Basic Information

Insect: Ecliptopera silaceata
Gene Symbol: -
Assembly: GCA_932527285.1
Location: CAKOBM010000038.1:2781705-2784586[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 7.2e-07 4.2e-05 24.0 0.7 1 23 151 173 151 173 0.98

2 17 2.7e-05 0.0016 19.0 2.9 1 23 178 200 178 200 0.97

3 17 1.2e-06 7e-05 23.3 1.5 1 23 205 227 205 227 0.98

4 17 5.5e-05 0.0032 18.1 0.3 1 23 230 253 230 253 0.93

5 17 0.00078 0.046 14.4 3.7 1 23 259 281 259 281 0.97

6 17 3.8e-07 2.2e-05 24.9 0.4 1 23 287 309 287 309 0.98

7 17 1.5e-06 8.8e-05 23.0 1.0 1 23 315 337 315 337 0.98

8 17 3.4e-05 0.002 18.7 0.6 1 23 343 365 343 365 0.97

9 17 2.5e-06 0.00015 22.3 2.8 2 23 376 397 375 397 0.97

10 17 1.4e-06 8.5e-05 23.1 1.0 1 23 403 425 403 425 0.98

11 17 1.4e-05 0.0008 20.0 0.2 1 23 431 453 431 453 0.98

12 17 1.3e-05 0.00076 20.1 0.3 1 23 459 481 459 481 0.97

13 17 2.1e-06 0.00012 22.5 0.5 1 23 487 509 487 509 0.97

14 17 9.3e-06 0.00055 20.5 0.8 1 23 515 537 515 537 0.98

15 17 0.00012 0.0072 17.0 0.4 1 23 543 565 543 565 0.98

16 17 1.3e-07 7.9e-06 26.3 1.2 1 23 571 593 571 593 0.99

17 17 9.4e-05 0.0056 17.3 0.4 1 20 599 618 599 619 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	7.2e-07	4.2e-05	24.0	0.7	1	23	151	173	151	173	0.98
2	17	2.7e-05	0.0016	19.0	2.9	1	23	178	200	178	200	0.97
3	17	1.2e-06	7e-05	23.3	1.5	1	23	205	227	205	227	0.98
4	17	5.5e-05	0.0032	18.1	0.3	1	23	230	253	230	253	0.93
5	17	0.00078	0.046	14.4	3.7	1	23	259	281	259	281	0.97
6	17	3.8e-07	2.2e-05	24.9	0.4	1	23	287	309	287	309	0.98
7	17	1.5e-06	8.8e-05	23.0	1.0	1	23	315	337	315	337	0.98
8	17	3.4e-05	0.002	18.7	0.6	1	23	343	365	343	365	0.97
9	17	2.5e-06	0.00015	22.3	2.8	2	23	376	397	375	397	0.97
10	17	1.4e-06	8.5e-05	23.1	1.0	1	23	403	425	403	425	0.98
11	17	1.4e-05	0.0008	20.0	0.2	1	23	431	453	431	453	0.98
12	17	1.3e-05	0.00076	20.1	0.3	1	23	459	481	459	481	0.97
13	17	2.1e-06	0.00012	22.5	0.5	1	23	487	509	487	509	0.97
14	17	9.3e-06	0.00055	20.5	0.8	1	23	515	537	515	537	0.98
15	17	0.00012	0.0072	17.0	0.4	1	23	543	565	543	565	0.98
16	17	1.3e-07	7.9e-06	26.3	1.2	1	23	571	593	571	593	0.99
17	17	9.4e-05	0.0056	17.3	0.4	1	20	599	618	599	619	0.94

