Esil014666.1
Basic Information
- Insect
- Ecliptopera silaceata
- Gene Symbol
- -
- Assembly
- GCA_932527285.1
- Location
- CAKOBM010000070.1:1215419-1218111[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.0031 0.18 12.6 1.6 1 23 153 176 153 176 0.95 2 17 0.0005 0.03 15.0 1.2 1 23 185 208 185 208 0.96 3 17 0.1 6.2 7.8 0.5 2 23 221 243 221 243 0.97 4 17 0.00052 0.031 15.0 3.4 1 23 252 275 252 275 0.97 5 17 0.00014 0.0085 16.8 1.4 2 23 287 309 286 309 0.95 6 17 0.00015 0.0086 16.7 0.4 2 23 338 360 337 360 0.96 7 17 9.9e-06 0.00059 20.4 1.2 2 23 370 392 369 392 0.96 8 17 0.52 31 5.6 1.0 3 19 398 414 396 416 0.94 9 17 4.5e-06 0.00026 21.5 0.2 2 23 422 444 421 444 0.97 10 17 0.016 0.94 10.3 1.3 3 23 456 477 455 477 0.94 11 17 8.7e-05 0.0052 17.4 6.4 1 23 482 505 482 505 0.98 12 17 0.0037 0.22 12.3 3.3 1 23 516 539 516 539 0.91 13 17 0.062 3.7 8.5 1.8 1 23 560 583 560 584 0.92 14 17 0.0093 0.55 11.1 0.1 2 23 590 610 589 610 0.97 15 17 0.033 2 9.3 2.1 2 23 616 637 615 637 0.97 16 17 0.015 0.87 10.4 0.3 1 23 703 725 703 725 0.97 17 17 0.085 5.1 8.0 1.8 1 23 731 754 731 754 0.97
Sequence Information
- Coding Sequence
- ATGTCCCCACCTGTAGAAATAAAACAAGAGATTGATGAACGGAAAGATCCAACCACCTTTCTACCCCAAGAAGAGATGAGTTATGAGATCAAAAAGAAAAAGAAGAAGAAGAAAAAAAAGAAACAAGAAGATCCGTTCAAGGATGTAGAAGCCAAATTAGCTGTGTTCAGGGAACCGGATATAACCGCTTTGGATCCGGATATTGGGTCCTTGGATCCGGAGGTTACTATCAAGGTTGAGGATATTGATGTGGATTTAAACGTTGAAGAGTTCAACAACGATGACTGCCTCCAAGATTCCTTCGAAGAATGCAAACTAGAACCAACCGTCAAACTAGAAGACCAGAGCAGTGACGCCGTCGTACTAACCTTCCAAAACATCGTAAGCGACAAGTTGAAAACAGAAAAATTGCTCAAAAAAGATAACAAAATAAAACTCGAACCATCCGGAGAGAACCATTTCTGCGAAGTCTGCCGTCTGGTCTTCAAAACTGCTAAGTCCTTAGATATACACAGGAAAAGGGCGCACAAGCATTATAGAAAGTCATTCTCTCATATATGCGATGACTGCGGGATGTCATACCAGTTTAAGAACAGTCTAGTCGCTCATATCAAAAGAAAACATGGCCCCAATGCTGTGAAAGACGACATGTTGGAACGCACTTGTGATTTGTGCGCACTAGTCTTCAAGGGCCAAGCTAGGATAAGAATGCATATGAGAAGAAAGCACGGGTTTTACGAAGATTCCTTCAACCATGAATGCGAGTACTGCGGACTGACATACGAAAAACAATGCAGTCTACTCGTTCATATACGAAGAAAACACACCCACAAAACGAAACCCAGAAAGCAGTGGCTGAATTGTCCGTTTTGCGGCAGATTTTTCGATAAAAGAGAAACGTACACTCGCCATATACAGAGAAACCATCGAGTTAACGATGAGGATGGTAAACTTAGGGATGATGATGCGGAATTTAAGCAAACTTACATGAATACAAAGACCGGTGAACTAACATGCAGCCAATGTCCTTCAGCCTTTTCCACTGTTGGCTACCTTAAATGGCACATGAGAAGAAAGCATAACGTTATGATAGATGACTTTAGACTCAAATGCAAGATCTGTAATCTATCGTACGCTAATTCAGAAAGCTTAAAGAGACATGTGCGAAGAAAACACGACAAAGGAACCTTCTGTTACGAGTGCAATAGACAATTTGGTGACCGAGACGCGTTCTTACAACACTCTCATGCAAAGATTGTCAAGGAATGTACCATTTGTGGACTCATATTCGCTAATAAAGGCGGCCTGAACAAACATTTGAGGACGACACACAAGCTGGACGGCCCTAAAGTTCATACAGTGTTTTGCCCAGTTTGCAACCAAGGTTTCGTTAACAAGCGCCAGTTGAAACCACACCACAGTCGCGTACATTTAAAAGTGACTTACACGTGTAAGTTTTGCGACAAAGTGTTTAAGACAAGAGAGTGTTACCGGAAGCATGTGATGACCAAACATCCCACCCCTACCGTCCAACAACCCAAGATGCATCAATGTGAAATGTGCCCGGAGAGCTTTAACGATGAGTTCGAATTATGTAAGCATAATAACTTTGAGCACGCTGAAATAAAACAACTAGTTATAAAAAAAGAGGAAGATGATAATAATATTAGAAATGTGTTCCGATGTACAAAATGCACGGATGAATTCGATACCTGGGAGTTACTGCGAGTCCATTTTGAACAATCACATCATATGGTCGAGGAAGTTCAATGCCAAGTGTGCGGTGCTATGCTGAGTCGGGGAGACTTGGCCAAACACATGAAGATACACGACGAAGTGGAGGTGCAATGTCGATTCTGTGACTTTAAAAGCAAGAACCGTGTTAGTATGACCCAGCATATGTTAAGACACAAGAATGCTACAACGTTGCGATGTGACTACCCCAACTGTAGATACAAAACCTTCTACGATGATGCTATGGTGAAACATAAGAAGCGACATCAAGAGTTGGGCGTCAAACTGCAATGTGCCAGTTGTCCGTTCCAAACCATGAATAAATACATCCTTAAATACCACGAAGAGGCTCATTCTACAGGAAAGAAACGGTATAAATGTGATAAATGCGAGTATGCGACGATTCTCCCAGCTAATCTAGTTCAACATAAGTACAAACATTCCGTGGAAAAGAGGTTTAAATGTGAAGTTTGTCCGTTTGCTACAAAATATAACACTTCCCTGCGGTTTCATGTTAAAACAAAACACTGTGATCTACCTAGTATGAGTAAGAGTTGA
- Protein Sequence
- MSPPVEIKQEIDERKDPTTFLPQEEMSYEIKKKKKKKKKKKQEDPFKDVEAKLAVFREPDITALDPDIGSLDPEVTIKVEDIDVDLNVEEFNNDDCLQDSFEECKLEPTVKLEDQSSDAVVLTFQNIVSDKLKTEKLLKKDNKIKLEPSGENHFCEVCRLVFKTAKSLDIHRKRAHKHYRKSFSHICDDCGMSYQFKNSLVAHIKRKHGPNAVKDDMLERTCDLCALVFKGQARIRMHMRRKHGFYEDSFNHECEYCGLTYEKQCSLLVHIRRKHTHKTKPRKQWLNCPFCGRFFDKRETYTRHIQRNHRVNDEDGKLRDDDAEFKQTYMNTKTGELTCSQCPSAFSTVGYLKWHMRRKHNVMIDDFRLKCKICNLSYANSESLKRHVRRKHDKGTFCYECNRQFGDRDAFLQHSHAKIVKECTICGLIFANKGGLNKHLRTTHKLDGPKVHTVFCPVCNQGFVNKRQLKPHHSRVHLKVTYTCKFCDKVFKTRECYRKHVMTKHPTPTVQQPKMHQCEMCPESFNDEFELCKHNNFEHAEIKQLVIKKEEDDNNIRNVFRCTKCTDEFDTWELLRVHFEQSHHMVEEVQCQVCGAMLSRGDLAKHMKIHDEVEVQCRFCDFKSKNRVSMTQHMLRHKNATTLRCDYPNCRYKTFYDDAMVKHKKRHQELGVKLQCASCPFQTMNKYILKYHEEAHSTGKKRYKCDKCEYATILPANLVQHKYKHSVEKRFKCEVCPFATKYNTSLRFHVKTKHCDLPSMSKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01429284;
- 90% Identity
- -
- 80% Identity
- -