Esil014655.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ecliptopera silaceata
Gene Symbol
-
Assembly
GCA_932527285.1
Location
CAKOBM010000070.1:857026-874571[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.065 3.8 8.4 0.0 1 23 421 443 421 443 0.96
2 11 0.0002 0.012 16.3 0.8 1 23 455 477 455 477 0.95
3 11 1.4e-05 0.00085 19.9 3.0 1 23 483 505 483 505 0.99
4 11 4e-05 0.0024 18.5 2.5 1 23 512 534 512 534 0.99
5 11 5.7e-05 0.0034 18.0 0.2 1 23 540 562 540 562 0.93
6 11 1.2e-05 0.00069 20.2 0.1 1 23 568 590 568 590 0.97
7 11 5.2e-06 0.00031 21.3 1.4 1 23 596 619 596 619 0.96
8 11 3.4e-06 0.0002 21.9 1.3 1 23 625 648 625 648 0.95
9 11 0.0004 0.024 15.4 3.2 2 23 655 676 654 676 0.97
10 11 3.7e-05 0.0022 18.6 0.7 1 23 682 704 682 704 0.97
11 11 0.0019 0.11 13.3 0.1 1 21 710 730 710 734 0.92

Sequence Information

Coding Sequence
ATGGCCAAGCTTTGCATTGTATGTCACTCAACCGAACCGTTCGGAAAAGAATTCATCCAAGATGTCTTCAAGGAAGATAACACATTTCCCAGCGGTCGGAAACTTCTGGAAGCCTTATGTGACGTCATTGAAACTCAGCTGGATGAATATGCAGCATACACTAAGATACTCTGCAGAGAATGTTACAAAATGTGCCTCAACTACGATAAATATAAATCTAATGCGGCTATAATAAAAACTACGATGTGCAATTTATATCTCAACTCGCATCAGAGAGCATCAATCACTAAGATCGTCAAAGAACCGGAAAAAAAAGCATCTCCTAAGAAAATTGTTAAAGAAAGGTTTGTTGTACCAGCTTCTAAACTACAGCCATTGCCTGCAGATTATCAGCTAAATTTGGGTAAAATAGCTGCCATGACCAACACTAAGGGATTGACAGCAAAACCGCTTGTCAATCTCAAAATGACAATAGGTAACTCGATCCTAACACAAAGTCTGGCCACATCAACTGTCAAAGTGCTCCAACCGAGTGAGCTATCGAACGCACCAAACACTATCAACATCAGCGAATGGAATGTCAACAGTTTGCCAAATGAAATATTCTCAAATAACGGAGAGAGTGATAATGATAATCGGAAAATGGAGATTGATGAAGAAGGCGAAGTGGTTCCTGTTTCTGAAACTGACCCGATAATGATTGATTCTACTGCTATTAAGACTGAAACAGCAGATGAATCGCGTTATGTAAactcggaaaattacgaattgttatataacggatcggatagtgaACAACAACAACATACAATAGTAGTAGACAGTAATAGTTCTATATTACAAATGATGTCCGGACAGAAACTAGTTTACGAGAATGGACAATTGGCGCTGGTTATGGACAATGATGATAATGATGATGATGATGATAATGATGATGGACAAGATTCAAACGATGAGGAATCACAGATCGAGTTGCAAGTGTCTGGGGATGAAGAAACAGCTAACGCGATCATAGCGGCCGCTCAAGAACAAGGTGGTGCGTTTATAAAGGTGGAGAGTGGTGAGATGTATCGAGTGAAGTCTGTCGCGAGCGCGGGCGCGGGCGGCCCACCCGATACCGCGGCGCTACTCGTCGCTAAGGACGGGGACCAGTACAAGTGTCTCGTGTGTGATAACCGACGGGGTCCAATAAAGATGACATATACATGTGACGCCATTAATATGGTGAAACATATGAAGAATCAACATTCTGCTAAAGTGTACATCTGTGCAGTTTGTGGAGTTATTATGAGAAACCGCTCAGAATACGCCTCTCATATGACGGAGCATGCAAAAGTCCTTGGTACAACAAAATCTCGGTCGTACGATTGTGAGATTTGCCAGAAGAGTTATACATCGCGCACTTTGTTGCAAGAACACAATAATCTGCACACCGGCAGCCGGCCGTATGAATGCCACATCTGCGAGAAAACTTTCGCCTCCAAATATACGAGACAGGCGCATTTAAAAACGCATCAGGACAGACCTCGTCCGTTCAAATGCCAAACATGTGGAAAATCATTCCTCTCACAACAGAATTTAACGCAGCATGAAAAAACGCATCTCGGCATCAAAAGCTTCGTCTGTAATATATGCAATAAAGCGTTTGGCACACAGCACAGTCTAGAAGTTCACGGCGTGGTGCACAGCGGCCAGAAAAGTCACGTCTGCGATATCTGTGAGAAAGCGTTCGCCAGGCGCGCCGAGTTAGCAGACCACACTAGAATACATACAGGTGAGCGTCCATTCGAGTGCGAGGTGTGCGGCGCGCGGTTCTCGCAGCGTTCGAACCTGCACTCGCACCGCCGCGCCACGCACTACGACGACAAGCGCCACGAGTGCCCCGACTGCCCCAAACGGTTCAAACGACGCAGATTGCTTCAGTATCATATAAAGGCGGCCCACACCGGCGAACGTCCTTTGCAATGTGACATATGTCATTCTACATTCGTGTACCCCGAACATTACAAGAAACATCTCAAAATACATAATGGGGAGAGACCTTATTATTGTGAGATCTGCGGCAAAGCCTTCAACTCTCGCGACAACCGCAACATCCACCGCTTTGTGCACAGCGATAAGAAGCCTTATGAGTGTCTTCAGTGCGGCGCCTCCTACATGCGGAAACGGATGTTAGTCGCGCACATGAACGCCAGTGGTCATTTAGCCGAATCTATAGTAGTTAATCAACCTAGAGTTACAAAAGTCAATGAAAACCTTTTCGCTGAAAAACAGCCGGATGTTGAAGAAGCGATTGACGAAGAAAACGACAAACAAGAGGAAAATGATGAAAGTGCAAAACTTTACACATTATCCGAAGATGGTGCTGTCATCGAAACTCCGGAAGAAGCTGTAGTGAACACAGGCTTGGAACCGCCCCATGATGATAATGACAGCTACACGACAGAGTTACCAATAGATTATACAGATAAAAAAGAGAGGGATTTTGATATTTTTAAGCTTGAGGTGAGAAGAAGGGTTATGCTGGCCACATACATTTACAAACTACTGAGAGGTATGGTGTACAACCCGCGAGTACTGATGCATGTGGGTCTGTATGTGCCGAACAACTATGTACGCGCGCGGCGACACAAACTACTCGCAGAGCCCAAAGCTAGGACTAATTTGTTGAAGGAAGCTCCTTTAACTGGTGCCCTTCGCCTTATAAACAACCTTTATGAAGACGAAGAGTTCGACCTGTTTGTGGTTTCGTTGACGAAATTTACAGATAGGGCTTATTTCTACTTAAGCTAA
Protein Sequence
MAKLCIVCHSTEPFGKEFIQDVFKEDNTFPSGRKLLEALCDVIETQLDEYAAYTKILCRECYKMCLNYDKYKSNAAIIKTTMCNLYLNSHQRASITKIVKEPEKKASPKKIVKERFVVPASKLQPLPADYQLNLGKIAAMTNTKGLTAKPLVNLKMTIGNSILTQSLATSTVKVLQPSELSNAPNTINISEWNVNSLPNEIFSNNGESDNDNRKMEIDEEGEVVPVSETDPIMIDSTAIKTETADESRYVNSENYELLYNGSDSEQQQHTIVVDSNSSILQMMSGQKLVYENGQLALVMDNDDNDDDDDNDDGQDSNDEESQIELQVSGDEETANAIIAAAQEQGGAFIKVESGEMYRVKSVASAGAGGPPDTAALLVAKDGDQYKCLVCDNRRGPIKMTYTCDAINMVKHMKNQHSAKVYICAVCGVIMRNRSEYASHMTEHAKVLGTTKSRSYDCEICQKSYTSRTLLQEHNNLHTGSRPYECHICEKTFASKYTRQAHLKTHQDRPRPFKCQTCGKSFLSQQNLTQHEKTHLGIKSFVCNICNKAFGTQHSLEVHGVVHSGQKSHVCDICEKAFARRAELADHTRIHTGERPFECEVCGARFSQRSNLHSHRRATHYDDKRHECPDCPKRFKRRRLLQYHIKAAHTGERPLQCDICHSTFVYPEHYKKHLKIHNGERPYYCEICGKAFNSRDNRNIHRFVHSDKKPYECLQCGASYMRKRMLVAHMNASGHLAESIVVNQPRVTKVNENLFAEKQPDVEEAIDEENDKQEENDESAKLYTLSEDGAVIETPEEAVVNTGLEPPHDDNDSYTTELPIDYTDKKERDFDIFKLEVRRRVMLATYIYKLLRGMVYNPRVLMHVGLYVPNNYVRARRHKLLAEPKARTNLLKEAPLTGALRLINNLYEDEEFDLFVVSLTKFTDRAYFYLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-