Basic Information

Insect: Ecliptopera silaceata
Gene Symbol: -
Assembly: GCA_932527285.1
Location: CAKOBM010000038.1:2788286-2791434[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0003 0.018 15.8 3.4 2 23 216 237 215 237 0.97

2 16 4.4e-08 2.6e-06 27.8 0.8 1 23 243 265 243 265 0.99

3 16 9.5e-07 5.7e-05 23.6 0.1 1 23 271 293 271 293 0.98

4 16 0.00048 0.029 15.1 3.8 1 23 299 321 299 321 0.97

5 16 1.2e-05 0.00072 20.1 1.9 1 23 326 349 326 349 0.97

6 16 0.00024 0.014 16.0 1.1 1 23 355 377 355 377 0.98

7 16 2.5e-07 1.5e-05 25.5 0.6 1 23 383 405 383 405 0.97

8 16 7.8e-07 4.6e-05 23.9 1.0 1 23 411 433 411 433 0.98

9 16 3.6e-06 0.00021 21.8 0.4 1 23 439 461 439 461 0.97

10 16 5e-06 0.0003 21.3 2.9 2 23 475 496 474 496 0.96

11 16 2.6e-07 1.6e-05 25.4 3.6 1 23 502 524 502 524 0.98

12 16 1.4e-06 8.4e-05 23.1 0.3 1 23 530 552 530 552 0.98

13 16 6.1e-06 0.00036 21.1 0.5 1 23 558 580 558 580 0.98

14 16 6.4e-06 0.00038 21.0 0.9 1 23 586 608 586 608 0.98

15 16 8.2e-06 0.00049 20.7 5.3 1 23 614 636 614 636 0.99

16 16 0.00021 0.012 16.3 0.4 1 20 642 661 642 663 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0003	0.018	15.8	3.4	2	23	216	237	215	237	0.97
2	16	4.4e-08	2.6e-06	27.8	0.8	1	23	243	265	243	265	0.99
3	16	9.5e-07	5.7e-05	23.6	0.1	1	23	271	293	271	293	0.98
4	16	0.00048	0.029	15.1	3.8	1	23	299	321	299	321	0.97
5	16	1.2e-05	0.00072	20.1	1.9	1	23	326	349	326	349	0.97
6	16	0.00024	0.014	16.0	1.1	1	23	355	377	355	377	0.98
7	16	2.5e-07	1.5e-05	25.5	0.6	1	23	383	405	383	405	0.97
8	16	7.8e-07	4.6e-05	23.9	1.0	1	23	411	433	411	433	0.98
9	16	3.6e-06	0.00021	21.8	0.4	1	23	439	461	439	461	0.97
10	16	5e-06	0.0003	21.3	2.9	2	23	475	496	474	496	0.96
11	16	2.6e-07	1.6e-05	25.4	3.6	1	23	502	524	502	524	0.98
12	16	1.4e-06	8.4e-05	23.1	0.3	1	23	530	552	530	552	0.98
13	16	6.1e-06	0.00036	21.1	0.5	1	23	558	580	558	580	0.98
14	16	6.4e-06	0.00038	21.0	0.9	1	23	586	608	586	608	0.98
15	16	8.2e-06	0.00049	20.7	5.3	1	23	614	636	614	636	0.99
16	16	0.00021	0.012	16.3	0.4	1	20	642	661	642	663	0.94

