAAGCTTATGAAGCATTACTAGGAATAATATTGAACCCCCAAGATGGGTTTCCTTATTGGGCCTGTTTTGAATGTGCCGCTTTGCTGCACAAATTCCATAAGTTCAAAGAGAAGTGCCAGAATGGACAGAAAGTTCTGGAGATCATGCAGAGCTCGATACCGATATCATATAAATCAGTTAGCCAAATAAACAGACTAACAGAAAACCTGAATTCGTCATTATCTGTAGTAGTAGCCAGCAAACATATAAAAACTTACATTTATAAATATGCACAAAAACTTAAAAAAGGGCCTCAAAAGCCACCCATAGAGCATATATATTATGATAATGATTCCACTGTTAAAAATGAGGAAGGTACTTTAATACCTAGCATGTTAGAAGATAGCGTTTTCAAACAAGATGAAGATTTGATAATACCCAATATAATAGAGCAGGAAGGCGATATTAAAATAGAACTTATTACTGAAGAGACTGACAATATATCCATAGATAATGAGCAGGACGACAATATATCAATAGACAATGACCATGCCGACATTCTATCAATAGACAATCACCATACTGAAATATTGGATTCTGATCATATAACAAATGCTGATTATACCAATAATATAGATCAAAACAATGCAGTAAACAATTCAAAACATGACAATCTTTCAAGCGATGATGAGAACATATTCTTAGACATAATAAAAAAAAACAAAGGAGAAAACCTAGTCTTTCTCGATGCAAAAAATTCTATTATAGATAAAAGTAAACCAAAAAGGTTTATACGAACAAAAAAGGTTCATTTACCCACTGAGTATTGGAAGAAATACTGGCTGGCGGAAGAAGAAGCTGTGGACGAGTTTAAAAAAAAAGAACTTGATGATAAATATATGAAGGCAAATTACAAATGTCAACTCTGCTTAAAATGGTTCTCTAAACAAGATATATTAATACGTCATGAGAAATTGAAACATGATGAGTGTCTAGGCTCAATGGAGTGCAAGTTCTGTCACATGAGATTTAAGTTCAAATATCAGCTCACAAAACACATGGTCCTACATTATGCCGTGTTCCACTGTCTGCGGTGCGATATGAGATTCCATCTAGAGCCTTCCGCTATATCGCACGAAGCCTATCACAACGGCGTGGTTAAAAAATGCAAAGAATGCGGAAAAGAGTTCAAACACTCGTCTACGATGTACACACACATGCGTATGTCACACCGCAGTGCACACATATGCAACCTGTGCGGAGAGTCCTACGTCAGTGAGGCCGGCTTAGCGCAACATTCTCAACTCAAACACTTCGACAAAACCACGGAAACTTCAACAACAAAATCTCTTGATAATAACATATACTGCGAGAAATGTGACTTGAAGTTTATCTCGCAAAGCGCCTACAACCGTCATCTGTCCCACTCTAAACTGCACACCGACGAGATTGACGACATACATTTGAAAGGGAATAAAGAAAAGTTCCCCGGAGATACTTCAAGGAAACAAATGAAAAAACCTTGGAAACCTACTACTTGTAATCATTGCGGCAAACACTTCCCCACACAAGCGGCGTGCATGAAGCACCATGTGTCGGAGCACCCCGGGAAGACGTTCTATTCCGGAAACAGACATATGTGCGAAGTCTGCGGGGCTTCTGTAGCGGCTGGCACCATAGCATACCACATTAACAAGCACACGCGTGAGAAGTTGCATTCGTGCGATACATGCGGCATGCAGTTCACCATGAAAGCCAACCTGCGGCGGCATCAAGCGACGCACACCGGCGACCGTCCGTACCCGTGTCCGCTGTGCGAGAAGCGATTCACTCAGAAGAACAGCATGCAGCTGCATTACCGCACCTTCCATCTCAAGCAACCCTATCCCAAGAGCAACCCTATCCCAAGAGGTAACTATCTACTACAAGAACAGCATGCAGCTGCATTACCGCACCTTCCATCTCAAGCAACCCTATCCCAAGAGGTAACTATCTACTACAAGAACAGCATGCAGCTGCATTACCGCACCTTCCATCTCAAGCAACCCTATCCCAAGAGCAACCCTATCCCAAGAGGTAACTATCTACTACAAGAACAGCATGCAGCTGCATTACCGCACCTTCCATCTCAAGCAACCCTATCCCAAGAGGTAACTATCTACTACAAGAACAGCATGCAGCTGCATTACCGCACCTTCCATCTCAAGCAACCCTATCCCAAGAGCAACCCTATCCCAAGAGGTAACTATCTACTACAAGAACAGCATGCAGCTGCATTACCGCACCTTCCATCTCAAGCAACCCTATCCCAAGAGGTAACTATCTACTACAAGAACAGCATGCAGCTGCATTACCGCACCTTCCATCTCAAGCAACCCTATCCCAAGAGCAACCCTATCCCAAGAGGTAACTATCTACTACAAGAACAGCATGCAGCTGCATTACCGCACCTTCCATCTCAAGCAACCCTATCCCAAGAGGTAACTATCTACTACAAGAACAGCATGCAGCTGCATTACCGCACCTTCCATCTCAAGCAACCCTATCCCAAGAGAAACCGAAAACCGAAAGCAGATGAAATGCCAATAATGGAGTCTTGA
Protein Sequence: MSKLKICRICLNTNVKGYSLDLSNLREAYEALLGIILNPQDGFPYWACFECAALLHKFHKFKEKCQNGQKVLEIMQSSIPISYKSVSQINRLTENLNSSLSVVVASKHIKTYIYKYAQKLKKGPQKPPIEHIYYDNDSTVKNEEGTLIPSMLEDSVFKQDEDLIIPNIIEQEGDIKIELITEETDNISIDNEQDDNISIDNDHADILSIDNHHTEILDSDHITNADYTNNIDQNNAVNNSKHDNLSSDDENIFLDIIKKNKGENLVFLDAKNSIIDKSKPKRFIRTKKVHLPTEYWKKYWLAEEEAVDEFKKKELDDKYMKANYKCQLCLKWFSKQDILIRHEKLKHDECLGSMECKFCHMRFKFKYQLTKHMVLHYAVFHCLRCDMRFHLEPSAISHEAYHNGVVKKCKECGKEFKHSSTMYTHMRMSHRSAHICNLCGESYVSEAGLAQHSQLKHFDKTTETSTTKSLDNNIYCEKCDLKFISQSAYNRHLSHSKLHTDEIDDIHLKGNKEKFPGDTSRKQMKKPWKPTTCNHCGKHFPTQAACMKHHVSEHPGKTFYSGNRHMCEVCGASVAAGTIAYHINKHTREKLHSCDTCGMQFTMKANLRRHQATHTGDRPYPCPLCEKRFTQKNSMQLHYRTFHLKQPYPKSNPIPRGNYLLQEQHAAALPHLPSQATLSQEVTIYYKNSMQLHYRTFHLKQPYPKSNPIPRGNYLLQEQHAAALPHLPSQATLSQEVTIYYKNSMQLHYRTFHLKQPYPKSNPIPRGNYLLQEQHAAALPHLPSQATLSQEVTIYYKNSMQLHYRTFHLKQPYPKSNPIPRGNYLLQEQHAAALPHLPSQATLSQEVTIYYKNSMQLHYRTFHLKQPYPKRNRKPKADEMPIMES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -