Esil006876.2
Basic Information
- Insect
- Ecliptopera silaceata
- Gene Symbol
- -
- Assembly
- GCA_932527285.1
- Location
- CAKOBM010000033.1:329217-341602[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 3.7e-05 0.0022 18.6 2.0 1 23 262 284 262 284 0.99 2 12 1.7 99 4.0 0.3 1 23 291 313 291 313 0.94 3 12 0.44 26 5.8 1.9 1 23 317 340 317 340 0.98 4 12 0.051 3 8.7 3.7 2 23 348 369 347 370 0.94 5 12 1.7e-07 1e-05 26.0 0.6 2 23 376 397 376 397 0.98 6 12 0.00027 0.016 15.9 6.8 1 23 403 425 403 425 0.98 7 12 0.001 0.059 14.1 1.9 1 21 431 451 431 456 0.93 8 12 2.7e-05 0.0016 19.1 0.1 1 23 464 487 464 487 0.97 9 12 2 1.2e+02 3.7 0.1 1 23 493 515 493 515 0.94 10 12 0.098 5.8 7.8 0.1 1 11 524 534 524 538 0.88 11 12 4.6e-06 0.00028 21.4 2.2 1 23 545 567 545 567 0.98 12 12 0.0025 0.15 12.9 0.2 1 23 573 596 573 596 0.94
Sequence Information
- Coding Sequence
- ATGGAAACTACAGCAGGCGATGAAGAAGAATCTAAAATAGGTTTCGACGTCGAGAAACAGATCTGTAGATGTTGTCTTAGCACAGAAAAACGAATGATAAATGCTATTACCTTGCAACAGCATTTCTTCGAATTAGCTGGTATTAATGTGTCGGTGTCAGACGGAGTCTCTCATTGGGTGTGCTTCGAATGCAGTGCTCTCATGAAGAAAGCCGTCCGGTTCAAGCACAAGATGCTGCGAGCTCACAGCATGTTATACGATTATCTTATGCGATGTGCTCCGTTCCCAATAGAGCCATCTGACCCAGAACTGGTCCGATACAAGACTCCTCAGTTAACCACAACGAATATCCTCACCTTCGACTCGGCCAAACCAAAGATAGGTTTTCATAAAGTACTACAGATAGAAAAAAAAGAAGTGAAGTCCGAGCTCGCGTTCATAGATATAGAAACAGGCACGGAGCTGCTTAAACAAGAAGGACCCTCGGACTTTGAAGATGATCTACCGTTAGAGGAATTTAGATCAGGAAATAGAGAAGACGAAGATATAGATGAAGTTAAGAGTGAACCGGAAGTGAAGCGGAAAAAAAAAGAAAAAGAACCAAAGATTAAGAAGAAAAAGAAAATAAGCAAAGATATAGAAGAATCAAAAGAATCATCCCGGAAGTATTCAATCAGAAAACCAATAGAAATAGACCCAGAGAAAATTAGAATCATTACTTTGAATCCTGAGGAACAGATTAAACAAAGAGAGGAGGAAAGCAAAGCAAAAGTAAAATTTCCTTTCCAATGCGAGTTGTGTTATAAAGGATTTAATTTCGAGTCTAAGTTAGAAAATCACATGAAAAAACATAGTCCGTCCCGCGGTCAATACGAGTGTACATTATGTTCAATGTACCTTCCCACAATGTACTCGTTCAGCGTACATTCGTTGATACACACTCGAAGGTACGAATGTGTCAAATGTGAGAGGAGAATGATCGACCGAGCATCGATCTATCATCATTACAGAACTCAGCATGAAGGTATTACAACAGTAATAACTTGCGATCTCTGCGGTAAAGTTTCAAGCAATAGTAAAACTCATCGAGGCCATATGCGAAACCACCATTCCGGGGACCGACCGAAATGTGATCAATGTGGGAAGTCGTTTGTGAATAAGGACTCACTTACCGAACATATGCAaATCCACGAAGGCGTCAAGAACTACGAATGCTCCGTGTGCGGGAAGCGGTGTCGAACCCGCACTCAAATGAAACATCACCAGTTAAAACACACCAACGTGAAGGAATTCTACTGCGTCGAGTGCGATGTTAGATTCAAATCGGCGCACAGTTTGCGACAGCATTTAACTAAAAGTCTGAAGCACAAGGATATCAATACTTTTACCTACGCGTGCGACCGTTGCGACAAGCGCTTCGAGTCCCCCCCCGCGCTGGAGCGGCACGCGCGCGTGCAGCACGACGGCGAGCGCGCCTTCCCGTGCGCCGCGTGCCCCGCGCGCCTCGCCTCGCGCGCCTCCCGGGACAAACATCTACGGAGACACACCGCGCCGCCCGCACGGCATAGTCATGTGTGTCACACCTGTGGGAAGGCATTCCCGTTACTAGCTAACTCGCCGGCGAGGCATAGTCATGTGTGCCATACTTGCGGGAAGGCATTCCCGGGTAAAAGTGTGCTAACGAACCACCTTCGAACCCACACCGGCGAGAAGCCGTTCTCGTGCGCGCTGTGCGGGCGCGCCTTCAGCCAGCGCACGGCGCGCGCCACGCACGTCAAACTGGTGCATCTCAAACTGCGACGGAATAAGCCTATCAAAGACGAAGTGCCAGCGCCGATAATCGAACCCAAACCTGATCTCTTCCCCAAAAATGAACCTCAAGTAGTCTACGACGCTTGGAACAGACCCTGTGACGTGTTTTACGTCACTGCTGGACCTTGA
- Protein Sequence
- METTAGDEEESKIGFDVEKQICRCCLSTEKRMINAITLQQHFFELAGINVSVSDGVSHWVCFECSALMKKAVRFKHKMLRAHSMLYDYLMRCAPFPIEPSDPELVRYKTPQLTTTNILTFDSAKPKIGFHKVLQIEKKEVKSELAFIDIETGTELLKQEGPSDFEDDLPLEEFRSGNREDEDIDEVKSEPEVKRKKKEKEPKIKKKKKISKDIEESKESSRKYSIRKPIEIDPEKIRIITLNPEEQIKQREEESKAKVKFPFQCELCYKGFNFESKLENHMKKHSPSRGQYECTLCSMYLPTMYSFSVHSLIHTRRYECVKCERRMIDRASIYHHYRTQHEGITTVITCDLCGKVSSNSKTHRGHMRNHHSGDRPKCDQCGKSFVNKDSLTEHMQIHEGVKNYECSVCGKRCRTRTQMKHHQLKHTNVKEFYCVECDVRFKSAHSLRQHLTKSLKHKDINTFTYACDRCDKRFESPPALERHARVQHDGERAFPCAACPARLASRASRDKHLRRHTAPPARHSHVCHTCGKAFPLLANSPARHSHVCHTCGKAFPGKSVLTNHLRTHTGEKPFSCALCGRAFSQRTARATHVKLVHLKLRRNKPIKDEVPAPIIEPKPDLFPKNEPQVVYDAWNRPCDVFYVTAGP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00638918;
- 90% Identity
- -
- 80% Identity
- -