Basic Information

Insect: Ecliptopera silaceata
Gene Symbol: cam1
Assembly: GCA_932527285.1
Location: CAKOBM010000033.1:1105200-1125937[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.14 8.2 7.4 3.0 1 23 232 254 232 254 0.98

2 10 0.0092 0.55 11.1 0.4 1 19 261 279 261 280 0.95

3 10 0.12 7.2 7.5 2.2 1 23 288 310 288 310 0.95

4 10 0.00083 0.049 14.4 4.2 1 23 315 338 315 338 0.97

5 10 0.067 4 8.4 1.1 1 23 342 365 342 365 0.94

6 10 0.0034 0.2 12.4 0.1 3 23 412 433 410 433 0.95

7 10 0.0016 0.098 13.4 0.2 2 23 460 482 459 482 0.96

8 10 0.00011 0.0065 17.1 0.6 1 23 495 517 495 517 0.95

9 10 0.00037 0.022 15.5 1.9 1 23 523 545 523 545 0.97

10 10 1.1e-06 6.5e-05 23.4 0.1 2 21 551 570 551 571 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.14	8.2	7.4	3.0	1	23	232	254	232	254	0.98
2	10	0.0092	0.55	11.1	0.4	1	19	261	279	261	280	0.95
3	10	0.12	7.2	7.5	2.2	1	23	288	310	288	310	0.95
4	10	0.00083	0.049	14.4	4.2	1	23	315	338	315	338	0.97
5	10	0.067	4	8.4	1.1	1	23	342	365	342	365	0.94
6	10	0.0034	0.2	12.4	0.1	3	23	412	433	410	433	0.95
7	10	0.0016	0.098	13.4	0.2	2	23	460	482	459	482	0.96
8	10	0.00011	0.0065	17.1	0.6	1	23	495	517	495	517	0.95
9	10	0.00037	0.022	15.5	1.9	1	23	523	545	523	545	0.97
10	10	1.1e-06	6.5e-05	23.4	0.1	2	21	551	570	551	571	0.95

