Basic Information

Insect: Ecliptopera silaceata
Gene Symbol: -
Assembly: GCA_932527285.1
Location: CAKOBM010000020.1:2289042-2302571[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.02 1.2 10.0 5.8 1 23 248 270 248 270 0.98

2 11 6.6e-06 0.00039 21.0 0.5 1 23 276 298 276 298 0.99

3 11 0.00021 0.012 16.3 3.0 1 23 304 327 304 327 0.95

4 11 0.031 1.8 9.4 3.3 1 21 333 353 333 355 0.95

5 11 0.00014 0.0084 16.8 2.7 1 23 361 383 361 383 0.99

6 11 5.8e-05 0.0034 18.0 3.2 1 23 389 411 389 411 0.98

7 11 0.0094 0.56 11.0 0.6 1 23 419 442 419 442 0.96

8 11 0.024 1.4 9.8 4.3 2 23 449 470 448 470 0.96

9 11 0.00033 0.019 15.6 1.9 1 23 476 498 476 498 0.98

10 11 8.6e-06 0.00051 20.6 2.6 1 23 504 527 504 527 0.96

11 11 2.7e-05 0.0016 19.1 7.1 1 23 541 563 541 563 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.02	1.2	10.0	5.8	1	23	248	270	248	270	0.98
2	11	6.6e-06	0.00039	21.0	0.5	1	23	276	298	276	298	0.99
3	11	0.00021	0.012	16.3	3.0	1	23	304	327	304	327	0.95
4	11	0.031	1.8	9.4	3.3	1	21	333	353	333	355	0.95
5	11	0.00014	0.0084	16.8	2.7	1	23	361	383	361	383	0.99
6	11	5.8e-05	0.0034	18.0	3.2	1	23	389	411	389	411	0.98
7	11	0.0094	0.56	11.0	0.6	1	23	419	442	419	442	0.96
8	11	0.024	1.4	9.8	4.3	2	23	449	470	448	470	0.96
9	11	0.00033	0.019	15.6	1.9	1	23	476	498	476	498	0.98
10	11	8.6e-06	0.00051	20.6	2.6	1	23	504	527	504	527	0.96
11	11	2.7e-05	0.0016	19.1	7.1	1	23	541	563	541	563	0.97

Sequence Information

Coding Sequence: ATGGAAATTGAACACTTTGTTATTGTTGCAGTCATGCCGCCAGAGACGCGGAAGTACACGAGGAATAAAGCACCACCACCTGCTCCCACTTCTGCTCCAGCCATGGCGACTTTCATGACGGAGAGTGTTGAGGCCGAAGAAGATGGAGATGAGATGACGGATGATGGCGTTACGTACTTCGTCGATGAGGAGGGGCGCTACTACTATCAGCCCAACCCTACTGAGAGCGACATTGTCGCTCTGGATACGGAAACTGGCGCAGCGCAGGAGGTTCAGCCACAGCCCATGGAAGATATGATAGTACCTGATGTGGATGGCAGCTTCACTCAGACAGTGACCCTGGTCCCTTCGGAGAACACCAACGGAGAGGTCAGCTATGTCCTGGTGGTTGCTGACGAGAACAAGGACCTTGTCAATCTGAACATCAAGATGGACACAGATGTAGGACAGCTTTGGTGTGGTGTTCACAAAAACGCTTACACCTTGTGTTCTGTTTCAACTTGCTTACGATGGACACATCAGAAAGTGAATTTGGTGATGCCAAATACTGCTTCAACATCACAGGCTCCTGAAGCACCGAATCAAACAGAAGAAGAAGAAGAAGATGAGGAGAAACAGGACGGGGCAGGTGATGTGTACACGTTTGAAGATGATGAGGAAGAGGAAGGGTCAGCTGCCGCGTCTGATGATGAAACGGCTCCGCTTGGCAGGCAGCGCACTCGACATAAGTCGCGCTCCATCTTTACTTGCAACTTCTGTTCGTACAACAGCCATAGACGTTACCTCCTTCTGCGTCACATGAAGTCCCATTCCGAGGATCGTCCGTACAAATGCACCGTTTGCGAGCGCGGCTTCAAGACCCAAGCCTCTCTGCTCAACCACGTGAACATGCATAACGGCATCAAGCCGCACATCTGCAAGTACTGCAAGAGTACCTTCACCACTTCAGGCGAGTTGGTGCGTCACGTGCGTTACAAGCACACCCATGAGAAGCCGCACAAATGCAACGAGTGCGACTACGCATCTGTGGAGCTGTCCAAGCTGCGCCGTCACGTGCGCTGTCACACAGGGGAGAGACCTTACCAGTGCCCTCACTGCACCTATGCCTCCCCGGACACGTTCAAGCTGAAACGTCATCTCCGCACTCACACAGGCGAAAAACCATACAAGTGTGATATGTGCACTATGTGCTTCACACAATCCAACTCGCTGAAGGCGCACAAACTGATTCACAACGTGTCAGAGAAGCCGGTGTTTGCGTGCGAGTTGTGCCCCGCTAAATGCGGCCGTAAGACCGATCTCCGCATCCACGTCCAGAAGCTGCATACATCTGAGCAGCCGCTCAAATGCCGTCGCTGCGGCAAATCCTTCCCGGACCGTTACTCTTGCAAGGTCCACAACAAGACCCACGAAGGCGAGAAGTGCTTCAAATGCGACCTGTGCCCATACGCGTCGACCACCCTGCGTCACCTGAAGTCGCACATTCTCAAGCACACCGATGAGAAGCCCTTCTCATGCGACCAATGCGACCAGACCTTCAGGCAAAAGCAGCTGCTCCGTCGTCACCAGAATCTATACCACAATCCTGACTACGTGCCGCGTCCGCCGAAGGAGAAGACTCATACTTGTCACGAGTGCCATCGCACATTCGCCCACAAGGGCAATCTGATGCGGCACCTCGCCATCCACGACCCGGAGTCGGGACATCATGAGCGCGCTTTGGCGCTCAAACTCGGCCGTCAGAAGAAGGTCAAATATATCGACGCTAACGCTAACAAGCACCCATTCCTCTCCGAGATCAAGACGGAAGGTGAGAACAGTGAAATGGTGAAGGTCGGCGTCAGCAACTCCCTCAAGCGAGGAGAGCTGGTTACGGTGTCCGATGGTGATGGACAGCAGTATGTGGTGCTCGAGGTCATTCAACTCGAGGATGGAACCGAACAACAGGTGGCTGTTGTTGCACCTGACTTCTTGCAAGGAGAGGAAATTGAAGAGGAAGAAATTGACGAGTATGGTGATGAGGAGATCTTGGAGGATGAAGAGGAAAATGAAGAGGAGAAGAAAAACAACCAGAAACAGCTGCGTCTGCAGGAAGCCACCGAGCGCAGCATCAAGCTCGAGAAGGAAGTCGATACATGCTTTGGATTCGACGTTAGCGATGGCGAAGAAGGTGAGACTGAGGTGGAGACGCTAGTGGAAATCGCCGAGGAGGATGATGAAGAGGAAATGGAATTGGATGAGGAAGCTGGCAGCTCGAACGGCTTGCCCGGCAAGGACGATGCGGCAGTGCCCACGCATCTGCCACAACTACTGTTCGCAGAAGACGAAGAAGATGACGAAGAACAGCAAGTTGTTTACGAGTTGGTGTGA
Protein Sequence: MEIEHFVIVAVMPPETRKYTRNKAPPPAPTSAPAMATFMTESVEAEEDGDEMTDDGVTYFVDEEGRYYYQPNPTESDIVALDTETGAAQEVQPQPMEDMIVPDVDGSFTQTVTLVPSENTNGEVSYVLVVADENKDLVNLNIKMDTDVGQLWCGVHKNAYTLCSVSTCLRWTHQKVNLVMPNTASTSQAPEAPNQTEEEEEDEEKQDGAGDVYTFEDDEEEEGSAAASDDETAPLGRQRTRHKSRSIFTCNFCSYNSHRRYLLLRHMKSHSEDRPYKCTVCERGFKTQASLLNHVNMHNGIKPHICKYCKSTFTTSGELVRHVRYKHTHEKPHKCNECDYASVELSKLRRHVRCHTGERPYQCPHCTYASPDTFKLKRHLRTHTGEKPYKCDMCTMCFTQSNSLKAHKLIHNVSEKPVFACELCPAKCGRKTDLRIHVQKLHTSEQPLKCRRCGKSFPDRYSCKVHNKTHEGEKCFKCDLCPYASTTLRHLKSHILKHTDEKPFSCDQCDQTFRQKQLLRRHQNLYHNPDYVPRPPKEKTHTCHECHRTFAHKGNLMRHLAIHDPESGHHERALALKLGRQKKVKYIDANANKHPFLSEIKTEGENSEMVKVGVSNSLKRGELVTVSDGDGQQYVVLEVIQLEDGTEQQVAVVAPDFLQGEEIEEEEIDEYGDEEILEDEEENEEEKKNNQKQLRLQEATERSIKLEKEVDTCFGFDVSDGEEGETEVETLVEIAEEDDEEEMELDEEAGSSNGLPGKDDAAVPTHLPQLLFAEDEEDDEEQQVVYELV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00686624;
90% Identity: -
80% Identity: -