Basic Information

Insect: Ecliptopera silaceata
Gene Symbol: -
Assembly: GCA_932527285.1
Location: CAKOBM010000053.1:9308018-9316225[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0032 0.19 12.5 0.8 1 23 298 320 298 320 0.96

2 12 0.00029 0.017 15.8 0.5 2 23 328 349 327 349 0.94

3 12 0.026 1.5 9.7 0.8 1 23 353 375 353 375 0.97

4 12 0.00044 0.026 15.2 0.5 1 23 380 403 380 403 0.98

5 12 0.00057 0.034 14.9 0.3 1 23 407 430 407 430 0.94

6 12 0.0096 0.57 11.0 0.2 2 21 448 467 448 472 0.92

7 12 0.0011 0.067 14.0 3.4 3 23 482 503 482 503 0.98

8 12 0.074 4.4 8.2 0.6 2 23 523 545 523 545 0.97

9 12 5.9e-06 0.00035 21.1 0.5 1 23 556 578 556 578 0.99

10 12 6.3e-07 3.7e-05 24.2 1.3 1 23 584 606 584 606 0.99

11 12 0.0023 0.14 13.0 1.3 1 23 612 634 612 634 0.98

12 12 5e-05 0.003 18.2 0.2 1 23 640 663 640 663 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0032	0.19	12.5	0.8	1	23	298	320	298	320	0.96
2	12	0.00029	0.017	15.8	0.5	2	23	328	349	327	349	0.94
3	12	0.026	1.5	9.7	0.8	1	23	353	375	353	375	0.97
4	12	0.00044	0.026	15.2	0.5	1	23	380	403	380	403	0.98
5	12	0.00057	0.034	14.9	0.3	1	23	407	430	407	430	0.94
6	12	0.0096	0.57	11.0	0.2	2	21	448	467	448	472	0.92
7	12	0.0011	0.067	14.0	3.4	3	23	482	503	482	503	0.98
8	12	0.074	4.4	8.2	0.6	2	23	523	545	523	545	0.97
9	12	5.9e-06	0.00035	21.1	0.5	1	23	556	578	556	578	0.99
10	12	6.3e-07	3.7e-05	24.2	1.3	1	23	584	606	584	606	0.99
11	12	0.0023	0.14	13.0	1.3	1	23	612	634	612	634	0.98
12	12	5e-05	0.003	18.2	0.2	1	23	640	663	640	663	0.98

Sequence Information

Coding Sequence: ATGAATAATTTGCTATGTGAAGGGGACGACCATGTAAAGGTTTGTCGGGTCTGCCTCATCAGGAATGTGAAAATGTATGACCTACAAACTTACCCTCTTGAATCATACTTTGAAGCTATTATTGGGTTCACTGTAATGAGTACCATGGACCTTCCTCCGTACCTGTGCTATGAGTGTGCAACACTGGTAACTAAGTTCTCAATGTTCCGAGAGCGCTGTCTGACTGGACAAGCTACTTTGTATGGCATTCTACAAAGCTGTGGAAAGGTCACAGAAAAAGAGCTAAACAAAATCGACAGACAGACATCTCGGCTCACATCTAAACTGTCCATACAATTTCCCAATAACATATACTATGCATCGGAAGGAACCACTCTACAGATGGTCAAAGAGGAGCCGAGCACAGCTGATTATGAGGTCCCTGATGGCCCCATACAGTTTAAAGAAGAAGATGACCAGATCATAGATTTCGGACATACCAGTGATGATGAACCACTTTCCGTTCATAAAGTGGTAAAAGAAAAAAAGAAAAGAGGAAGAAAGAAAAAGGTTGTTATAGAAGTACAACCAGTTGGATTAAAGAGTGAATTAGATATTTCAGAACTGATTGGTGAAGAATTGCAAATTAAAGATATGGTTGAGCAACCAGAGGTTACTGAAAACATTGATACCGGGATAGATCCAGAAGTGCCTACGCGCAAAAAAAGAGGCCGTCCTAGAAAAACTGAAGAGAAACCTATCGCCAAGTCTAGAAGAACGAAAAACACAGGCGGAGTCCACGTTGAAGATATCGATTTAGATGAGTTCGTGTCTGTTGTTAAACTGACGTTAGAAGAACAAATGGAGGAAATAACGAAACGTAAAGACTCATTAAACTATCAGAACGCAGCATTCCAATGCAACCTTTGTTTCAAAGGATTCATAGACGCTAATGCTTGGAAACATCACGTTGGGAAACATGATCCGAGTGCCGGCAACATAGAGTGTCCAGTTTGCAAGTTTCGATTCGTCACGAAACGCGCTCTTCAAAAACACGCCACCAATCATGAGAAGAAATACGCCTGCAAGTCTTGTCCTTACGTCTCTAAAACTACAACACAAGCGAAACAGCATCAAAGATGGCATAAAGGAGTTACATACACGTGCGAGTATTGTGATGAAGTCTCTACAAAATGGACGTCGTACCTTTCCCACGTGCGAATCAAACATCCATCTTCGTTTATCTGTTCAGTCTGTGGTTACTCCTTTGTAAGTCAACTCGGCCTCACCATGCATAAAACTATGATGCATAAGGATGTCAATGAAACGGAAAAAACGGAAGACAGTGATGTATCCGGTCCATACTGTCAAGAATGCGATGTTAAGTTTGTTTCTATGGAGGCGTATAACCGACATATGGTCACATCGGTCAAGCATTCCCAAAGCGATGATTTTAGTAAAGGCTGCAGAGTATGCGGAGCCACGTTCTCGAATCACGAAGAGTTACGTCTACATCACAGGAAGGAACACGCCAGGAAACGACCCAAGAATTACGGCAAGAAACCCGCCGGACATTCCTGGCCCGCCAAATGTGAACATTGTTCAGAGGTGATCCCCAACGCCCGTGAATATTGGACCCACTTCAGACGAGTACATCCAGACAAAAACTATCCTATACAGAAGGACTACGTGTGCGACGTTTGTGGGAAGAGTTTCAGGGGCAACGCGTTCTTGATCTACCACAAACGCACGCACAGTTCGGAGCGCCAGTACAAATGCGGCGAGTGCGGCAAGTCCTTCTTCAACCGAACCAACCTCAGCATGCACGCGCGCACGCACTCCGAGTCGCGGCCCTATCCCTGCGACATCTGTCTCAAGGCCTTCAAGTGCAAGGGGGCGTTGGACAGACATTATCGGAGCCACACGGGTGTAAAGCCCTACGAATGCGAAGTCTGCGGCAAAGCATTCGGTCAGTCCAACAGTCGCAAACTGCACGTCAGGACCGTGCATCTCAAGCAACCAGCGCCTTACGTCAGTCGCACGCGGATTGACAGGCGCAAGGCGTTGAAAGAACAGACGCATATCTTCGTCTATCCTACCTAA
Protein Sequence: MNNLLCEGDDHVKVCRVCLIRNVKMYDLQTYPLESYFEAIIGFTVMSTMDLPPYLCYECATLVTKFSMFRERCLTGQATLYGILQSCGKVTEKELNKIDRQTSRLTSKLSIQFPNNIYYASEGTTLQMVKEEPSTADYEVPDGPIQFKEEDDQIIDFGHTSDDEPLSVHKVVKEKKKRGRKKKVVIEVQPVGLKSELDISELIGEELQIKDMVEQPEVTENIDTGIDPEVPTRKKRGRPRKTEEKPIAKSRRTKNTGGVHVEDIDLDEFVSVVKLTLEEQMEEITKRKDSLNYQNAAFQCNLCFKGFIDANAWKHHVGKHDPSAGNIECPVCKFRFVTKRALQKHATNHEKKYACKSCPYVSKTTTQAKQHQRWHKGVTYTCEYCDEVSTKWTSYLSHVRIKHPSSFICSVCGYSFVSQLGLTMHKTMMHKDVNETEKTEDSDVSGPYCQECDVKFVSMEAYNRHMVTSVKHSQSDDFSKGCRVCGATFSNHEELRLHHRKEHARKRPKNYGKKPAGHSWPAKCEHCSEVIPNAREYWTHFRRVHPDKNYPIQKDYVCDVCGKSFRGNAFLIYHKRTHSSERQYKCGECGKSFFNRTNLSMHARTHSESRPYPCDICLKAFKCKGALDRHYRSHTGVKPYECEVCGKAFGQSNSRKLHVRTVHLKQPAPYVSRTRIDRRKALKEQTHIFVYPT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01336155;
90% Identity: iTF_00686600;
80% Identity: -