Sequence Information

Coding Sequence: ATGTCAGTGGTACCTGTCTGCAGAGTATGTTTACTGGACAATGTTAGAATGGAATTTATTCAGAGTCCACAGCTACAGGAAGTATTTGAAATCCTTTCCAATAATATGGTGACTGAAGAAGCTGTCAAAGTGTTAAATGGAGGCAACAAACTTAACATAACAATGCCAACATTGCAACCCATGACTTTCCACAATTTCCCGTCGGAACTGGAGTTTAGCCTGGCAGTGAAGCAGGAACAGTATTTGACAGAAGGATATGTATTTGAGGATGCTCATGAAGATGTCAAATTGGATCCTGTTGAATTTGTTGAATCACCAGATTTAACAGAAATAAAAGAAGAAACCCAAGAATTTATACAATCAAGTCATGTTAAAAACGAACAATTAAATACTGACCAATCTTCTAGTGATCATGCTATAGCAAAGGCAAATATACACAAAGAAATGTCATATAACTGCACTATTTGTGGTAAATCGTATGCTAacagatatgtattaaaacggcacatcaaaatccattcattacaaaaacattcatgtgaagtatgcagtacatcattttcgaaaaacaatgagctcattaaacacatgagatttcactcagatgaaaaatttagttgtagtatatgtgataagaaattttatgataataataagttggaaaatcatatgaaaattcacactgggttcgcctgtgagttgtgtgacaaagtattcactggaaatcatcagttggaaatgcatataagtggtatgcatgcaggagttaagccatttgcttgtgaaatgtgctgtaaacggtttgcttttaagtctaaattagaacgacatgtacggacacacacggaagaaaaaccctatgcatgcagcatgtgtgataagaccttcgctgaaagtggaaacttaaaaacacaccaaagagtccataccggcttaaaaccatactcctgcgaaatatgccagaagcagttcacaactaacaacacattgaaaactcacatggcaatacatagtggtgagaaactattcgcctgcgataaatgcgacaaatcattcccagttatagaatacttgaaacggcacaagaaaatccacgaatcagaaacgaaaaagaccttttccagtacctgtgataggtgcggtaaaacatttgttgacaaatgtgctttaagaaaacacatgaaaatacacactgcggaaaaaatattcgtgtgtgatatgtgcgataagagatttgctgcgaagtctaaattgaaacggcatgtgagaagtcatacggaagagagaccttatgcttgtaaactgtgcgataaagcatttgctgaaactggaagcttaaaaacccatttgagagtgcacaccggcgagaaaccctattcctgcgacgcatgcggcaaaggcttcgctcaatccaactcattgaaaaaacacctcacaatacacacgggtgaaagacaatttgcctgcacagtctgttataaaagcttcgctgtaaagaacaacttaaccgatcacatgagaatacacagtggggagaaaccgtatatctgcagcatatgcagtcgaggcttcgctcaatctaattcgttgaagaaacatctcacaacgcacacgggcgaaaagcagttttcttgtgttatatgtttcaagagttttgcagctaaaaatagctggaaaatccatatgagggtacatagtggtgagaaaccgtatccgtgcaatgtgtgcagtaaatcatttatagatagcagcacattgaatagacacaagcgaacacacacgggagagaacccatacacttgcattgaatgcaacaaGTCATTTAGTAGAAAAGCTTATTTACAAAAACATGTCGCGTTTTGTAAACGTTAG
Protein Sequence: MSVVPVCRVCLLDNVRMEFIQSPQLQEVFEILSNNMVTEEAVKVLNGGNKLNITMPTLQPMTFHNFPSELEFSLAVKQEQYLTEGYVFEDAHEDVKLDPVEFVESPDLTEIKEETQEFIQSSHVKNEQLNTDQSSSDHAIAKANIHKEMSYNCTICGKSYANRYVLKRHIKIHSLQKHSCEVCSTSFSKNNELIKHMRFHSDEKFSCSICDKKFYDNNKLENHMKIHTGFACELCDKVFTGNHQLEMHISGMHAGVKPFACEMCCKRFAFKSKLERHVRTHTEEKPYACSMCDKTFAESGNLKTHQRVHTGLKPYSCEICQKQFTTNNTLKTHMAIHSGEKLFACDKCDKSFPVIEYLKRHKKIHESETKKTFSSTCDRCGKTFVDKCALRKHMKIHTAEKIFVCDMCDKRFAAKSKLKRHVRSHTEERPYACKLCDKAFAETGSLKTHLRVHTGEKPYSCDACGKGFAQSNSLKKHLTIHTGERQFACTVCYKSFAVKNNLTDHMRIHSGEKPYICSICSRGFAQSNSLKKHLTTHTGEKQFSCVICFKSFAAKNSWKIHMRVHSGEKPYPCNVCSKSFIDSSTLNRHKRTHTGENPYTCIECNKSFSRKAYLQKHVAFCKR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -