Esil008367.1
Basic Information
- Insect
- Ecliptopera silaceata
- Gene Symbol
- -
- Assembly
- GCA_932527285.1
- Location
- CAKOBM010000040.1:441272-442441[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-12 2.4e-09 37.0 0.1 1 41 9 49 9 53 0.93 2 2 9.8 7.5e+03 -3.0 0.0 17 23 126 132 123 132 0.84
Sequence Information
- Coding Sequence
- atgcctcccaaaagagcattatggtcagaagatgaTCTCATCTCAGCTGTTAGAGCAGTACAAAGAGGAACTCTGAGTACGTATAAGGCTGCGGAAAGATATAAAGTTCCTAGACGAACAATCAAAAATCATCTGCAGACTGGCATTTTAAAGAAAACTTTGGGTCGTAAACCTATATTGAGTCCGGAACAGGAAGCTGAACTTGCGAAAAGGATAATCAGGTATGCTGAAATAGGCTTGCCAGTCATACCGAGAATACTGCGTCGATTGGTGTATAAATATTGTGAGCAAAATGAGATAAAGCACAATTTTAGCGATGTTGGCAAATGCGCAGGTAAAGACTGGTTCAAGGCGTTCTTGAAAAGGAACCCTGAAATATCAGTGAGAAAAGCTCAATTTATGAACCCGGCTCGAGCCCAAAAACTTAATAGATTTATTGTTGATGATCACTTCGCAAAACTGAGGACTATCTATGAGAACCTTGACTTACATGGTCATCCCGAAAGAATTTATAATATGGATGAGAAGGGATGCCGTCTAACAATTCACCACCAGCAAAGCGTTTTGGCCAAAAAAGGTGCAAAAAGGGTTCATTTGCAGTCTTCTGAACACGCTGAAAGTGTTACAATTGCAGGATGTGTGAATGCACTCGGTACTGCCATACCGCCAATGGTCATATTTAAGGGCAAACGGTTAAATCCAGAACCATACGATAACTTGCCACCAGGATCATTGGTAGAAAAATCATCAAAAGGGTACATGACCAATGAACTTTTCAAGACATTTTTAAACCATCTGGCTAGATACAAAAGCGCGGGGTCATGCCTTTTGATATTTGATGGAGCAGCATGTCATTTAGATCTTTCCATTGTCGATATTTCCGACTCTCTTAACATTTCGCTGTACTGCTTACCATCAAACACAACTCACGAACTGCAGCCCCTCGATAAATCCGTTTATCGATCTTTTGAACATCACTGGGATGCTGAAGTGCTGTTATTCTTGGACCAAAACCGAGACAAAAAACTCACTAAAGCACGCTTTAATGTCATTCTTTCAAGAGTTTGGTCTAAATGTATGACACACAGTAATATGGCTTTAGCGCGACTGGCTTGTATCCCTTCAACCCACAGGCCATACCAGAAACGGCTTTTGCTCCATCAATTTTAA
- Protein Sequence
- MPPKRALWSEDDLISAVRAVQRGTLSTYKAAERYKVPRRTIKNHLQTGILKKTLGRKPILSPEQEAELAKRIIRYAEIGLPVIPRILRRLVYKYCEQNEIKHNFSDVGKCAGKDWFKAFLKRNPEISVRKAQFMNPARAQKLNRFIVDDHFAKLRTIYENLDLHGHPERIYNMDEKGCRLTIHHQQSVLAKKGAKRVHLQSSEHAESVTIAGCVNALGTAIPPMVIFKGKRLNPEPYDNLPPGSLVEKSSKGYMTNELFKTFLNHLARYKSAGSCLLIFDGAACHLDLSIVDISDSLNISLYCLPSNTTHELQPLDKSVYRSFEHHWDAEVLLFLDQNRDKKLTKARFNVILSRVWSKCMTHSNMALARLACIPSTHRPYQKRLLLHQF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01157585;
- 90% Identity
- -
- 80% Identity
- -