Sequence Information

Coding Sequence: ATGAAGACTACTAAAATATGCCGAATTTGCTTGAGCATAACAAAACCACTACATAAGTTGGAAAAATACCTCTCGGACTATTTTCTGGAAATCTGCGAATATGCTCTTCAAAATGAATCCTTAAACCATCTTTGCTGCGTGCCATGTGAGGAAAGCTTGAAGAGCAGTTTAGATTTTAGAAATAAATGTCGCAGCTCAAACCAGATATTGCAAGACTGGCAATGGGAGAAAGACGAGCAAAAACAGCCGATAGAATCCTTAGAAAAGTTACTAGAATCTTGCACAAGCCAACCAAAACCAAAAGAGTATTTAGATATAAAAAAATATGAAAAAAACGATATATTCAAAGAAGATGCTATAAAAGAAGAAATAAAAATAGAATCCAACAATGAATATGAAGTCACTACTTTTGATGATAATTTTGATGAGAGTAGTGAAGAGTCTATCGATGATAAAATAAAGAAGAAGAGGACTAGAAATGCTAAAGTAGCTAAGAAGAAGATCAAGAAGAAGGAGACACAGTCTAAGGTTGAAAAAGTTCCTACAAAATACAAGTTGAGAGGTGAAATAGCGAAGAGGAGTGAATTCACACAATACGAGCCCGTTTTTGATGTACAACTATTCGCTACATATGCAGATGCAAAACAAGAGTTATTAGCTCGTCAAACTTCAGAGCCGTATGTATCAGCTCAGTTTAGATGTGAGCTGTGCTTCACTGTCTTTAAATGTGACAAACTGCTCAAATGGCATTTAAGATGGCACGATGTTACAGCTGGATCCCACGAATGCGATGTATGTTCGATGCGATTCGTGTCGCGTGCGACATTACTCAAACATAAGCCGGCGTGTCATCGAGGGAAATTCTCCTGTAAAATATGTCCACTTGTCACTTATCATAGACAAACAATGAAAGCGCATTTTGTGAAACACCAAGGGAAAGGCTTCACTTGCGAAGTTTGCGACCATGTTTTCAGACATATATCATCGTACATGACACACAAACGGATAACGCATCAATCGTCGCATATATGTGAGACTTGTGCGAGGACTTTCATATCGGAACTTGGACTACAAACACATCGATATAGAATGCATCAGGCTGATATGAAAGTTGATAGTAAATTGTCCGTCCGATGTGAACCATGTGCCTTGACATTTCCAAATCAACAAATATACACCGTCCATGTACTGAACACGGACGAGCATAAGGACATTGCAAACACACTAACAGCTTGTTCGATATGTGGACTGCCATTCGACGATTTGGCACAAGTCAAGGAACATCGTAGACTCAGTCATCCGAGAACTCCGAAAAAAAATAATAAAAACTTGAATAAGAAAGATAGTCTCAAGAAAAAGGAAAAATCTGCCGATATTGAGTGCAAAATTTGCGGCCTTTCGGGCAGCAATAATTTCTGGCTGTACCAACACTTCAGGACTGTCCATCCAACTGCACAATATGAGGCGTCGAGTGAGAGAGAATTTCTGTGCGATCAGTGCGGAAAGGGATTCTATAATAAAACAGTTTTAAAGGAACATATGTACGTACATAGTGGTCTGAAACCGTTCAGATGTGAACAATGTCCGGCCGCCTTCCGATCTAAGCAACATTTACGGCTACATTCTGAGCGACACAATCCGCCGTCCAGAGAATGTCCACAATGCGGCAAGAAGTTTTCGAGTCAGTCCAATCTAGCAAATCACGTTCGAGCTCGATACTTCAAAGAACAAGATATCGACGAGTTCCGCGAATGTTTCTACCTGTTTGCGCGGTCGGGCCAGATCACCTCGCTGGATGAGCTAACTGTGGTCATGAGGTCTTTGGGTATGAGCCCTACCATCCAGGAGTTGGCAGGCTATTTAAAAGGAAAAGGAGGGAAGATGTCATTTGCAGACTTCTTAGAAGTCATGCATATACATTCAAGAGCTGAAAATTTACCAACTGAGGTGGTGAATGCGTTCAAAGCGGCCGACAACGACAAGAGAGGGACGGTACCGGCGAGGCAACTGCGGAATCTGCTGCACAACTGGGGAGAAGGACTTTCCACTAGAGAGGTATTATTTTTTTCCTAG
Protein Sequence: MKTTKICRICLSITKPLHKLEKYLSDYFLEICEYALQNESLNHLCCVPCEESLKSSLDFRNKCRSSNQILQDWQWEKDEQKQPIESLEKLLESCTSQPKPKEYLDIKKYEKNDIFKEDAIKEEIKIESNNEYEVTTFDDNFDESSEESIDDKIKKKRTRNAKVAKKKIKKKETQSKVEKVPTKYKLRGEIAKRSEFTQYEPVFDVQLFATYADAKQELLARQTSEPYVSAQFRCELCFTVFKCDKLLKWHLRWHDVTAGSHECDVCSMRFVSRATLLKHKPACHRGKFSCKICPLVTYHRQTMKAHFVKHQGKGFTCEVCDHVFRHISSYMTHKRITHQSSHICETCARTFISELGLQTHRYRMHQADMKVDSKLSVRCEPCALTFPNQQIYTVHVLNTDEHKDIANTLTACSICGLPFDDLAQVKEHRRLSHPRTPKKNNKNLNKKDSLKKKEKSADIECKICGLSGSNNFWLYQHFRTVHPTAQYEASSEREFLCDQCGKGFYNKTVLKEHMYVHSGLKPFRCEQCPAAFRSKQHLRLHSERHNPPSRECPQCGKKFSSQSNLANHVRARYFKEQDIDEFRECFYLFARSGQITSLDELTVVMRSLGMSPTIQELAGYLKGKGGKMSFADFLEVMHIHSRAENLPTEVVNAFKAADNDKRGTVPARQLRNLLHNWGEGLSTREVLFFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -