Basic Information

Gene Symbol
gl
Assembly
GCA_932527285.1
Location
CAKOBM010000002.1:3219018-3231030[+]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 7.8e-06 0.011 16.0 0.1 18 41 389 409 381 411 0.88
2 5 0.093 1.3e+02 2.9 0.2 18 41 417 437 413 439 0.85
3 5 0.013 19 5.7 0.9 16 38 443 466 433 466 0.77
4 5 0.00076 1.1 9.6 0.6 18 40 473 492 469 496 0.89
5 5 0.32 4.7e+02 1.2 1.2 18 40 501 520 493 522 0.82

Sequence Information

Coding Sequence
ATGGAGTACATGCCCAACAACCCTCAGTTCGCGGCGTGCTGCCAGCGCGGCCTGTGCTGCGACCCGCTGCAGCCGTGCTCGTGTCTCGATACCATCGAATTCCCAGAACACTGCTGCCAGCAAGAAAACGAGAACTGCTGTCCAGAAAATGGCGAAGACCTGAACGCATTGAGCGAGACCCTAAACACCTGCGATGTGTTGGAGGATGTGAGCGGCGGGGAGTGGACGGAGGATATGGGCTCATTCTCCCTGCCGTCTCTCGAGCTGGAGCCGCTACCATCGCTGTTCCCCTTCTCCCCTTGCCCCCCTTACAGCAGAAACAACCAGGCCGATTGCCGGGAGAGGGGTGGAGGGGAGGCAGCAGACGTCCTTCTATCGCTCAAACACGCCGTGGTACATGGCGACTGCAGCGAACCCGTACACCCGCAGATGATGGTGAACAGCGGAGCGGGCAGCGGTTACCCCTACTACGAGCACTATGGGGGCACCATCCCGCCTCTGTTCCCTACCATGAGCGTCAACGTGTCTATGAACATGACTATGCATGGGTGTCCTCCGGACCAGTTGTGCTCACAGGTACAATGGAACCAGAATCCGGCCACACCTTCAGTAAATGTAGTCTACCCTCAAGCGCAAAACGTCATCAGTCCTTCAACCTACCCCTCCGCTACTTACTCCTTCACAGCCGACTTCCGAACCCCGAACCAATCAGACCCACTAATAACAGCATCCTCAACCTTCAAACCACTCATCCAAAACCAAAAACCCAGCACTAACTACGCCATTTTCCAACAAAAACCGAACTTCGGACAAAAGAGTCAGCTGAAAAGACCTCCTTCTAAACTTTACGAAGCTCAGCCGAAGTTGTACGAAGCCTCGCCGAAGTTATACGATGTTTCTCCGAAGTTATACGATGCTTCTCCGAAGTTATACGATGCCTCGCCGAAGTTATACGATGCCTCGCCGAAGTTGTACGAACAGTCGAAGTTGTATGAAGCTCCGAAATTGTATGAACAAAAGGAGGGGATGGGAAACTACTCCATACTGAACCATCAAGGACAAATGCATCCACATGAGTACGCGTACGGATGTGGAGCAGTTTCTGGGAAAGTTCAGGTTGGCGCTCTTAGCGGCTGTTCTGATGATGATGAGCAGAAGCCAAACCTCTGCCGGATTTGTGGCAAGACTTACGCCAGACCCAGCACCCTGAAGACCCACCTCCGGACCCACTCCGGGGAGCGCCCTTACCGCTGCGGGGACTGCAACAAGAGCTTCTCACAGGCCGCCAACTTGACAGCACATGTCAGGACACATACAGGACAGAAACCTTTTCGGTGTCCGATCTGTGACAGAAGGTTCAGCCAGAGCTCCAGTGTTACCACACACATGAGGACGCATTCTGGCGAACGACCCTACCAATGTAGATCTTGCAAAAAGGCGTTTTCAGACAGTTCGACGCTCACTAAACATCTCAGAATACATTCTGGGGAAAAACCGTATCAATGCAAATTATGTTTGTTAAGGTTCTCGCAGTCAGGTAACCTGAACCGCCATATGAGGGTTCATGGCAACATGTCAGGGGGAATGCTGGGCTGA
Protein Sequence
MEYMPNNPQFAACCQRGLCCDPLQPCSCLDTIEFPEHCCQQENENCCPENGEDLNALSETLNTCDVLEDVSGGEWTEDMGSFSLPSLELEPLPSLFPFSPCPPYSRNNQADCRERGGGEAADVLLSLKHAVVHGDCSEPVHPQMMVNSGAGSGYPYYEHYGGTIPPLFPTMSVNVSMNMTMHGCPPDQLCSQVQWNQNPATPSVNVVYPQAQNVISPSTYPSATYSFTADFRTPNQSDPLITASSTFKPLIQNQKPSTNYAIFQQKPNFGQKSQLKRPPSKLYEAQPKLYEASPKLYDVSPKLYDASPKLYDASPKLYDASPKLYEQSKLYEAPKLYEQKEGMGNYSILNHQGQMHPHEYAYGCGAVSGKVQVGALSGCSDDDEQKPNLCRICGKTYARPSTLKTHLRTHSGERPYRCGDCNKSFSQAANLTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSGERPYQCRSCKKAFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSGNLNRHMRVHGNMSGGMLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00811230;
90% Identity
iTF_01336179;
80% Identity
iTF_00633005;