Basic Information

Insect: Ecliptopera silaceata
Gene Symbol: -
Assembly: GCA_932527285.1
Location: CAKOBM010000036.1:2163055-2173594[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1 62 4.6 0.1 3 23 108 128 106 128 0.95

2 18 0.0023 0.13 13.0 0.6 2 23 132 154 131 154 0.90

3 18 0.24 14 6.6 1.3 3 23 406 427 404 427 0.95

4 18 0.15 8.7 7.3 0.3 1 19 435 453 435 456 0.94

5 18 0.16 9.2 7.2 0.3 2 23 466 487 465 487 0.94

6 18 1.6 95 4.0 0.5 1 23 503 526 503 526 0.79

7 18 0.032 1.9 9.4 3.6 1 23 535 558 535 558 0.97

8 18 0.046 2.7 8.9 2.7 1 20 635 654 635 658 0.84

9 18 4.6 2.8e+02 2.6 1.1 1 23 663 686 663 686 0.89

10 18 8.4e-05 0.005 17.5 2.7 1 23 692 714 692 714 0.97

11 18 2.3e-06 0.00014 22.4 1.8 1 23 721 743 721 743 0.98

12 18 3.9e-05 0.0023 18.5 1.4 1 23 748 770 748 770 0.96

13 18 0.0017 0.1 13.4 2.4 1 23 776 798 776 798 0.97

14 18 1.8e-06 0.00011 22.8 1.6 1 23 804 826 804 826 0.98

15 18 4e-05 0.0024 18.5 3.0 2 23 833 856 833 856 0.96

16 18 0.0018 0.1 13.3 0.6 2 23 866 888 865 888 0.96

17 18 0.026 1.5 9.7 0.4 1 23 893 915 893 915 0.96

18 18 0.00029 0.017 15.8 3.4 1 23 921 944 921 944 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1	62	4.6	0.1	3	23	108	128	106	128	0.95
2	18	0.0023	0.13	13.0	0.6	2	23	132	154	131	154	0.90
3	18	0.24	14	6.6	1.3	3	23	406	427	404	427	0.95
4	18	0.15	8.7	7.3	0.3	1	19	435	453	435	456	0.94
5	18	0.16	9.2	7.2	0.3	2	23	466	487	465	487	0.94
6	18	1.6	95	4.0	0.5	1	23	503	526	503	526	0.79
7	18	0.032	1.9	9.4	3.6	1	23	535	558	535	558	0.97
8	18	0.046	2.7	8.9	2.7	1	20	635	654	635	658	0.84
9	18	4.6	2.8e+02	2.6	1.1	1	23	663	686	663	686	0.89
10	18	8.4e-05	0.005	17.5	2.7	1	23	692	714	692	714	0.97
11	18	2.3e-06	0.00014	22.4	1.8	1	23	721	743	721	743	0.98
12	18	3.9e-05	0.0023	18.5	1.4	1	23	748	770	748	770	0.96
13	18	0.0017	0.1	13.4	2.4	1	23	776	798	776	798	0.97
14	18	1.8e-06	0.00011	22.8	1.6	1	23	804	826	804	826	0.98
15	18	4e-05	0.0024	18.5	3.0	2	23	833	856	833	856	0.96
16	18	0.0018	0.1	13.3	0.6	2	23	866	888	865	888	0.96
17	18	0.026	1.5	9.7	0.4	1	23	893	915	893	915	0.96
18	18	0.00029	0.017	15.8	3.4	1	23	921	944	921	944	0.98