Sequence Information

Coding Sequence: ATGTTTACTGTGCCTCTGTGCAGGGTGTGTTTAGTTGACAATAATAAAATGCATTCGATTCGGAATTCGCAAATTCAAGATATATTCGAATCACTTGCTAGTACTAAGCTTATCACAGAAGATGGAAGACCTGAGACAATCTGCTACATATGCTACTCACAGCTGCGAAGATGTCATAAGTTCATGCAAGTGTCTCGAAAAGCAGAAAATATACTTACACAGCTGTATTGTAATGGCATAGAGATTTCACAGGAAACAGTTTCTTTATTTAATGGCGGTACACAACTTTCCTACAACCTCACAACACCGCCCGTGTCATTCCACAATATACCGTATGATAAAGACGCAGTGAAAGAAGAAGAAATTGATTATCCTGTAGAATTTGACAATGAATCTTTGCATGGAGATGTTAAGGTAGATGTGGCTGAAAATCTATCTGTTGTAAATGAAGCTTTGACAAATGAAATAAAAACAGAATACACCGAACAACACAGCAACTATATTTATGTACAGTCCAACATCGTGAAAGAGGAAAAACAGATTACTAGTCAATCTTCTATTCTGTTAGCTGAATTGATGAAACCAAGAAAAatacttaaaaatcgtgtaaaactacgtagacaacaaacaccacgaaacccgttgtcttgtcatttctgtgataagatattacgaaatgcgtatgagctacatcggcatgctagaactcatattgctgaaaaaccatatacttgcaccatttgtgggaaatcctattcggataaatcagtcttaaaacgccacatcaaaatacattccggagagagaccctatgattgcgcagtgtgcggcaaatcatttcctgaaaacagcgacgtaaaaaaacacatgagaatacacacgggtgaaaaaccattttcttgccgcgtgtgcgaaaaaaagttttatgaaaattaccaattaaaaaatcatatgcatggacatgccggagaaaaatatgtctgcgaaatgtgcgatagatcattctgcgaaaatattcaattaaaaagacatattagtagaatgcatgcaggggtcaaaccgtatgcatgtgaattctgtgacaagaagttttatgaaaataataggttgcaaagccatatcaaggtacacacaggcgaaaaaccattcgcttgtgatgaatgcaaaaaagcattctctgacaaacgtagcttgatcatccacatgagacgacacaccggcgaaaaaccgtattcctgtgaagtgtgcgacaaaaagtttgccactaacagcacgttgcgaaaccactcgagaattcatacagacacaaagctttatgcgtgtgacgcatgtgacaaaactttcaccgtttcagactacttgaaaagtcacatgaagatccacaatgtccgtagcacacaatttaatacaacatacgcgtgtgcctgtgaccgatgtggcaagacatttttcgataaaagtgttcttaaaaaacacatgagaatccacactggtgaaaaaccgtttgtatgtgacaaatgcgataagacatttgctgagaaatgtaacttaaagaggcacatcagaactcacacagaggaaaggccttatgcatgtgatatgtgtgataagtccttcgctgagagtggaaacttaaagacgcataaacgagtacacaccggtgaaaaaccgtactcctgcgatgcgtgcgggaaaggcttcgctcaatccaactcactgaagaaacatctcacaactcacactggagagagacagtattcttgtgtcatctgctacaagacatttacagctaagaatagtttgaagattcatatgagaattcacagtggcgagaaaccatattcatgcaatatctgcagtaaatcgttctatgagagcagttccttgtgtcgacataaaagaacacacacgggagaaaacccgtacacttgcattgaatgcaacaaGTCATTTAGTAGAAAAGCTTATTTAGAGCAACATTTGGCGTTTTGCAAACGTCACTAG
Protein Sequence: MFTVPLCRVCLVDNNKMHSIRNSQIQDIFESLASTKLITEDGRPETICYICYSQLRRCHKFMQVSRKAENILTQLYCNGIEISQETVSLFNGGTQLSYNLTTPPVSFHNIPYDKDAVKEEEIDYPVEFDNESLHGDVKVDVAENLSVVNEALTNEIKTEYTEQHSNYIYVQSNIVKEEKQITSQSSILLAELMKPRKILKNRVKLRRQQTPRNPLSCHFCDKILRNAYELHRHARTHIAEKPYTCTICGKSYSDKSVLKRHIKIHSGERPYDCAVCGKSFPENSDVKKHMRIHTGEKPFSCRVCEKKFYENYQLKNHMHGHAGEKYVCEMCDRSFCENIQLKRHISRMHAGVKPYACEFCDKKFYENNRLQSHIKVHTGEKPFACDECKKAFSDKRSLIIHMRRHTGEKPYSCEVCDKKFATNSTLRNHSRIHTDTKLYACDACDKTFTVSDYLKSHMKIHNVRSTQFNTTYACACDRCGKTFFDKSVLKKHMRIHTGEKPFVCDKCDKTFAEKCNLKRHIRTHTEERPYACDMCDKSFAESGNLKTHKRVHTGEKPYSCDACGKGFAQSNSLKKHLTTHTGERQYSCVICYKTFTAKNSLKIHMRIHSGEKPYSCNICSKSFYESSSLCRHKRTHTGENPYTCIECNKSFSRKAYLEQHLAFCKRH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -