Esil008844.1
Basic Information
- Insect
- Ecliptopera silaceata
- Gene Symbol
- -
- Assembly
- GCA_932527285.1
- Location
- CAKOBM010000041.1:989757-1003172[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 4 2.4e+02 2.8 0.3 1 14 244 257 244 262 0.80 2 12 0.038 2.2 9.1 1.0 1 23 275 297 275 297 0.96 3 12 5.9 3.5e+02 2.2 0.1 1 15 301 315 301 319 0.72 4 12 0.00018 0.01 16.5 1.8 1 21 329 349 329 350 0.93 5 12 0.0069 0.41 11.5 1.3 2 21 358 377 358 378 0.92 6 12 0.00019 0.011 16.4 0.2 2 23 394 415 393 415 0.94 7 12 0.00024 0.014 16.1 0.2 1 23 420 442 420 442 0.98 8 12 0.00034 0.02 15.6 5.7 1 21 451 471 451 476 0.94 9 12 0.00039 0.023 15.4 1.7 1 23 484 507 484 507 0.92 10 12 0.038 2.3 9.1 0.5 1 23 513 536 513 536 0.87 11 12 0.005 0.3 11.9 0.4 3 19 549 565 547 566 0.92 12 12 0.045 2.7 8.9 0.8 1 23 579 602 579 602 0.98
Sequence Information
- Coding Sequence
- ATGAAGGAAATCAATATAAATATCGAGGGATACAATGTGAATGGGATATGCGTCGGCTGTTTGAACTACAAACGTAAAATGTTTTACGATGACGATGTGAACAAGTGCTACAAAACTATTGCAAATATCGATGTTCCCGATGGTTTGACCATACAGGTGTGCTGGGAATGTCTAGCAGCTGTTAAAACAATTACAAAATTCAAAACACAAATACTGGCCGCTTATGATGTACTTATCAACTATTCTAAAGAGCATACATTTCTAAATTCCCCGAAAGACTTCACTCAGTACTCGTCCACCCGTCTCACAACATCTCAGGTGTTTCTTGGAGACAATTTAGGACCCGATGTGAACGATGACAATGATGATATTAAAACTGAAACGAAGGATGAAGGTGGTGTAGACTTTGATGTTGAaagtataaaaGCAGAAGACAATAACTCAGAGCAATCACAAGATTTTCCTCAAGATTATCTTCAAGATGAGTTTCAAAGTCACGATGCATTTATATCTAAAGATATATCATCCGACGAAGATTTGCAACTCTCTCAAATAAAGGAGCGGAAAGAGAAAAAGAAGAAGAAAAAAGATAAGTCACAAAAATCTACAAAAAATCGCAAGCTAAAGAACTTACCAGGGAACATAGTACATCTATACACAATGACTGAAAATGAAATGTCTGTAACTCGAGCTAACGACGTCAACAGCGAGTGTTTTAAACGACTTAAATACTCGTGCACTGATTGTGCGATAGGATTTAACTCGCTGAAGCTTAAGGAATATCATGATAATGGTAAACATAAACGGAAATCAGGGAAGTCTCACCAATGCGACGTATGCAAAGCGTATTTTTTAAATAAAGACAATTTATCAGTACATCGCGCGTTGCATCTGTCTGCGTACAAATGTGTAGAATGCGGCCTGCTCACTACTATGAAGAGGCTCATGCTGGAGCACCCCTGCGCTAAGGGCGAAGCGACGGAGCACCCTTGCACTAACTGTGATAAAGTTTTTAATTCAAAATCTAAACTATCATACCATCGTAGCACAGCATGTCGTATTGAAAAGCCGCAGTGTGATTGTTGTGGGAAAGTATTCGCCAACAAAATGACGCTCAAATATCATCTCAAATTATTACCATTGAAGAAAGAAGATAAAACAAAGGAGAAATTATATATACCTTGTAAAGGATGCAATAAAGTGTTTCAATCCAAGAAAAGTTACAGAGCACATGTAGTAATTCACGAAGGGCATTCGTACCCATGTCCTATTTGCGGCAAATTGTTTATGTGGAAGAGGAATCTATCGAGACACACGCGAGCCCACCGCGATAGGGACGCGGGCGCTACGCATCAGTGTCGCGAATGCAATAAGACGTTTGCATCTAAAGATTGTTACAACAATCACATGCGGCTGAGTAAAAGGCACGCCAGCGAGTCTACGTATGTCCATGAATGTAACTACTGCGGTAAAAAGTTTCCGACGAAATGGTGTATGGTGGATCATATCGACTGGGATCATTTGAAACGAGTCaaatatcaatgcagcttctgttttaagCCATTTAAAACGGCTAAAATAATGGTGGCGCATGTGAATAATATTCACGGCGGCAGGAAACGAGAACCCGACGGAGCGCATCTATGCGAAGTTTGCGGAAAGTCTTACAAGACAGTGAAGCGGCTGAAGGCCCACGTGTGGGCAATGCACACACAACGATCGACCGCTAAGAGTTATAAATGTTCTCTCTGCGCCGCATCGTTCACTTGGCAGACCAGCATATACAAACATATGAAGATGATGCATTCCAACAAACGGACTAAGGTATTGTACTATTTGTACTACACCAGGGCCGGACTAAGATATTATGTTACACCAGGGCTGGATTAA
- Protein Sequence
- MKEININIEGYNVNGICVGCLNYKRKMFYDDDVNKCYKTIANIDVPDGLTIQVCWECLAAVKTITKFKTQILAAYDVLINYSKEHTFLNSPKDFTQYSSTRLTTSQVFLGDNLGPDVNDDNDDIKTETKDEGGVDFDVESIKAEDNNSEQSQDFPQDYLQDEFQSHDAFISKDISSDEDLQLSQIKERKEKKKKKKDKSQKSTKNRKLKNLPGNIVHLYTMTENEMSVTRANDVNSECFKRLKYSCTDCAIGFNSLKLKEYHDNGKHKRKSGKSHQCDVCKAYFLNKDNLSVHRALHLSAYKCVECGLLTTMKRLMLEHPCAKGEATEHPCTNCDKVFNSKSKLSYHRSTACRIEKPQCDCCGKVFANKMTLKYHLKLLPLKKEDKTKEKLYIPCKGCNKVFQSKKSYRAHVVIHEGHSYPCPICGKLFMWKRNLSRHTRAHRDRDAGATHQCRECNKTFASKDCYNNHMRLSKRHASESTYVHECNYCGKKFPTKWCMVDHIDWDHLKRVKYQCSFCFKPFKTAKIMVAHVNNIHGGRKREPDGAHLCEVCGKSYKTVKRLKAHVWAMHTQRSTAKSYKCSLCAASFTWQTSIYKHMKMMHSNKRTKVLYYLYYTRAGLRYYVTPGLD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00737762; iTF_01220129; iTF_01429348; iTF_00686658; iTF_00119908; iTF_00638965;
- 90% Identity
- -
- 80% Identity
- -