Basic Information

Insect: Ecliptopera silaceata
Gene Symbol: ZNF280A
Assembly: GCA_932527285.1
Location: CAKOBM010000038.1:579263-582365[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0035 0.21 12.4 0.1 3 23 221 242 219 242 0.92

2 10 0.0042 0.25 12.1 0.4 2 23 268 290 267 290 0.96

3 10 0.016 0.96 10.3 0.5 2 23 314 335 313 335 0.95

4 10 0.00014 0.0082 16.8 3.8 2 23 340 361 339 361 0.96

5 10 0.32 19 6.2 1.4 1 13 366 378 366 379 0.91

6 10 0.00044 0.026 15.2 1.3 3 23 399 420 397 420 0.96

7 10 5.7e-07 3.4e-05 24.3 1.3 1 23 427 450 427 450 0.98

8 10 0.0031 0.18 12.6 1.0 1 23 456 478 456 478 0.97

9 10 6.1e-07 3.6e-05 24.2 2.7 1 23 484 506 484 506 0.99

10 10 4e-05 0.0024 18.5 1.4 1 23 512 535 512 535 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0035	0.21	12.4	0.1	3	23	221	242	219	242	0.92
2	10	0.0042	0.25	12.1	0.4	2	23	268	290	267	290	0.96
3	10	0.016	0.96	10.3	0.5	2	23	314	335	313	335	0.95
4	10	0.00014	0.0082	16.8	3.8	2	23	340	361	339	361	0.96
5	10	0.32	19	6.2	1.4	1	13	366	378	366	379	0.91
6	10	0.00044	0.026	15.2	1.3	3	23	399	420	397	420	0.96
7	10	5.7e-07	3.4e-05	24.3	1.3	1	23	427	450	427	450	0.98
8	10	0.0031	0.18	12.6	1.0	1	23	456	478	456	478	0.97
9	10	6.1e-07	3.6e-05	24.2	2.7	1	23	484	506	484	506	0.99
10	10	4e-05	0.0024	18.5	1.4	1	23	512	535	512	535	0.97

Sequence Information

Coding Sequence: ATGTCCTCGCAGCCCCAGTGTCGGTGCTGCCTGACGCGCCCTCCGGACAAGAGCCTAAAGTCAAAATACACCGTTCTAGGCAAAACTGAAATCTATGCCGATATGCTGAAGGAATGCTTCGAAATACACTTGTACAGTAGTGATGATGAGACGGGTATCTGCGAGGCTTGCATCACTCGGCTCCGGGACGCAGCTGACTTCAAGAAGCAAGTCCAGTGTTGTCAGAAAGAGCTTAAAAACCTTGTGGAATCTTATGTGAAAGATGAAACAAAGACCCCTATCAAAGAGGAGGCTACTGATTATGATGATGACAATGGAGTTTACTTCTTAGATTTAAAATCTGAGCTTTCTGAATATGGGGAACTGCATGATGATGAAGACGACAAAAAACTGGCAGAACTGCTCGCGAATACGCTGAACGCAAAGCAAAAGACCAAAAAGAGAATCAATAGCAAAACTGAAAAGAAACTTAAGAAAAAGACCAAACCATTGAAAATCTCCATCCGGGCGCTCGCTAACCTGGATAAGATCATCAAACCAGTGAAAACGATCAGCGTGCTCAGAGTCACGGAAAATCTCAAACACAAAACTAACATCGAAAACCTCATCAAGTATTCCAATTGCACTCCATTCACTAACAAAACACTATCTGGTATCATTTGCGCGTATTGCAAAGAGACTTACATGAACCCGCAAGATCTCCGGACCCACATAGACTTAGTTCACAAAAACGCAGACATTACGGATCATAAAAAAATGGACAGAAACAACCTAGCATACaaaatcgatatcacgaacctaaaatgcaacttatgccaagcaaacttcgactttatatcaactcttaaacagcaccttataaccgaacatgatatcaaattttatccagatgtaaatgactatattctcgaattcaaactcagctccgaagaaattctaaactgtgcattatgtaattcaacatttgaaactttcaagatgttactgcaacatatgaacggacactatagaaattgtatatgtgaaatatgtgatctaggattcataaataaacacagattaagaaatcaccagcggacccatgaagaaggtacatttaactgttccttctgcgagaaagtattcacaactcgtgtacgaaaaatgtgccacgagaaatacacgcataatagtaacgctaggtatacaacaaactgtcctcaatgcgaacagtcttttaacagctactaccaacggaacaggcacatgtatacggaacataacacggtcgctgctagctaccgctgcaatatttgtgataaatccttcatcctcaagtctaagctaacttcacacatcaaaaaagtccatctaatggaacgaaaccacacgtgcactgtctgcggacaaggtttttttataaaacaatccttagacgagcatatgattaaacataacggtgaaagggtttaccaatgtacggtctgtcataaggcatatgccagaaagaaaactttaagagagcatatgaggatacataacaatgataggaggtttaaatgcggtatttgtgggttagcgtttgtgcagaaatgtagtatgaaaagtcacatgctgtctaaccatggCATTACATTAGCTGAGTATGAATTGAAAGTGGATTTGACTAAACCGAAAGAAAATGAATGCATTGATTTGGTGCGCTAG
Protein Sequence: MSSQPQCRCCLTRPPDKSLKSKYTVLGKTEIYADMLKECFEIHLYSSDDETGICEACITRLRDAADFKKQVQCCQKELKNLVESYVKDETKTPIKEEATDYDDDNGVYFLDLKSELSEYGELHDDEDDKKLAELLANTLNAKQKTKKRINSKTEKKLKKKTKPLKISIRALANLDKIIKPVKTISVLRVTENLKHKTNIENLIKYSNCTPFTNKTLSGIICAYCKETYMNPQDLRTHIDLVHKNADITDHKKMDRNNLAYKIDITNLKCNLCQANFDFISTLKQHLITEHDIKFYPDVNDYILEFKLSSEEILNCALCNSTFETFKMLLQHMNGHYRNCICEICDLGFINKHRLRNHQRTHEEGTFNCSFCEKVFTTRVRKMCHEKYTHNSNARYTTNCPQCEQSFNSYYQRNRHMYTEHNTVAASYRCNICDKSFILKSKLTSHIKKVHLMERNHTCTVCGQGFFIKQSLDEHMIKHNGERVYQCTVCHKAYARKKTLREHMRIHNNDRRFKCGICGLAFVQKCSMKSHMLSNHGITLAEYELKVDLTKPKENECIDLVR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00737733;
90% Identity: iTF_00737733;
80% Identity: -