Sequence Information

Coding Sequence: ATGTCTTCTGACGATTCCGACGACGAACCACTAGCCGTACTGGCCACGAGAAAAACAAACTACGAAGTTGAAATATTGCCTGCCAAAAGCAAACCTCGTAAGAAAAAGTCTTATTCTGCCAAAAAGGACTGCGACGTGACGATAGAACTCCAATACAAAGATGAGCTCACCTCAGTCACTGTGGAAAGGCCCACGGATGTCTGGCTTTATCTGAAAGACTTGAATCCAAACGGGCCATACAGCTGCCTGCTCTGTTCAGAATGGTTTATCAACAAGACTAAAATAGTCATACACTATGTGATTAATCATAAGAAGGACTTCTGTGGGATATGCAGATATTTTGTCCCAGACAGAGAAGCTTGGCAAGCTCACACAAAGTTCCATATACCATGGCAATGCTCACAGTGCCCTAAAACATTTTACAATGAATTCCTGCTACGTGAACACTTCAGCGAGGAACACAATCTAGTGCACTGTCGACTGTGCCACACTCGACTCATTGACGGTAGCGACTACCACACACATCTGTACCAAAAACATAGTGTGACTAATGTCTCCTGTAAAAATGAAGAGGCTTTCTGGGAGTTTGATCAGGAAGACTTGAAATTCCTCTGCATTCTCTGCTCAAAATCCGACAATCCAATACAGACATTCTCCAACCATTACATGGCATTCCATCATTTGACACTGAAATGTATGGCTCCATTGATCTCAGGGCAAAACTGGAACTTTCCCGTTCAAGGTGCTGAGGTGAGCATTGATTTCACCGACAGACAGCTCAAGCAATATGATAAATATGGGTATCTGGATCTTGATAAAAAGCCAGACAGGCTTATTGAGAAAGATGAAAGTGTGATGCTTGCTAGAGTTGTAACAAATGAGGTTGCTATCGAACTTGTTAAACAAGAAGTTTTGAGTGAGCATGAGGAGAATCCCGGTGCTGATGATGATGATGAAGGGACTGCCGACGATGATGCAGATAAAAAAGATTACGAGCCTGAAGCCAACACAGAGCCAGATTCAAAACCAGAACTGTATAAAACATACAAAGGAGATGAAGACTTTGACACAACACAAATTGAAGTGGTAGTCCTGCAAAAGTGCTACTATGACTATCTTGAAGAAACAATGAATAAAATCAGCCGTCACACCTTACCTCAGATATCCACTATAAATTATGCATTGTCTATCGCAGACCAGCCTGTTTACATTGATTGTGAGTTGTGTGAATGTCAATACACAACGCTTAATACTTTCGTAACACATATGACAAAAGCACATAGTTTTAAATCGCTGTCAACATTTTCATGCAGAATATGTGCTGCAACATTTGACAGCCATACCGAGTTGGAGCAGCATGAGAGCCAGGAGTTGGGAGAATTTGATGATCTGTGGATCTGTCAGTTTTGTGAGACGGAGTTTAGTAATCGAGTTGAGACGAGGGAACATTTGTCGGAGCATTGGGGGTCTCTAGAGTATGATAACTGCTTCAGTCCTCATTTGGGGTTCAAGTGTAAATATTGCCCGACTTTGTTTTGGAATGAGACAGATCGAGAGAGTCATCTTGTGAGGGTACATTTTCACAAGCACACATCGGACTACTATAAGTGTGATAGTTGTAATCAACTTTTTAGTGATAAGGTTTGGTTCATACACCACTACTTTACGAGGCATACTACAAACCAACAAGTACAGATTGGCTCATACCTACTTAAATGCAACTTATGTTGCATTGTGTTTCCGGATGTGGAATCTATGAGGAGCCACTTCAGTGCAAAGCATGCTGAAGCTAAAAGAATCTTCTGCTCGCTTGACAAATGTAAATACAAGCCGTTCAGCCATAAGAAATCATTCCATTTGCATCTGAAGGCATACCACAGCAATAAAAAGCGTGCAGAGACATTTACATGTCAATGGTGCGGTAAGCAGTTTAGCAGTCAAAGGTCATGCAGCGCCCACGCCACTCAGTCCCATGGACCGGGACGATTTTCCTGCAACATTTGTAAAGAACTGTTGCATACTGCCGATGAAAGAAAGATCCACTATCTCCTTCGACACCCAGGCCGTCATCCGTTCCAATGCAGGGATTGTGATAAATCCTTCCAATACAAGTCATCGTTATATCTCCATCGTCAAGAACATGCTCCTAACAAACAGGATTACAAATGTAGTTATTGCGGGAAGATTTTCAAGAAAAAAGATTCGTTCCGCGAACACGTGATGATTCACGAAGGTCCGAAACACGCGTGTTCGTACTGCCCCATGGTGTTCGTGCAACGTTCTAACATGTTGCGGCACGAACGCAGGCACACAGGCGAACGCCCTTACGCGTGTCAATACTGTCCGAAAACATTCTCCGATAAGGGCGCCTGCTCGTCGCATTCTAGAACCCATCAAAAGGTGCCAGCGTTCCCGTGCATGTATTGTGGACAAACTTTCGTGCAAAAGTCGAAACTAACTTACCATATTAGGAAACATACGGGGGAAAATCTAGAAACTTGCCCACACATAAACTGCGGCAAGATATTTACAAGTCCGTGCTCGTTGCGAGAACATATGAAAACGCACGAGAAAAAACAAATTCTTGAACCTGTCAAATGTCCACTATGCTCGAAATCATACCAAGACGAGAAATACATGATGCGACATCTACGAGCTACGCACACCAACTCGGAGTTCATCTGTCCCATTTGCAAGAAGAAGTTGCACAGCGGGGCTTCGTTACGGGACCATGTTGTGACCCATAGCGGGTCTAAAGTCTATAAGTGTAATCAATGCTCAAAATCGTACAACGTGAAACGCACAATGATCAGACATCTACGCCGCCGCCACGGCCTCAAAACCTCCGGCAATCCAAACGAATACTACAAGAAGCTCGATCCTAGAGAATGCAACTTGAATCTAGATGATGAAACAATGAATAGTATATTTGGACCTCCGAAAAGAAAACTCACTGAAGCTATCAACTTTACGGATGTCAACAAAAGACCTAAATTAGGCCGGCAAAGTCCTGGCAGTGATGGTGAAAGACCTCTCATAGAAAATGTACAAGTGAAAATTGAGTGTCAGGAAGCGGATGAGGAAGAAATGAGTGAAGTGCAGCCGACTGATTTTGTGAGTGTGAAAATTGAATGTACTGAAGGTAGCGGGGAAGATGAGATGGGGTTCAGTGAGGAGGACTGA
Protein Sequence: MSSDDSDDEPLAVLATRKTNYEVEILPAKSKPRKKKSYSAKKDCDVTIELQYKDELTSVTVERPTDVWLYLKDLNPNGPYSCLLCSEWFINKTKIVIHYVINHKKDFCGICRYFVPDREAWQAHTKFHIPWQCSQCPKTFYNEFLLREHFSEEHNLVHCRLCHTRLIDGSDYHTHLYQKHSVTNVSCKNEEAFWEFDQEDLKFLCILCSKSDNPIQTFSNHYMAFHHLTLKCMAPLISGQNWNFPVQGAEVSIDFTDRQLKQYDKYGYLDLDKKPDRLIEKDESVMLARVVTNEVAIELVKQEVLSEHEENPGADDDDEGTADDDADKKDYEPEANTEPDSKPELYKTYKGDEDFDTTQIEVVVLQKCYYDYLEETMNKISRHTLPQISTINYALSIADQPVYIDCELCECQYTTLNTFVTHMTKAHSFKSLSTFSCRICAATFDSHTELEQHESQELGEFDDLWICQFCETEFSNRVETREHLSEHWGSLEYDNCFSPHLGFKCKYCPTLFWNETDRESHLVRVHFHKHTSDYYKCDSCNQLFSDKVWFIHHYFTRHTTNQQVQIGSYLLKCNLCCIVFPDVESMRSHFSAKHAEAKRIFCSLDKCKYKPFSHKKSFHLHLKAYHSNKKRAETFTCQWCGKQFSSQRSCSAHATQSHGPGRFSCNICKELLHTADERKIHYLLRHPGRHPFQCRDCDKSFQYKSSLYLHRQEHAPNKQDYKCSYCGKIFKKKDSFREHVMIHEGPKHACSYCPMVFVQRSNMLRHERRHTGERPYACQYCPKTFSDKGACSSHSRTHQKVPAFPCMYCGQTFVQKSKLTYHIRKHTGENLETCPHINCGKIFTSPCSLREHMKTHEKKQILEPVKCPLCSKSYQDEKYMMRHLRATHTNSEFICPICKKKLHSGASLRDHVVTHSGSKVYKCNQCSKSYNVKRTMIRHLRRRHGLKTSGNPNEYYKKLDPRECNLNLDDETMNSIFGPPKRKLTEAINFTDVNKRPKLGRQSPGSDGERPLIENVQVKIECQEADEEEMSEVQPTDFVSVKIECTEGSGEDEMGFSEED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00638923;
90% Identity: -
80% Identity: -