Esil008792.1
Basic Information
- Insect
- Ecliptopera silaceata
- Gene Symbol
- -
- Assembly
- GCA_932527285.1
- Location
- CAKOBM010000041.1:346937-349864[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.00061 0.036 14.8 2.1 2 23 175 196 174 196 0.96 2 14 0.0001 0.0061 17.2 1.4 2 22 201 221 200 221 0.94 3 14 6.2e-06 0.00037 21.0 1.1 1 23 234 256 234 256 0.97 4 14 5.7e-05 0.0034 18.0 0.6 1 22 262 283 262 283 0.96 5 14 4.2e-05 0.0025 18.4 0.6 1 23 294 316 294 316 0.98 6 14 0.0016 0.095 13.5 1.9 1 21 322 342 322 343 0.93 7 14 0.066 3.9 8.4 3.5 2 23 352 374 351 374 0.97 8 14 4.4 2.6e+02 2.6 7.2 1 23 380 402 380 402 0.96 9 14 4.6e-06 0.00027 21.5 0.9 1 23 408 430 408 430 0.97 10 14 0.015 0.86 10.5 2.6 1 21 436 456 436 458 0.94 11 14 2.7e-06 0.00016 22.2 1.5 3 23 466 487 464 487 0.97 12 14 0.00016 0.0097 16.6 0.1 1 23 493 515 493 515 0.97 13 14 7e-05 0.0042 17.7 0.9 1 23 521 543 521 543 0.98 14 14 0.0054 0.32 11.8 0.3 2 21 550 569 549 570 0.90
Sequence Information
- Coding Sequence
- ATGATAGAATCCGTATGCCGTGTGTGCCTTATCGGCGATGTGTGTTTGACTGGTCATAACATTGAGAACACTACACTTTTAGAACTACATGAAAAACTCACTGGAATCAAGCTTAATACAGATGATAGAATGCCTAAAATGGTTTGCAACTTCTGTTATTCTCAGCTGAAGAAGTTTGGGAAATTCTCAAAAATGGCTGTTAAATCGGAAAACATTCTACTAGATCTATTTAACAGTGGTGAAAAGATAACATCTACCTCCATACCTACATCAAACCTAGAATCTACACATAGTTTATCAGAAACCCCGGCGCAGTTAGTGTCATTGGGCGATGACTACTCTATCTACGAATACACACAACCCAACACTTCTCATAATAGACTTGTCAGTACAAGCGTATATGATACCCAACTATTCAAAATGGAATGTATCAAAGAAGAAAATTATGAAAGTTCTGTAAAATCTGAGAATTTGTGTAGTGATGCAGATATTAAAACGGAGGCCAAAGAAGAAAGATCTATAAGCTGCAACCAATGCTCTAAGAAATTCGCAACGATACATCTACTTAGATCACATATTACATCACACTCGGATAAACTTCAATGTCAAAATTGTAATAAAACATTCTCTAGAAAACTATACTTAATTCAACATACGAAAACTTGTCAACAGATTGAAACAGTTTCCGACAGTCAGTTATTCACATGTGATGTTTGCAACAAACGGTTTTCAACTAAACCATTATTGAAATCACATAAAATAGTCCATAGCGGGCAAAAACCCTACATATGTGATGGGTGCAAGAAACCCTTTGCAAGAAAACAGGGTATGAAACATCATATGCAGACTTGCACTCAAGTAAAACCCCATATCCCAACATACCCTTGTCAGTACTGCACTAAAGTATTTGATACCGACACAGATCTAAGCTCTCATATAACAACACACTCCACAGATAAACCATACACTTGCGATAAATGTCTCAAAACGTTTACAACAAAGCAAAATCAACGACAACATTCAAAAATCTGCTTCTTGGATAACGAGGTTGTGACTTGTTCTCTCTGTCCGGACACTTTCAGTTGCAGAAGTGATCTGTGCAAGCATTTAAACACAGCGCATTCCTCACagaagccattttcttgtgaacgatgtagctctaagttttggtataaacaccatttgaaaatgcattttcggatacatacgggcgaaaagccctttgcttgtgagatctgtggacggacatttactttacggaaccatttgaaagcccatctcggtacccacagcggtgagaaacctcattcctgtgaagtctgtggtaaagcgttcctcgctcggttcaatttgaccgaacatatgcgatgtcacacaggcgaacggccgtatggctgcgaaaaatgcggcaaagctttcgggcaccaaagtaccctccgtcagcatttacgaaaagttcatatacaagcgaaaccgttcgcgtgcactaaatgttccctctctttctcccttgaaagtgctttagcgggacatatgcgcgttcatactgctgaacgaccgtacgcttgcgatatgtgcaataaaaccttcATAGAGGTGCGACATCTAAAAGGTCACATGCAAGTCCACTCGTCAGAAAGGCCCCATGCTTGTTTAGCTTGTGGCAACACTTACAAGAGGCCCGAACATCTCAGGGTACATATCAGCTCTAAATGCAAAGCTCCTAGAGGCATTCCCGGACTTGCTTCACAATTTTCATGA
- Protein Sequence
- MIESVCRVCLIGDVCLTGHNIENTTLLELHEKLTGIKLNTDDRMPKMVCNFCYSQLKKFGKFSKMAVKSENILLDLFNSGEKITSTSIPTSNLESTHSLSETPAQLVSLGDDYSIYEYTQPNTSHNRLVSTSVYDTQLFKMECIKEENYESSVKSENLCSDADIKTEAKEERSISCNQCSKKFATIHLLRSHITSHSDKLQCQNCNKTFSRKLYLIQHTKTCQQIETVSDSQLFTCDVCNKRFSTKPLLKSHKIVHSGQKPYICDGCKKPFARKQGMKHHMQTCTQVKPHIPTYPCQYCTKVFDTDTDLSSHITTHSTDKPYTCDKCLKTFTTKQNQRQHSKICFLDNEVVTCSLCPDTFSCRSDLCKHLNTAHSSQKPFSCERCSSKFWYKHHLKMHFRIHTGEKPFACEICGRTFTLRNHLKAHLGTHSGEKPHSCEVCGKAFLARFNLTEHMRCHTGERPYGCEKCGKAFGHQSTLRQHLRKVHIQAKPFACTKCSLSFSLESALAGHMRVHTAERPYACDMCNKTFIEVRHLKGHMQVHSSERPHACLACGNTYKRPEHLRVHISSKCKAPRGIPGLASQFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -