Basic Information

Insect: Ecliptopera silaceata
Gene Symbol: -
Assembly: GCA_932527285.1
Location: CAKOBM010000038.1:4007243-4009360[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0013 0.078 13.7 3.0 1 23 135 157 135 157 0.98

2 15 4.6e-05 0.0027 18.3 0.8 1 23 163 186 163 186 0.92

3 15 0.48 28 5.7 2.1 3 23 195 215 194 215 0.96

4 15 0.00073 0.043 14.5 2.6 1 23 223 245 223 245 0.96

5 15 1.5e-05 0.00091 19.8 1.8 1 23 254 276 254 276 0.96

6 15 8.9e-08 5.3e-06 26.9 2.1 1 23 282 304 282 304 0.99

7 15 2.6e-05 0.0015 19.1 3.3 1 23 310 332 310 332 0.98

8 15 2.2e-06 0.00013 22.5 1.3 1 23 338 360 338 360 0.98

9 15 8.1e-05 0.0048 17.5 2.0 1 23 366 388 366 388 0.97

10 15 1.2e-06 7.4e-05 23.2 0.2 1 23 394 416 394 416 0.98

11 15 1.7e-06 0.0001 22.8 5.6 1 23 422 444 422 444 0.97

12 15 1.2e-07 7e-06 26.5 0.4 1 23 450 472 450 472 0.98

13 15 6.1e-06 0.00036 21.1 0.6 1 23 478 500 478 500 0.98

14 15 7.7e-07 4.5e-05 23.9 0.6 1 23 506 529 506 529 0.97

15 15 2.6e-05 0.0015 19.1 1.1 1 23 535 557 535 557 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0013	0.078	13.7	3.0	1	23	135	157	135	157	0.98
2	15	4.6e-05	0.0027	18.3	0.8	1	23	163	186	163	186	0.92
3	15	0.48	28	5.7	2.1	3	23	195	215	194	215	0.96
4	15	0.00073	0.043	14.5	2.6	1	23	223	245	223	245	0.96
5	15	1.5e-05	0.00091	19.8	1.8	1	23	254	276	254	276	0.96
6	15	8.9e-08	5.3e-06	26.9	2.1	1	23	282	304	282	304	0.99
7	15	2.6e-05	0.0015	19.1	3.3	1	23	310	332	310	332	0.98
8	15	2.2e-06	0.00013	22.5	1.3	1	23	338	360	338	360	0.98
9	15	8.1e-05	0.0048	17.5	2.0	1	23	366	388	366	388	0.97
10	15	1.2e-06	7.4e-05	23.2	0.2	1	23	394	416	394	416	0.98
11	15	1.7e-06	0.0001	22.8	5.6	1	23	422	444	422	444	0.97
12	15	1.2e-07	7e-06	26.5	0.4	1	23	450	472	450	472	0.98
13	15	6.1e-06	0.00036	21.1	0.6	1	23	478	500	478	500	0.98
14	15	7.7e-07	4.5e-05	23.9	0.6	1	23	506	529	506	529	0.97
15	15	2.6e-05	0.0015	19.1	1.1	1	23	535	557	535	557	0.96

Sequence Information

Coding Sequence: ATGACTCAAACAGCAGAGACTGCTCTAACACAAATGTTTGAAAATGGATCTAAGCTCACAGAAGACATACCCAGTATGCTGTTTGTGAAACCTCACAATTTATCAATGACAGTTGTGATGCACACATCATTTGATGATCTCGAAGAGGCTGTGAAAGAGGAGCTGTCAGAATCTACTGATTATTTCGGTGATTTTGATGATGGTGATAAATGTGTCAAGGATGAAGCTAGAATCACATTTGACCCAAAAACTGTAATCAGAATTGACCTCAAGGATATTAAATCAGAAAACACTGAAACTTGCCCTAAAAATGAAGAAAGCTTATTCCAGAACCCCAATAATTTAAGCTCTGATAAAATTTATAACACTAAAGAGATTCCAGATGAGACTACTGATTTATGCTACTTTTGTCCGACATGCAACAAAAAACACGTCACAAAAAAGGCGTTGAGTCAGCACAtgagagtacacgatccaagtcgaacttatgcatgcgatatttgcgaatataggtttaataccaaagctaacttaaaaactcacaaggacaacttacatcgaaccgaaagcgaaacagtagcatgcacagtttgtcataaacttatgaacagtcaacaaatcttaaaacgacacatgaaaatacattcagaaaagccgccgaaaattcacgcttgcgatagatgcgagcttaaattttccgacaggagtaccttagttagacacaagactacgcacaccgaaggcacgccaggaaaaccacacgcttgtcaaatatgcgacaagacattctcagttatatactacttaaaaagtcatatgaaactacacagcggagatagaccgtactcgtgcgaacgatgcggcaaggcgttcacattgaacagccatctgacaatacacatgagaacgcacaccggtgaaaagccatacgcttgtaacaaatgcgacaagagatactcctctctcgctcacgtcaagtaccacatgaaaacgcacaccggagagaaggacttcgtctgcgatgtatgccagaaagcattctcagaaagcagccactggaagagtcatatgaaaatacacacgggtgtgaaggacttcgcgtgcgacatgtgcgataagaaattcatcggtcacaccaacctgaaactgcataagcggatacacacgggcgttaagccgcacgtctgcgatgtttgcgggaaagcgttcgcgcagaagtctgtattgataatacacgtacgaacacatacgggggagaaaccgttcgcgtgtcaccgatgtgggaaaacattcaccatgtccacgcatctacgaactcatatgcgtatacacacgggcgaaaagcctttcgcatgcgagatctgtgggaaaacgttcgctgaaaacgctcgtttgaaacgacacatgagaacgcacacgggcgagagaccgtacccatgtacaatgtgcgacaaatccttcgccgactacacaaacatgaagactcacctcgtcacccatactgggcaaaagccatacgcgtgcgatagatgcggtaagaccttcacgcagcaaggcactatgaagaagcatataaaaatagttcatctgaaagagagaccgcatgcgtgtaacatgtgccctaagacgtacgccaaacgacaggctttgaaagttcacgtgcgaacacataccggtgaaaGCGATAAAGTTAAATAA
Protein Sequence: MTQTAETALTQMFENGSKLTEDIPSMLFVKPHNLSMTVVMHTSFDDLEEAVKEELSESTDYFGDFDDGDKCVKDEARITFDPKTVIRIDLKDIKSENTETCPKNEESLFQNPNNLSSDKIYNTKEIPDETTDLCYFCPTCNKKHVTKKALSQHMRVHDPSRTYACDICEYRFNTKANLKTHKDNLHRTESETVACTVCHKLMNSQQILKRHMKIHSEKPPKIHACDRCELKFSDRSTLVRHKTTHTEGTPGKPHACQICDKTFSVIYYLKSHMKLHSGDRPYSCERCGKAFTLNSHLTIHMRTHTGEKPYACNKCDKRYSSLAHVKYHMKTHTGEKDFVCDVCQKAFSESSHWKSHMKIHTGVKDFACDMCDKKFIGHTNLKLHKRIHTGVKPHVCDVCGKAFAQKSVLIIHVRTHTGEKPFACHRCGKTFTMSTHLRTHMRIHTGEKPFACEICGKTFAENARLKRHMRTHTGERPYPCTMCDKSFADYTNMKTHLVTHTGQKPYACDRCGKTFTQQGTMKKHIKIVHLKERPHACNMCPKTYAKRQALKVHVRTHTGESDKVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00737672;
90% Identity: -
80% Identity: -